RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
MCPH1-201ENST00000344683 FLNAP21333 2647 aaKnown RBP4.86□□□□□ -1.63
MCPH1-201ENST00000344683 A8MUU9 505 aa4.86□□□□□ -1.63
MCPH1-201ENST00000344683 ATRQ13535 2644 aa4.85□□□□□ -1.63
MCPH1-201ENST00000344683 MAST4O15021 2626 aa4.85□□□□□ -1.63
MCPH1-201ENST00000344683 KRTAP4-16G5E9R7 235 aaPredicted RBP4.85□□□□□ -1.63
MCPH1-201ENST00000344683 RPS29P62273 56 aaKnown RBP4.85□□□□□ -1.63
MCPH1-201ENST00000344683 C10orf95Q9H7T3 257 aa4.85□□□□□ -1.63
MCPH1-201ENST00000344683 TNP1P09430 55 aa4.84□□□□□ -1.63
MCPH1-201ENST00000344683 KRTAP11-1Q8IUC1 163 aa4.83□□□□□ -1.64
MCPH1-201ENST00000344683 A8MU10 97 aa4.83□□□□□ -1.64
MCPH1-201ENST00000344683 CELSR2Q9HCU4 2923 aa4.82□□□□□ -1.64
MCPH1-201ENST00000344683 STAB1Q9NY15 2570 aa4.82□□□□□ -1.64
MCPH1-201ENST00000344683 NBEAL1Q6ZS30 2694 aa4.82□□□□□ -1.64
MCPH1-201ENST00000344683 KMT2BQ9UMN6 2715 aaPredicted RBP4.82□□□□□ -1.64
MCPH1-201ENST00000344683 KRTAP1-3Q8IUG1 177 aa4.8□□□□□ -1.64
MCPH1-201ENST00000344683 KRTAP1-1Q07627 177 aa4.79□□□□□ -1.64
MCPH1-201ENST00000344683 ITPR3Q14573 2671 aa4.76□□□□□ -1.65
MCPH1-201ENST00000344683 NOTCH2NLQ7Z3S9 236 aa4.76□□□□□ -1.65
MCPH1-201ENST00000344683 Q5VSD8 79 aa4.76□□□□□ -1.65
MCPH1-201ENST00000344683 HECTD1Q9ULT8 2610 aa4.75□□□□□ -1.65
MCPH1-201ENST00000344683 CFAP46Q8IYW2 2715 aa4.75□□□□□ -1.65
MCPH1-201ENST00000344683 KRTAP21-3Q3LHN1 58 aa4.75□□□□□ -1.65
MCPH1-201ENST00000344683 HELZ2Q9BYK8 2649 aaKnown RBP4.74□□□□□ -1.65
MCPH1-201ENST00000344683 UTP20O75691 2785 aaKnown RBP4.72□□□□□ -1.65
MCPH1-201ENST00000344683 NOTCH1P46531 2555 aa4.71□□□□□ -1.66
MCPH1-201ENST00000344683 UNC79Q9P2D8 2635 aa4.7□□□□□ -1.66
MCPH1-201ENST00000344683 MAP1AP78559 2803 aaPredicted RBP4.7□□□□□ -1.66
MCPH1-201ENST00000344683 ITPR1Q14643 2758 aa4.69□□□□□ -1.66
MCPH1-201ENST00000344683 KRTAP1-5Q9BYS1 174 aa4.68□□□□□ -1.66
MCPH1-201ENST00000344683 KRTAP10-1P60331 282 aa4.67□□□□□ -1.66
MCPH1-201ENST00000344683 P0C880 135 aa4.67□□□□□ -1.66
MCPH1-201ENST00000344683 CHD6Q8TD26 2715 aa4.66□□□□□ -1.66
MCPH1-201ENST00000344683 GCN1Q92616 2671 aaKnown RBP4.65□□□□□ -1.66
MCPH1-201ENST00000344683 KRTAP10-2P60368 255 aa4.62□□□□□ -1.67
MCPH1-201ENST00000344683 CMYA5Q8N3K9 4069 aa4.62□□□□□ -1.67
MCPH1-201ENST00000344683 ANK2Q01484 3957 aa4.61□□□□□ -1.67
MCPH1-201ENST00000344683 NSD1Q96L73 2696 aaPredicted RBP4.61□□□□□ -1.67
MCPH1-201ENST00000344683 Q6ZRN7 208 aaPredicted RBP4.6□□□□□ -1.67
MCPH1-201ENST00000344683 COL6A5A8TX70 2615 aa4.6□□□□□ -1.67
MCPH1-201ENST00000344683 MXRA5Q9NR99 2828 aa4.58□□□□□ -1.68
MCPH1-201ENST00000344683 APCP25054 2843 aa4.58□□□□□ -1.68
MCPH1-201ENST00000344683 H0YAA0 97 aa4.58□□□□□ -1.68
MCPH1-201ENST00000344683 TEX15Q9BXT5 2789 aa4.58□□□□□ -1.68
MCPH1-201ENST00000344683 STAB2Q8WWQ8 2551 aa4.57□□□□□ -1.68
MCPH1-201ENST00000344683 TEP1Q99973 2627 aaKnown RBP4.57□□□□□ -1.68
MCPH1-201ENST00000344683 ZANQ9Y493 2812 aa4.57□□□□□ -1.68
MCPH1-201ENST00000344683 ANK3Q12955 4377 aaKnown RBP4.56□□□□□ -1.68
MCPH1-201ENST00000344683 KRTAP13-1Q8IUC0 172 aa4.55□□□□□ -1.68
MCPH1-201ENST00000344683 IGSF10Q6WRI0 2623 aa4.55□□□□□ -1.68
MCPH1-201ENST00000344683 FLNCQ14315 2725 aa4.54□□□□□ -1.68
MCPH1-201ENST00000344683 FBN2P35556 2912 aa4.53□□□□□ -1.68
MCPH1-201ENST00000344683 KRTAP13-2Q52LG2 175 aa4.49□□□□□ -1.69
MCPH1-201ENST00000344683 SETXQ7Z333 2677 aaKnown RBP4.49□□□□□ -1.69
MCPH1-201ENST00000344683 KRTAP10-8P60410 259 aa4.49□□□□□ -1.69
MCPH1-201ENST00000344683 PRO2289Q9P1D8 64 aa4.47□□□□□ -1.69
MCPH1-201ENST00000344683 NF1P21359 2839 aa4.46□□□□□ -1.69
MCPH1-201ENST00000344683 TRRAPQ9Y4A5 3859 aa4.46□□□□□ -1.7
MCPH1-201ENST00000344683 KRTAP7-1Q8IUC3 87 aa4.46□□□□□ -1.7
MCPH1-201ENST00000344683 UBR5O95071 2799 aaPredicted RBP4.45□□□□□ -1.7
MCPH1-201ENST00000344683 ITPR2Q14571 2701 aa4.45□□□□□ -1.7
MCPH1-201ENST00000344683 LYSTQ99698 3801 aa4.43□□□□□ -1.7
MCPH1-201ENST00000344683 NIPBLQ6KC79 2804 aaeCLIP4.42□□□□□ -1.7
MCPH1-201ENST00000344683 TENM4Q6N022 2769 aa4.42□□□□□ -1.7
MCPH1-201ENST00000344683 CSMD3Q7Z407 3707 aa4.4□□□□□ -1.7
MCPH1-201ENST00000344683 NBEAL2Q6ZNJ1 2754 aa4.39□□□□□ -1.71
MCPH1-201ENST00000344683 PDZD2O15018 2839 aa4.39□□□□□ -1.71
MCPH1-201ENST00000344683 DNAH3Q8TD57 4116 aa4.36□□□□□ -1.71
MCPH1-201ENST00000344683 BAHCC1Q9P281 2608 aa4.34□□□□□ -1.71
MCPH1-201ENST00000344683 INE1O15225 51 aa4.33□□□□□ -1.72
MCPH1-201ENST00000344683 XP32Q5T750 250 aa4.32□□□□□ -1.72
MCPH1-201ENST00000344683 DNAH7Q8WXX0 4024 aa4.31□□□□□ -1.72
MCPH1-201ENST00000344683 KRTAP13-4Q3LI77 160 aa4.29□□□□□ -1.72
MCPH1-201ENST00000344683 TPRXLQ17RH7 258 aa4.27□□□□□ -1.73
MCPH1-201ENST00000344683 KRTAP12-2P59991 146 aa4.24□□□□□ -1.73
MCPH1-201ENST00000344683 HIVEP1P15822 2718 aa4.24□□□□□ -1.73
MCPH1-201ENST00000344683 VWFP04275 2813 aa4.22□□□□□ -1.73
MCPH1-201ENST00000344683 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
MCPH1-201ENST00000344683 A0A1B0GVY2 172 aa4.21□□□□□ -1.73
MCPH1-201ENST00000344683 OTOGQ6ZRI0 2925 aa4.21□□□□□ -1.74
MCPH1-201ENST00000344683 KRTAP1-4P0C5Y4 121 aa4.2□□□□□ -1.74
MCPH1-201ENST00000344683 DNAH1Q9P2D7 4330 aa4.19□□□□□ -1.74
MCPH1-201ENST00000344683 FRAS1Q86XX4 4008 aa4.19□□□□□ -1.74
MCPH1-201ENST00000344683 PKD1L1Q8TDX9 2849 aa4.18□□□□□ -1.74
MCPH1-201ENST00000344683 TGP01266 2768 aa4.17□□□□□ -1.74
MCPH1-201ENST00000344683 TENM1Q9UKZ4 2725 aa4.17□□□□□ -1.74
MCPH1-201ENST00000344683 KRTAP13-3Q3SY46 172 aa4.15□□□□□ -1.74
MCPH1-201ENST00000344683 HECTD4Q9Y4D8 3996 aa4.15□□□□□ -1.75
MCPH1-201ENST00000344683 KRTAP12-1P59990 96 aa4.15□□□□□ -1.75
MCPH1-201ENST00000344683 HUWE1Q7Z6Z7 4374 aaKnown RBP4.12□□□□□ -1.75
MCPH1-201ENST00000344683 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
MCPH1-201ENST00000344683 KMT2AQ03164 3969 aa4.11□□□□□ -1.75
MCPH1-201ENST00000344683 TENM3Q9P273 2699 aa4.1□□□□□ -1.75
MCPH1-201ENST00000344683 DNAH9Q9NYC9 4486 aa4.09□□□□□ -1.75
MCPH1-201ENST00000344683 DNAH10Q8IVF4 4471 aa4.09□□□□□ -1.75
MCPH1-201ENST00000344683 PRKDCP78527 4128 aaKnown RBP4.07□□□□□ -1.76
MCPH1-201ENST00000344683 COL7A1Q02388 2944 aa4.07□□□□□ -1.76
MCPH1-201ENST00000344683 DYNC2H1Q8NCM8 4307 aaKnown RBP4.06□□□□□ -1.76
MCPH1-201ENST00000344683 FBN1P35555 2871 aaKnown RBP4.05□□□□□ -1.76
MCPH1-201ENST00000344683 ALMS1Q8TCU4 4167 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms