RNA–Protein interactions for RNA: ENST00000342833.3

FOXD4L3-201, Transcript of forkhead box D4 like 3, humanhuman

APPRIS P1 BASIC

Gene FOXD4L3, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L3-201ENST00000342833 ZCCHC13Q8WW36 166 aaKnown RBP12.01□□□□□ -0.49
FOXD4L3-201ENST00000342833 MP68P56378 58 aa11.99□□□□□ -0.49
FOXD4L3-201ENST00000342833 Q5XG85 94 aa11.98□□□□□ -0.49
FOXD4L3-201ENST00000342833 APOBP04114 4563 aaKnown RBP11.96□□□□□ -0.5
FOXD4L3-201ENST00000342833 NOTCH2NLQ7Z3S9 236 aa11.96□□□□□ -0.5
FOXD4L3-201ENST00000342833 TYMSOSQ8TAI1 123 aa11.96□□□□□ -0.5
FOXD4L3-201ENST00000342833 H0Y9P7 68 aa11.95□□□□□ -0.5
FOXD4L3-201ENST00000342833 ATP5EP56381 51 aaPredicted RBP11.94□□□□□ -0.5
FOXD4L3-201ENST00000342833 MRPL34Q9BQ48 92 aaKnown RBP11.93□□□□□ -0.5
FOXD4L3-201ENST00000342833 LINC00208Q96KT6 92 aa11.93□□□□□ -0.5
FOXD4L3-201ENST00000342833 TP53AIP1Q9HCN2 124 aa11.93□□□□□ -0.5
FOXD4L3-201ENST00000342833 LIMD2Q9BT23 127 aa11.92□□□□□ -0.5
FOXD4L3-201ENST00000342833 C1orf195Q5TG92 126 aa11.91□□□□□ -0.5
FOXD4L3-201ENST00000342833 TRAV22A0A0B4J277 110 aa11.91□□□□□ -0.5
FOXD4L3-201ENST00000342833 H3BPC8 53 aa11.91□□□□□ -0.5
FOXD4L3-201ENST00000342833 C4orf48Q5BLP8 95 aa11.89□□□□□ -0.51
FOXD4L3-201ENST00000342833 NDUFS5O43920 106 aa11.89□□□□□ -0.51
FOXD4L3-201ENST00000342833 KRTAP10-4P60372 401 aaPredicted RBP11.88□□□□□ -0.51
FOXD4L3-201ENST00000342833 OXTP01178 125 aa11.87□□□□□ -0.51
FOXD4L3-201ENST00000342833 SERP1Q9Y6X1 66 aa11.87□□□□□ -0.51
FOXD4L3-201ENST00000342833 PRR26Q8N8Z3 221 aa11.87□□□□□ -0.51
FOXD4L3-201ENST00000342833 FAT1Q14517 4588 aa11.86□□□□□ -0.51
FOXD4L3-201ENST00000342833 C8orf87E5RJ46 101 aa11.86□□□□□ -0.51
FOXD4L3-201ENST00000342833 SPINK1P00995 79 aa11.86□□□□□ -0.51
FOXD4L3-201ENST00000342833 C1orf64Q8NEQ6 169 aa11.84□□□□□ -0.51
FOXD4L3-201ENST00000342833 LINC00313P59037 77 aa11.8□□□□□ -0.52
FOXD4L3-201ENST00000342833 LINC00304Q8N9R0 145 aa11.8□□□□□ -0.52
FOXD4L3-201ENST00000342833 RPS29P62273 56 aaKnown RBP11.76□□□□□ -0.53
FOXD4L3-201ENST00000342833 SPAG11AQ6PDA7 123 aa11.76□□□□□ -0.53
FOXD4L3-201ENST00000342833 RYR3Q15413 4870 aa11.71□□□□□ -0.53
FOXD4L3-201ENST00000342833 PRR4Q16378 134 aa11.69□□□□□ -0.54
FOXD4L3-201ENST00000342833 CYP4F30PQ9H0H9 118 aa11.69□□□□□ -0.54
FOXD4L3-201ENST00000342833 Q8N9P0 234 aaPredicted RBP11.69□□□□□ -0.54
FOXD4L3-201ENST00000342833 SPANXA2-OT1Q8N9U9 137 aa11.69□□□□□ -0.54
FOXD4L3-201ENST00000342833 Q5W150 140 aa11.67□□□□□ -0.54
FOXD4L3-201ENST00000342833 FAM229AH3BQW9 127 aa11.67□□□□□ -0.54
FOXD4L3-201ENST00000342833 KRTAP16-1A8MUX0 517 aa11.66□□□□□ -0.54
FOXD4L3-201ENST00000342833 KRTAP13-3Q3SY46 172 aa11.66□□□□□ -0.54
FOXD4L3-201ENST00000342833 PKHD1L1Q86WI1 4243 aa11.66□□□□□ -0.54
FOXD4L3-201ENST00000342833 PCOTHQ58A44 107 aa11.64□□□□□ -0.55
FOXD4L3-201ENST00000342833 SMIM26A0A096LP01 95 aa11.62□□□□□ -0.55
FOXD4L3-201ENST00000342833 LOC101927531A0A1B0GV80 90 aa11.6□□□□□ -0.55
FOXD4L3-201ENST00000342833 HSPG2P98160 4391 aa11.59□□□□□ -0.55
FOXD4L3-201ENST00000342833 IGLV7-46A0A075B6I9 117 aa11.57□□□□□ -0.56
FOXD4L3-201ENST00000342833 Q5VSD8 79 aa11.57□□□□□ -0.56
FOXD4L3-201ENST00000342833 FP248Q71RG6 208 aaPredicted RBP11.55□□□□□ -0.56
FOXD4L3-201ENST00000342833 RETNLBQ9BQ08 111 aa11.52□□□□□ -0.56
FOXD4L3-201ENST00000342833 C4orf26Q17RF5 130 aa11.48□□□□□ -0.57
FOXD4L3-201ENST00000342833 RYR1P21817 5038 aa11.47□□□□□ -0.57
FOXD4L3-201ENST00000342833 IGKV2-30P06310 120 aa11.43□□□□□ -0.58
FOXD4L3-201ENST00000342833 LRP1Q07954 4544 aaKnown RBP11.42□□□□□ -0.58
FOXD4L3-201ENST00000342833 KRTAP10-8P60410 259 aa11.42□□□□□ -0.58
FOXD4L3-201ENST00000342833 Q8N1X5 172 aa11.42□□□□□ -0.58
FOXD4L3-201ENST00000342833 MPLKIPQ8TAP9 179 aa11.41□□□□□ -0.58
FOXD4L3-201ENST00000342833 FLG2Q5D862 2391 aaPredicted RBP11.41□□□□□ -0.58
FOXD4L3-201ENST00000342833 TNXBP22105 4242 aa11.4□□□□□ -0.58
FOXD4L3-201ENST00000342833 KRTAP17-1Q9BYP8 105 aa11.4□□□□□ -0.59
FOXD4L3-201ENST00000342833 C9orf92A6NGG3 77 aa11.39□□□□□ -0.59
FOXD4L3-201ENST00000342833 COA5Q86WW8 74 aa11.38□□□□□ -0.59
FOXD4L3-201ENST00000342833 KIAA1109Q2LD37 5005 aa11.36□□□□□ -0.59
FOXD4L3-201ENST00000342833 HRES1P13985 223 aa11.36□□□□□ -0.59
FOXD4L3-201ENST00000342833 IGKV2D-30A0A075B6S6 120 aa11.33□□□□□ -0.6
FOXD4L3-201ENST00000342833 C20orf166-AS1Q96NR2 134 aa11.31□□□□□ -0.6
FOXD4L3-201ENST00000342833 Q1T7F1 81 aa11.31□□□□□ -0.6
FOXD4L3-201ENST00000342833 A8MUU9 505 aa11.3□□□□□ -0.6
FOXD4L3-201ENST00000342833 EPPK1P58107 5090 aaKnown RBP11.29□□□□□ -0.6
FOXD4L3-201ENST00000342833 FAT3Q8TDW7 4589 aa11.28□□□□□ -0.6
FOXD4L3-201ENST00000342833 DMAC1Q96GE9 116 aa11.25□□□□□ -0.61
FOXD4L3-201ENST00000342833 C7orf65Q6ZTY9 151 aa11.23□□□□□ -0.61
FOXD4L3-201ENST00000342833 ACYP2P14621 99 aa11.23□□□□□ -0.61
FOXD4L3-201ENST00000342833 V9GYY9 64 aa11.21□□□□□ -0.61
FOXD4L3-201ENST00000342833 MYCBP2O75592 4640 aa11.19□□□□□ -0.62
FOXD4L3-201ENST00000342833 DMBT1Q9UGM3 2413 aaPredicted RBP11.18□□□□□ -0.62
FOXD4L3-201ENST00000342833 MT1HL1P0DM35 61 aa11.18□□□□□ -0.62
FOXD4L3-201ENST00000342833 Q75L30 129 aa11.16□□□□□ -0.62
FOXD4L3-201ENST00000342833 PSPHP1O15172 72 aa11.13□□□□□ -0.63
FOXD4L3-201ENST00000342833 A8MUN3 132 aa11.08□□□□□ -0.64
FOXD4L3-201ENST00000342833 CHKB-CPT1BH3BT56 60 aa11.08□□□□□ -0.64
FOXD4L3-201ENST00000342833 PRR15LQ9BU68 103 aa11.03□□□□□ -0.64
FOXD4L3-201ENST00000342833 SPINK7P58062 85 aa11.02□□□□□ -0.64
FOXD4L3-201ENST00000342833 LINC01558Q9Y6Z2 57 aa11.02□□□□□ -0.65
FOXD4L3-201ENST00000342833 Q5VV11 94 aa11.01□□□□□ -0.65
FOXD4L3-201ENST00000342833 ATP11AUNQ6ZP68 121 aa10.99□□□□□ -0.65
FOXD4L3-201ENST00000342833 XP32Q5T750 250 aa10.98□□□□□ -0.65
FOXD4L3-201ENST00000342833 KRTAP4-5Q9BYR2 181 aa10.98□□□□□ -0.65
FOXD4L3-201ENST00000342833 RPL37P61927 97 aaKnown RBP10.97□□□□□ -0.65
FOXD4L3-201ENST00000342833 BRK1Q8WUW1 75 aa10.96□□□□□ -0.65
FOXD4L3-201ENST00000342833 PRO0628Q9UI54 55 aa10.96□□□□□ -0.66
FOXD4L3-201ENST00000342833 KRTAP3-1Q9BYR8 98 aa10.85□□□□□ -0.67
FOXD4L3-201ENST00000342833 TPRXLQ17RH7 258 aa10.82□□□□□ -0.68
FOXD4L3-201ENST00000342833 COX6B2Q6YFQ2 88 aa10.8□□□□□ -0.68
FOXD4L3-201ENST00000342833 A6NED7 52 aa10.77□□□□□ -0.68
FOXD4L3-201ENST00000342833 ABCA13Q86UQ4 5058 aa10.76□□□□□ -0.69
FOXD4L3-201ENST00000342833 A0A1B0GU69 56 aa10.75□□□□□ -0.69
FOXD4L3-201ENST00000342833 SPTSSBQ8NFR3 76 aa10.72□□□□□ -0.69
FOXD4L3-201ENST00000342833 A8MU10 97 aa10.67□□□□□ -0.7
FOXD4L3-201ENST00000342833 J3QL48 77 aa10.65□□□□□ -0.7
FOXD4L3-201ENST00000342833 LCA10Q71F78 164 aa10.65□□□□□ -0.71
FOXD4L3-201ENST00000342833 LRP2P98164 4655 aa10.64□□□□□ -0.71
FOXD4L3-201ENST00000342833 HERC2O95714 4834 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms