RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 CRYBG3Q68DQ2 2970 aa4.54□□□□□ -1.68
LIN28B-201ENST00000345080 KRTAP10-1P60331 282 aa4.53□□□□□ -1.68
LIN28B-201ENST00000345080 ASH1LQ9NR48 2969 aaKnown RBP4.52□□□□□ -1.69
LIN28B-201ENST00000345080 LRBAP50851 2863 aa4.52□□□□□ -1.69
LIN28B-201ENST00000345080 KRTAP11-1Q8IUC1 163 aa4.52□□□□□ -1.69
LIN28B-201ENST00000345080 ANKRD11Q6UB99 2663 aaPredicted RBP4.5□□□□□ -1.69
LIN28B-201ENST00000345080 HRNRQ86YZ3 2850 aaPredicted RBP4.5□□□□□ -1.69
LIN28B-201ENST00000345080 UTP20O75691 2785 aaKnown RBP4.5□□□□□ -1.69
LIN28B-201ENST00000345080 CELSR2Q9HCU4 2923 aa4.49□□□□□ -1.69
LIN28B-201ENST00000345080 ZNF469Q96JG9 3925 aaPredicted RBP4.47□□□□□ -1.69
LIN28B-201ENST00000345080 CFAP46Q8IYW2 2715 aa4.47□□□□□ -1.69
LIN28B-201ENST00000345080 TEP1Q99973 2627 aaKnown RBP4.47□□□□□ -1.69
LIN28B-201ENST00000345080 CELSR1Q9NYQ6 3014 aa4.46□□□□□ -1.7
LIN28B-201ENST00000345080 CEP295Q9C0D2 2601 aa4.46□□□□□ -1.7
LIN28B-201ENST00000345080 KRTAP10-2P60368 255 aa4.46□□□□□ -1.7
LIN28B-201ENST00000345080 NSD1Q96L73 2696 aaPredicted RBP4.45□□□□□ -1.7
LIN28B-201ENST00000345080 RPS29P62273 56 aaKnown RBP4.45□□□□□ -1.7
LIN28B-201ENST00000345080 HELZ2Q9BYK8 2649 aaKnown RBP4.44□□□□□ -1.7
LIN28B-201ENST00000345080 CUBNO60494 3623 aa4.44□□□□□ -1.7
LIN28B-201ENST00000345080 UNC79Q9P2D8 2635 aa4.44□□□□□ -1.7
LIN28B-201ENST00000345080 TACC2O95359 2948 aa4.44□□□□□ -1.7
LIN28B-201ENST00000345080 BAHCC1Q9P281 2608 aa4.43□□□□□ -1.7
LIN28B-201ENST00000345080 AKAP9Q99996 3911 aa4.43□□□□□ -1.7
LIN28B-201ENST00000345080 NBEAL1Q6ZS30 2694 aa4.43□□□□□ -1.7
LIN28B-201ENST00000345080 TENM4Q6N022 2769 aa4.41□□□□□ -1.7
LIN28B-201ENST00000345080 STAB1Q9NY15 2570 aa4.41□□□□□ -1.7
LIN28B-201ENST00000345080 NOTCH1P46531 2555 aa4.41□□□□□ -1.7
LIN28B-201ENST00000345080 IGSF10Q6WRI0 2623 aa4.41□□□□□ -1.7
LIN28B-201ENST00000345080 MAST4O15021 2626 aa4.4□□□□□ -1.7
LIN28B-201ENST00000345080 FBN2P35556 2912 aa4.39□□□□□ -1.71
LIN28B-201ENST00000345080 KMT2BQ9UMN6 2715 aaPredicted RBP4.38□□□□□ -1.71
LIN28B-201ENST00000345080 FLNCQ14315 2725 aa4.37□□□□□ -1.71
LIN28B-201ENST00000345080 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
LIN28B-201ENST00000345080 P0C880 135 aa4.36□□□□□ -1.71
LIN28B-201ENST00000345080 KRTAP13-1Q8IUC0 172 aa4.36□□□□□ -1.71
LIN28B-201ENST00000345080 UBR5O95071 2799 aaPredicted RBP4.35□□□□□ -1.71
LIN28B-201ENST00000345080 ITPR3Q14573 2671 aa4.34□□□□□ -1.71
LIN28B-201ENST00000345080 KRTAP7-1Q8IUC3 87 aa4.34□□□□□ -1.72
LIN28B-201ENST00000345080 KRTAP10-8P60410 259 aa4.32□□□□□ -1.72
LIN28B-201ENST00000345080 KRTAP1-5Q9BYS1 174 aa4.32□□□□□ -1.72
LIN28B-201ENST00000345080 H0YAA0 97 aa4.31□□□□□ -1.72
LIN28B-201ENST00000345080 CENPEQ02224 2701 aa4.27□□□□□ -1.73
LIN28B-201ENST00000345080 MAP1AP78559 2803 aaPredicted RBP4.27□□□□□ -1.73
LIN28B-201ENST00000345080 CHD6Q8TD26 2715 aa4.26□□□□□ -1.73
LIN28B-201ENST00000345080 TNP1P09430 55 aa4.25□□□□□ -1.73
LIN28B-201ENST00000345080 Q6ZRN7 208 aaPredicted RBP4.24□□□□□ -1.73
LIN28B-201ENST00000345080 COL6A5A8TX70 2615 aa4.24□□□□□ -1.73
LIN28B-201ENST00000345080 PDZD2O15018 2839 aa4.24□□□□□ -1.73
LIN28B-201ENST00000345080 ZANQ9Y493 2812 aa4.22□□□□□ -1.73
LIN28B-201ENST00000345080 GCN1Q92616 2671 aaKnown RBP4.22□□□□□ -1.73
LIN28B-201ENST00000345080 ANK3Q12955 4377 aaKnown RBP4.22□□□□□ -1.73
LIN28B-201ENST00000345080 KRTAP13-3Q3SY46 172 aa4.21□□□□□ -1.74
LIN28B-201ENST00000345080 APCP25054 2843 aa4.21□□□□□ -1.74
LIN28B-201ENST00000345080 PRO2289Q9P1D8 64 aa4.2□□□□□ -1.74
LIN28B-201ENST00000345080 MXRA5Q9NR99 2828 aa4.19□□□□□ -1.74
LIN28B-201ENST00000345080 TPRXLQ17RH7 258 aa4.18□□□□□ -1.74
LIN28B-201ENST00000345080 FLNAP21333 2647 aaKnown RBP4.17□□□□□ -1.74
LIN28B-201ENST00000345080 OTOGQ6ZRI0 2925 aa4.16□□□□□ -1.74
LIN28B-201ENST00000345080 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
LIN28B-201ENST00000345080 CMYA5Q8N3K9 4069 aa4.13□□□□□ -1.75
LIN28B-201ENST00000345080 ITPR2Q14571 2701 aa4.12□□□□□ -1.75
LIN28B-201ENST00000345080 KRTAP13-2Q52LG2 175 aa4.11□□□□□ -1.75
LIN28B-201ENST00000345080 A0A1B0GVY2 172 aa4.1□□□□□ -1.75
LIN28B-201ENST00000345080 NIPBLQ6KC79 2804 aaeCLIP4.09□□□□□ -1.75
LIN28B-201ENST00000345080 TEX15Q9BXT5 2789 aa4.09□□□□□ -1.76
LIN28B-201ENST00000345080 FLNBO75369 2602 aaKnown RBP4.08□□□□□ -1.76
LIN28B-201ENST00000345080 ANK2Q01484 3957 aa4.08□□□□□ -1.76
LIN28B-201ENST00000345080 NF1P21359 2839 aa4.08□□□□□ -1.76
LIN28B-201ENST00000345080 NBEAL2Q6ZNJ1 2754 aa4.07□□□□□ -1.76
LIN28B-201ENST00000345080 KRTAP10-10P60014 251 aa4.05□□□□□ -1.76
LIN28B-201ENST00000345080 INE1O15225 51 aa4.02□□□□□ -1.77
LIN28B-201ENST00000345080 SETXQ7Z333 2677 aaKnown RBP4.01□□□□□ -1.77
LIN28B-201ENST00000345080 TRRAPQ9Y4A5 3859 aa4.01□□□□□ -1.77
LIN28B-201ENST00000345080 DNAH3Q8TD57 4116 aa3.99□□□□□ -1.77
LIN28B-201ENST00000345080 KRTAP1-4P0C5Y4 121 aa3.97□□□□□ -1.77
LIN28B-201ENST00000345080 TENM1Q9UKZ4 2725 aa3.97□□□□□ -1.77
LIN28B-201ENST00000345080 VWFP04275 2813 aa3.97□□□□□ -1.77
LIN28B-201ENST00000345080 XP32Q5T750 250 aa3.96□□□□□ -1.77
LIN28B-201ENST00000345080 FBN1P35555 2871 aaKnown RBP3.96□□□□□ -1.78
LIN28B-201ENST00000345080 HIVEP1P15822 2718 aa3.94□□□□□ -1.78
LIN28B-201ENST00000345080 PKD1L1Q8TDX9 2849 aa3.91□□□□□ -1.78
LIN28B-201ENST00000345080 KRTAP12-2P59991 146 aa3.9□□□□□ -1.78
LIN28B-201ENST00000345080 DNHD1Q96M86 4753 aa3.89□□□□□ -1.79
LIN28B-201ENST00000345080 CSMD3Q7Z407 3707 aa3.87□□□□□ -1.79
LIN28B-201ENST00000345080 LYSTQ99698 3801 aa3.87□□□□□ -1.79
LIN28B-201ENST00000345080 KRTAP13-4Q3LI77 160 aa3.86□□□□□ -1.79
LIN28B-201ENST00000345080 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
LIN28B-201ENST00000345080 COL7A1Q02388 2944 aa3.82□□□□□ -1.8
LIN28B-201ENST00000345080 DNAH7Q8WXX0 4024 aa3.81□□□□□ -1.8
LIN28B-201ENST00000345080 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
LIN28B-201ENST00000345080 PRKDCP78527 4128 aaKnown RBP3.78□□□□□ -1.8
LIN28B-201ENST00000345080 TGP01266 2768 aa3.76□□□□□ -1.81
LIN28B-201ENST00000345080 KRTAP10-6P60371 365 aaPredicted RBP3.76□□□□□ -1.81
LIN28B-201ENST00000345080 DNAH1Q9P2D7 4330 aa3.75□□□□□ -1.81
LIN28B-201ENST00000345080 SRRM2Q9UQ35 2752 aaKnown RBP3.75□□□□□ -1.81
LIN28B-201ENST00000345080 KRTAP3-1Q9BYR8 98 aa3.75□□□□□ -1.81
LIN28B-201ENST00000345080 TENM3Q9P273 2699 aa3.75□□□□□ -1.81
LIN28B-201ENST00000345080 HUWE1Q7Z6Z7 4374 aaKnown RBP3.75□□□□□ -1.81
LIN28B-201ENST00000345080 DNAH9Q9NYC9 4486 aa3.74□□□□□ -1.81
LIN28B-201ENST00000345080 DYNC2H1Q8NCM8 4307 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms