RNA–Protein interactions for RNA: ENST00000345016.9

AP3D1-201, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AP3D1, Length 4,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-201ENST00000345016 DCHS2Q6V1P9 2916 aa9.87□□□□□ -0.83
AP3D1-201ENST00000345016 APCP25054 2843 aa9.87□□□□□ -0.83
AP3D1-201ENST00000345016 PANO1I0J062 215 aa9.85□□□□□ -0.83
AP3D1-201ENST00000345016 KMT2BQ9UMN6 2715 aaPredicted RBP9.85□□□□□ -0.83
AP3D1-201ENST00000345016 LINC00483Q53H64 154 aa9.84□□□□□ -0.83
AP3D1-201ENST00000345016 ROMO1P60602 79 aa9.84□□□□□ -0.83
AP3D1-201ENST00000345016 A0A087X002 238 aa9.83□□□□□ -0.84
AP3D1-201ENST00000345016 NOTCH2NLQ7Z3S9 236 aa9.83□□□□□ -0.84
AP3D1-201ENST00000345016 H1FX-AS1Q4G0G2 97 aa9.82□□□□□ -0.84
AP3D1-201ENST00000345016 R4GN34 69 aa9.82□□□□□ -0.84
AP3D1-201ENST00000345016 FBN2P35556 2912 aa9.8□□□□□ -0.84
AP3D1-201ENST00000345016 RELNP78509 3460 aa9.8□□□□□ -0.84
AP3D1-201ENST00000345016 A0A0A0MQY5 61 aa9.8□□□□□ -0.84
AP3D1-201ENST00000345016 ASB16-AS1Q495Z4 193 aa9.79□□□□□ -0.84
AP3D1-201ENST00000345016 SPATA8Q6RVD6 105 aa9.78□□□□□ -0.84
AP3D1-201ENST00000345016 HRNRQ86YZ3 2850 aaPredicted RBP9.78□□□□□ -0.84
AP3D1-201ENST00000345016 A6NN06 94 aa9.76□□□□□ -0.85
AP3D1-201ENST00000345016 LCE6AA0A183 80 aa9.75□□□□□ -0.85
AP3D1-201ENST00000345016 NIPBLQ6KC79 2804 aaeCLIP9.75□□□□□ -0.85
AP3D1-201ENST00000345016 TENM4Q6N022 2769 aa9.74□□□□□ -0.85
AP3D1-201ENST00000345016 A8MU10 97 aa9.74□□□□□ -0.85
AP3D1-201ENST00000345016 KRTAP10-1P60331 282 aa9.73□□□□□ -0.85
AP3D1-201ENST00000345016 KRTAP10-2P60368 255 aa9.72□□□□□ -0.85
AP3D1-201ENST00000345016 KRTAP11-1Q8IUC1 163 aa9.7□□□□□ -0.86
AP3D1-201ENST00000345016 ADM2Q7Z4H4 148 aa9.66□□□□□ -0.86
AP3D1-201ENST00000345016 KRTAP7-1Q8IUC3 87 aa9.66□□□□□ -0.86
AP3D1-201ENST00000345016 M0R2T5 61 aa9.65□□□□□ -0.86
AP3D1-201ENST00000345016 M0QZ58 72 aa9.64□□□□□ -0.87
AP3D1-201ENST00000345016 SMG1Q96Q15 3661 aaKnown RBP9.63□□□□□ -0.87
AP3D1-201ENST00000345016 KRTAP25-1Q3LHN0 102 aa9.56□□□□□ -0.88
AP3D1-201ENST00000345016 CSMD1Q96PZ7 3565 aa9.52□□□□□ -0.88
AP3D1-201ENST00000345016 SEC61BP60468 96 aaKnown RBP9.51□□□□□ -0.89
AP3D1-201ENST00000345016 Q5VSD8 79 aa9.49□□□□□ -0.89
AP3D1-201ENST00000345016 TENM3Q9P273 2699 aa9.46□□□□□ -0.89
AP3D1-201ENST00000345016 KRTAP16-1A8MUX0 517 aa9.46□□□□□ -0.9
AP3D1-201ENST00000345016 Q6ZRN7 208 aaPredicted RBP9.44□□□□□ -0.9
AP3D1-201ENST00000345016 KRTAP13-1Q8IUC0 172 aa9.44□□□□□ -0.9
AP3D1-201ENST00000345016 MXRA5Q9NR99 2828 aa9.43□□□□□ -0.9
AP3D1-201ENST00000345016 CELSR1Q9NYQ6 3014 aa9.4□□□□□ -0.9
AP3D1-201ENST00000345016 KRTAP13-2Q52LG2 175 aa9.39□□□□□ -0.91
AP3D1-201ENST00000345016 SVEP1Q4LDE5 3571 aa9.38□□□□□ -0.91
AP3D1-201ENST00000345016 NDUFAF8A1L188 74 aa9.38□□□□□ -0.91
AP3D1-201ENST00000345016 PKD1L1Q8TDX9 2849 aa9.33□□□□□ -0.92
AP3D1-201ENST00000345016 RPS29P62273 56 aaKnown RBP9.29□□□□□ -0.92
AP3D1-201ENST00000345016 CUBNO60494 3623 aa9.27□□□□□ -0.92
AP3D1-201ENST00000345016 A8MUU9 505 aa9.26□□□□□ -0.93
AP3D1-201ENST00000345016 TENM1Q9UKZ4 2725 aa9.22□□□□□ -0.93
AP3D1-201ENST00000345016 PLAC4Q8WY50 150 aa9.22□□□□□ -0.93
AP3D1-201ENST00000345016 FBN1P35555 2871 aaKnown RBP9.19□□□□□ -0.94
AP3D1-201ENST00000345016 SPENQ96T58 3664 aaKnown RBP9.19□□□□□ -0.94
AP3D1-201ENST00000345016 VWFP04275 2813 aa9.13□□□□□ -0.95
AP3D1-201ENST00000345016 C20orf166-AS1Q96NR2 134 aa9.1□□□□□ -0.95
AP3D1-201ENST00000345016 BSNQ9UPA5 3926 aa9.07□□□□□ -0.96
AP3D1-201ENST00000345016 TGP01266 2768 aa9.06□□□□□ -0.96
AP3D1-201ENST00000345016 PDZD2O15018 2839 aa9.05□□□□□ -0.96
AP3D1-201ENST00000345016 C10orf95Q9H7T3 257 aa9.03□□□□□ -0.96
AP3D1-201ENST00000345016 ZFHX3Q15911 3703 aa9.01□□□□□ -0.97
AP3D1-201ENST00000345016 SRRM2Q9UQ35 2752 aaKnown RBP9□□□□□ -0.97
AP3D1-201ENST00000345016 H0YAA0 97 aa8.99□□□□□ -0.97
AP3D1-201ENST00000345016 TENM2Q9NT68 2774 aa8.96□□□□□ -0.98
AP3D1-201ENST00000345016 TNP1P09430 55 aa8.94□□□□□ -0.98
AP3D1-201ENST00000345016 CSMD2Q7Z408 3487 aa8.93□□□□□ -0.98
AP3D1-201ENST00000345016 OTOGQ6ZRI0 2925 aa8.92□□□□□ -0.98
AP3D1-201ENST00000345016 KRTAP1-4P0C5Y4 121 aa8.9□□□□□ -0.98
AP3D1-201ENST00000345016 KRTAP21-3Q3LHN1 58 aa8.87□□□□□ -0.99
AP3D1-201ENST00000345016 NBPF19A0A087WUL8 3843 aa8.86□□□□□ -0.99
AP3D1-201ENST00000345016 P0C880 135 aa8.8□□□□□ -1
AP3D1-201ENST00000345016 PP632Q6XCG6 107 aa8.76□□□□□ -1.01
AP3D1-201ENST00000345016 XP32Q5T750 250 aa8.75□□□□□ -1.01
AP3D1-201ENST00000345016 KRTAP10-8P60410 259 aa8.71□□□□□ -1.02
AP3D1-201ENST00000345016 VPS13CQ709C8 3753 aa8.69□□□□□ -1.02
AP3D1-201ENST00000345016 KRTAP13-3Q3SY46 172 aa8.64□□□□□ -1.03
AP3D1-201ENST00000345016 A0A1B0GVY2 172 aa8.54□□□□□ -1.04
AP3D1-201ENST00000345016 ANK3Q12955 4377 aaKnown RBP8.48□□□□□ -1.05
AP3D1-201ENST00000345016 TRRAPQ9Y4A5 3859 aa8.48□□□□□ -1.05
AP3D1-201ENST00000345016 FBN3Q75N90 2809 aa8.45□□□□□ -1.06
AP3D1-201ENST00000345016 TPRXLQ17RH7 258 aa8.44□□□□□ -1.06
AP3D1-201ENST00000345016 COL7A1Q02388 2944 aa8.39□□□□□ -1.07
AP3D1-201ENST00000345016 KRTAP12-2P59991 146 aa8.36□□□□□ -1.07
AP3D1-201ENST00000345016 ZNF469Q96JG9 3925 aaPredicted RBP8.36□□□□□ -1.07
AP3D1-201ENST00000345016 KRTAP10-10P60014 251 aa8.28□□□□□ -1.08
AP3D1-201ENST00000345016 MEGF8Q7Z7M0 2845 aa8.27□□□□□ -1.09
AP3D1-201ENST00000345016 KRTAP12-1P59990 96 aa8.24□□□□□ -1.09
AP3D1-201ENST00000345016 KRTAP3-1Q9BYR8 98 aa8.23□□□□□ -1.09
AP3D1-201ENST00000345016 KRTAP13-4Q3LI77 160 aa8.13□□□□□ -1.11
AP3D1-201ENST00000345016 AKAP9Q99996 3911 aa8.13□□□□□ -1.11
AP3D1-201ENST00000345016 PRO2289Q9P1D8 64 aa8.1□□□□□ -1.11
AP3D1-201ENST00000345016 KRTAP10-6P60371 365 aaPredicted RBP8.04□□□□□ -1.12
AP3D1-201ENST00000345016 CSMD3Q7Z407 3707 aa7.9□□□□□ -1.15
AP3D1-201ENST00000345016 HUWE1Q7Z6Z7 4374 aaKnown RBP7.82□□□□□ -1.16
AP3D1-201ENST00000345016 KRTAP15-1Q3LI76 137 aa7.77□□□□□ -1.17
AP3D1-201ENST00000345016 KRTAP3-2Q9BYR7 98 aa7.73□□□□□ -1.17
AP3D1-201ENST00000345016 KRTAP3-3Q9BYR6 98 aa7.68□□□□□ -1.18
AP3D1-201ENST00000345016 DNAH10Q8IVF4 4471 aa7.54□□□□□ -1.2
AP3D1-201ENST00000345016 DNAH9Q9NYC9 4486 aa7.53□□□□□ -1.2
AP3D1-201ENST00000345016 MT1HL1P0DM35 61 aa7.48□□□□□ -1.21
AP3D1-201ENST00000345016 PLECQ15149 4684 aaKnown RBP7.48□□□□□ -1.21
AP3D1-201ENST00000345016 INE1O15225 51 aa7.47□□□□□ -1.21
AP3D1-201ENST00000345016 DNAH1Q9P2D7 4330 aa7.38□□□□□ -1.23
AP3D1-201ENST00000345016 DNHD1Q96M86 4753 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms