RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 TRBV7-4A0A0J9YYF1 115 aa6.67□□□□□ -1.34
SNCA-202ENST00000345009 TPRXLQ17RH7 258 aa6.67□□□□□ -1.34
SNCA-202ENST00000345009 ASB16-AS1Q495Z4 193 aa6.67□□□□□ -1.34
SNCA-202ENST00000345009 C5orf47Q569G3 176 aa6.67□□□□□ -1.34
SNCA-202ENST00000345009 H3BT86 120 aa6.66□□□□□ -1.34
SNCA-202ENST00000345009 K7ERU9 68 aa6.66□□□□□ -1.34
SNCA-202ENST00000345009 CCKP06307 115 aa6.66□□□□□ -1.34
SNCA-202ENST00000345009 PDE6GP18545 87 aa6.66□□□□□ -1.34
SNCA-202ENST00000345009 LRP2P98164 4655 aa6.65□□□□□ -1.34
SNCA-202ENST00000345009 A0A087WSZ3 146 aa6.64□□□□□ -1.35
SNCA-202ENST00000345009 C1orf195Q5TG92 126 aa6.64□□□□□ -1.35
SNCA-202ENST00000345009 GTF2H5Q6ZYL4 71 aa6.64□□□□□ -1.35
SNCA-202ENST00000345009 A0A1W2PNM2 257 aa6.63□□□□□ -1.35
SNCA-202ENST00000345009 LOC110117498A0A087WWA1 95 aa6.61□□□□□ -1.35
SNCA-202ENST00000345009 K7EP34 96 aa6.61□□□□□ -1.35
SNCA-202ENST00000345009 A0A1B0GW54 56 aa6.6□□□□□ -1.35
SNCA-202ENST00000345009 KRTAP13-3Q3SY46 172 aa6.6□□□□□ -1.35
SNCA-202ENST00000345009 OBSCN-AS1Q96MR7 158 aa6.59□□□□□ -1.35
SNCA-202ENST00000345009 C14orf132Q9NPU4 83 aa6.58□□□□□ -1.36
SNCA-202ENST00000345009 Q6ZQT0 140 aa6.57□□□□□ -1.36
SNCA-202ENST00000345009 F8W1H4 67 aa6.55□□□□□ -1.36
SNCA-202ENST00000345009 LPAP08519 4548 aa6.55□□□□□ -1.36
SNCA-202ENST00000345009 C9orf92A6NGG3 77 aa6.53□□□□□ -1.36
SNCA-202ENST00000345009 UBR4Q5T4S7 5183 aa6.53□□□□□ -1.36
SNCA-202ENST00000345009 IGKV4-1P06312 121 aa6.52□□□□□ -1.37
SNCA-202ENST00000345009 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
SNCA-202ENST00000345009 SIGMAR1Q99720 223 aa6.52□□□□□ -1.37
SNCA-202ENST00000345009 J3KT08 172 aa6.51□□□□□ -1.37
SNCA-202ENST00000345009 PRO0461Q9UI25 63 aa6.51□□□□□ -1.37
SNCA-202ENST00000345009 SEC61BP60468 96 aaKnown RBP6.5□□□□□ -1.37
SNCA-202ENST00000345009 Q96NJ1 140 aa6.5□□□□□ -1.37
SNCA-202ENST00000345009 LINC00472Q9H8W2 130 aa6.5□□□□□ -1.37
SNCA-202ENST00000345009 NREPQ16612 68 aa6.49□□□□□ -1.37
SNCA-202ENST00000345009 NDUFB1O75438 58 aa6.47□□□□□ -1.37
SNCA-202ENST00000345009 DEFB116Q30KQ4 102 aa6.47□□□□□ -1.37
SNCA-202ENST00000345009 SEC61GP60059 68 aa6.45□□□□□ -1.38
SNCA-202ENST00000345009 LINC00313P59037 77 aa6.44□□□□□ -1.38
SNCA-202ENST00000345009 ETDBQ3ZM63 59 aa6.44□□□□□ -1.38
SNCA-202ENST00000345009 J3QR89 54 aa6.43□□□□□ -1.38
SNCA-202ENST00000345009 IGHV6-1A0A0B4J1U7 121 aa6.42□□□□□ -1.38
SNCA-202ENST00000345009 A0A1B0GVX0 72 aa6.41□□□□□ -1.38
SNCA-202ENST00000345009 C8orf87E5RJ46 101 aa6.41□□□□□ -1.38
SNCA-202ENST00000345009 UBL5Q9BZL1 73 aa6.41□□□□□ -1.38
SNCA-202ENST00000345009 A8MWP4 228 aa6.4□□□□□ -1.38
SNCA-202ENST00000345009 BPY2O14599 106 aa6.4□□□□□ -1.38
SNCA-202ENST00000345009 RPL37P61927 97 aaKnown RBP6.4□□□□□ -1.38
SNCA-202ENST00000345009 RNF213Q63HN8 5207 aa6.4□□□□□ -1.39
SNCA-202ENST00000345009 DSCR10P59022 87 aa6.39□□□□□ -1.39
SNCA-202ENST00000345009 ATP11AUNQ6ZP68 121 aa6.39□□□□□ -1.39
SNCA-202ENST00000345009 Q75L30 129 aa6.39□□□□□ -1.39
SNCA-202ENST00000345009 A0A0U1RQV1 116 aa6.37□□□□□ -1.39
SNCA-202ENST00000345009 PCOTHQ58A44 107 aa6.37□□□□□ -1.39
SNCA-202ENST00000345009 Q6ZVQ6 151 aa6.37□□□□□ -1.39
SNCA-202ENST00000345009 SMIM20Q8N5G0 67 aa6.36□□□□□ -1.39
SNCA-202ENST00000345009 C20orf166-AS1Q96NR2 134 aa6.36□□□□□ -1.39
SNCA-202ENST00000345009 ACYP1P07311 99 aa6.35□□□□□ -1.39
SNCA-202ENST00000345009 PRR15Q8IV56 129 aa6.35□□□□□ -1.39
SNCA-202ENST00000345009 LINC00846Q9NV44 126 aa6.35□□□□□ -1.39
SNCA-202ENST00000345009 IGKV3D-7A0A0C4DH55 119 aa6.34□□□□□ -1.39
SNCA-202ENST00000345009 A8MUU9 505 aa6.34□□□□□ -1.39
SNCA-202ENST00000345009 V9GYY9 64 aa6.34□□□□□ -1.39
SNCA-202ENST00000345009 NOTCH2NLQ7Z3S9 236 aa6.33□□□□□ -1.4
SNCA-202ENST00000345009 C8orf17Q9NRJ1 99 aa6.32□□□□□ -1.4
SNCA-202ENST00000345009 MUC2Q02817 5179 aa6.3□□□□□ -1.4
SNCA-202ENST00000345009 FAM240AA0A1B0GVK7 77 aa6.3□□□□□ -1.4
SNCA-202ENST00000345009 KRTAP16-1A8MUX0 517 aa6.3□□□□□ -1.4
SNCA-202ENST00000345009 MUC17Q685J3 4493 aa6.28□□□□□ -1.4
SNCA-202ENST00000345009 K7EQZ3 153 aa6.28□□□□□ -1.4
SNCA-202ENST00000345009 CXCL6P80162 114 aa6.27□□□□□ -1.41
SNCA-202ENST00000345009 hDV103S1A0JD37 113 aa6.26□□□□□ -1.41
SNCA-202ENST00000345009 TMEM254Q8TBM7 123 aa6.26□□□□□ -1.41
SNCA-202ENST00000345009 Q8N9P0 234 aaPredicted RBP6.25□□□□□ -1.41
SNCA-202ENST00000345009 MRPL34Q9BQ48 92 aaKnown RBP6.25□□□□□ -1.41
SNCA-202ENST00000345009 ANAPC13Q9BS18 74 aa6.25□□□□□ -1.41
SNCA-202ENST00000345009 MMP24-AS1A0A0U1RRL7 71 aa6.24□□□□□ -1.41
SNCA-202ENST00000345009 Q8N9L7 120 aa6.23□□□□□ -1.41
SNCA-202ENST00000345009 NDUFS5O43920 106 aa6.22□□□□□ -1.41
SNCA-202ENST00000345009 ATP5EP2Q5VTU8 51 aa6.22□□□□□ -1.41
SNCA-202ENST00000345009 CASC2Q6XLA1 102 aa6.22□□□□□ -1.41
SNCA-202ENST00000345009 KRTAP4-1Q9BYQ7 146 aa6.22□□□□□ -1.41
SNCA-202ENST00000345009 ZCCHC13Q8WW36 166 aaKnown RBP6.21□□□□□ -1.42
SNCA-202ENST00000345009 HCG22E2RYF7 251 aa6.2□□□□□ -1.42
SNCA-202ENST00000345009 WFDC13Q8IUB5 93 aa6.2□□□□□ -1.42
SNCA-202ENST00000345009 PRO0628Q9UI54 55 aa6.19□□□□□ -1.42
SNCA-202ENST00000345009 RPS28P62857 69 aaKnown RBP6.18□□□□□ -1.42
SNCA-202ENST00000345009 LINC00643Q86TS7 51 aa6.18□□□□□ -1.42
SNCA-202ENST00000345009 COX6B2Q6YFQ2 88 aa6.15□□□□□ -1.42
SNCA-202ENST00000345009 HIST1H4AP62805 103 aaKnown RBP6.14□□□□□ -1.43
SNCA-202ENST00000345009 FAT4Q6V0I7 4981 aa6.14□□□□□ -1.43
SNCA-202ENST00000345009 TP53AIP1Q9HCN2 124 aa6.12□□□□□ -1.43
SNCA-202ENST00000345009 SPINK7P58062 85 aa6.11□□□□□ -1.43
SNCA-202ENST00000345009 RBM12B-AS1Q9P1G2 102 aa6.1□□□□□ -1.43
SNCA-202ENST00000345009 FAM236DA0A1B0GTK5 79 aa6.06□□□□□ -1.44
SNCA-202ENST00000345009 FAM236CP0DP71 79 aa6.06□□□□□ -1.44
SNCA-202ENST00000345009 KRTAP19-2Q3LHN2 52 aa6.04□□□□□ -1.44
SNCA-202ENST00000345009 Q5W150 140 aa6.04□□□□□ -1.44
SNCA-202ENST00000345009 IGKV2D-30A0A075B6S6 120 aa6.03□□□□□ -1.44
SNCA-202ENST00000345009 IGKV2-30P06310 120 aa6.03□□□□□ -1.44
SNCA-202ENST00000345009 C7orf65Q6ZTY9 151 aa6.03□□□□□ -1.44
SNCA-202ENST00000345009 HRES1P13985 223 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 698.1 ms