RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 NDUFS5O43920 106 aa8.58□□□□□ -1.04
TDP2-201ENST00000341060 A0A087X002 238 aa8.57□□□□□ -1.04
TDP2-201ENST00000341060 NOTCH2NLQ7Z3S9 236 aa8.57□□□□□ -1.04
TDP2-201ENST00000341060 CD164Q04900 197 aa8.57□□□□□ -1.04
TDP2-201ENST00000341060 V9GYY9 64 aa8.57□□□□□ -1.04
TDP2-201ENST00000341060 SACSQ9NZJ4 4579 aa8.55□□□□□ -1.04
TDP2-201ENST00000341060 PCOTHQ58A44 107 aa8.55□□□□□ -1.04
TDP2-201ENST00000341060 CIRBP-AS1Q8TBR5 109 aa8.55□□□□□ -1.04
TDP2-201ENST00000341060 PSPHP1O15172 72 aa8.54□□□□□ -1.04
TDP2-201ENST00000341060 DNAH5Q8TE73 4624 aa8.54□□□□□ -1.04
TDP2-201ENST00000341060 DNAH11Q96DT5 4516 aa8.54□□□□□ -1.04
TDP2-201ENST00000341060 KRTAP10-2P60368 255 aa8.53□□□□□ -1.04
TDP2-201ENST00000341060 SPINK6Q6UWN8 80 aa8.53□□□□□ -1.04
TDP2-201ENST00000341060 SSBP3-AS1Q7Z2R9 100 aa8.53□□□□□ -1.04
TDP2-201ENST00000341060 KMT2CQ8NEZ4 4911 aaKnown RBP8.51□□□□□ -1.05
TDP2-201ENST00000341060 C1orf195Q5TG92 126 aa8.51□□□□□ -1.05
TDP2-201ENST00000341060 COA5Q86WW8 74 aa8.51□□□□□ -1.05
TDP2-201ENST00000341060 Q8N9P0 234 aaPredicted RBP8.5□□□□□ -1.05
TDP2-201ENST00000341060 A8MUN3 132 aa8.48□□□□□ -1.05
TDP2-201ENST00000341060 Q6ZSA8 131 aa8.48□□□□□ -1.05
TDP2-201ENST00000341060 LIMD2Q9BT23 127 aa8.48□□□□□ -1.05
TDP2-201ENST00000341060 FAT2Q9NYQ8 4349 aa8.48□□□□□ -1.05
TDP2-201ENST00000341060 PKD1P98161 4303 aa8.47□□□□□ -1.05
TDP2-201ENST00000341060 LOC101927531A0A1B0GV80 90 aa8.46□□□□□ -1.06
TDP2-201ENST00000341060 KRTAP13-3Q3SY46 172 aa8.46□□□□□ -1.06
TDP2-201ENST00000341060 C8orf87E5RJ46 101 aa8.45□□□□□ -1.06
TDP2-201ENST00000341060 Q5VV11 94 aa8.45□□□□□ -1.06
TDP2-201ENST00000341060 Q5W150 140 aa8.44□□□□□ -1.06
TDP2-201ENST00000341060 KRTAP13-2Q52LG2 175 aa8.43□□□□□ -1.06
TDP2-201ENST00000341060 KRTAP10-1P60331 282 aa8.42□□□□□ -1.06
TDP2-201ENST00000341060 PRR15LQ9BU68 103 aa8.39□□□□□ -1.07
TDP2-201ENST00000341060 HRES1P13985 223 aa8.39□□□□□ -1.07
TDP2-201ENST00000341060 RYR2Q92736 4967 aa8.39□□□□□ -1.07
TDP2-201ENST00000341060 LINC00313P59037 77 aa8.38□□□□□ -1.07
TDP2-201ENST00000341060 PKHD1P08F94 4074 aa8.37□□□□□ -1.07
TDP2-201ENST00000341060 LRP1BQ9NZR2 4599 aa8.36□□□□□ -1.07
TDP2-201ENST00000341060 VPS13BQ7Z7G8 4022 aa8.36□□□□□ -1.07
TDP2-201ENST00000341060 KRTAP1-4P0C5Y4 121 aa8.36□□□□□ -1.07
TDP2-201ENST00000341060 Q75L30 129 aa8.35□□□□□ -1.07
TDP2-201ENST00000341060 CHKB-CPT1BH3BT56 60 aa8.35□□□□□ -1.07
TDP2-201ENST00000341060 FAM229AH3BQW9 127 aa8.33□□□□□ -1.08
TDP2-201ENST00000341060 LINC01558Q9Y6Z2 57 aa8.33□□□□□ -1.08
TDP2-201ENST00000341060 SPAG11AQ6PDA7 123 aa8.32□□□□□ -1.08
TDP2-201ENST00000341060 RYR3Q15413 4870 aa8.3□□□□□ -1.08
TDP2-201ENST00000341060 KRTAP16-1A8MUX0 517 aa8.3□□□□□ -1.08
TDP2-201ENST00000341060 A8MU10 97 aa8.29□□□□□ -1.08
TDP2-201ENST00000341060 ACYP2P14621 99 aa8.27□□□□□ -1.09
TDP2-201ENST00000341060 DMAC1Q96GE9 116 aa8.26□□□□□ -1.09
TDP2-201ENST00000341060 PLA2G1BP04054 148 aaKnown RBP8.25□□□□□ -1.09
TDP2-201ENST00000341060 IGKV2-30P06310 120 aa8.25□□□□□ -1.09
TDP2-201ENST00000341060 A6NED7 52 aa8.24□□□□□ -1.09
TDP2-201ENST00000341060 RETNLBQ9BQ08 111 aa8.24□□□□□ -1.09
TDP2-201ENST00000341060 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
TDP2-201ENST00000341060 PRR26Q8N8Z3 221 aa8.23□□□□□ -1.09
TDP2-201ENST00000341060 TYMSOSQ8TAI1 123 aa8.23□□□□□ -1.09
TDP2-201ENST00000341060 SPINK1P00995 79 aa8.22□□□□□ -1.09
TDP2-201ENST00000341060 LCA10Q71F78 164 aa8.22□□□□□ -1.09
TDP2-201ENST00000341060 A0A1B0GVY2 172 aa8.21□□□□□ -1.1
TDP2-201ENST00000341060 DYNC1H1Q14204 4646 aaKnown RBP8.19□□□□□ -1.1
TDP2-201ENST00000341060 CDC42SE1Q9NRR8 79 aa8.18□□□□□ -1.1
TDP2-201ENST00000341060 PMAIP1Q13794 54 aa8.15□□□□□ -1.1
TDP2-201ENST00000341060 ATP11AUNQ6ZP68 121 aa8.15□□□□□ -1.1
TDP2-201ENST00000341060 RPS29P62273 56 aaKnown RBP8.15□□□□□ -1.11
TDP2-201ENST00000341060 SPINK7P58062 85 aa8.13□□□□□ -1.11
TDP2-201ENST00000341060 IGKV2D-30A0A075B6S6 120 aa8.12□□□□□ -1.11
TDP2-201ENST00000341060 LINC00304Q8N9R0 145 aa8.12□□□□□ -1.11
TDP2-201ENST00000341060 SPTSSBQ8NFR3 76 aa8.12□□□□□ -1.11
TDP2-201ENST00000341060 APOBP04114 4563 aaKnown RBP8.09□□□□□ -1.11
TDP2-201ENST00000341060 SMR3BP02814 79 aaPredicted RBP8.06□□□□□ -1.12
TDP2-201ENST00000341060 FAT1Q14517 4588 aa8.04□□□□□ -1.12
TDP2-201ENST00000341060 C7orf65Q6ZTY9 151 aa8.04□□□□□ -1.12
TDP2-201ENST00000341060 A6NN06 94 aa8.03□□□□□ -1.12
TDP2-201ENST00000341060 A0A1B0GU69 56 aa8.02□□□□□ -1.13
TDP2-201ENST00000341060 EPPK1P58107 5090 aaKnown RBP8□□□□□ -1.13
TDP2-201ENST00000341060 PKHD1L1Q86WI1 4243 aa7.99□□□□□ -1.13
TDP2-201ENST00000341060 KRTAP10-4P60372 401 aaPredicted RBP7.99□□□□□ -1.13
TDP2-201ENST00000341060 KTN1-AS1Q86SY8 53 aa7.99□□□□□ -1.13
TDP2-201ENST00000341060 C20orf166-AS1Q96NR2 134 aa7.94□□□□□ -1.14
TDP2-201ENST00000341060 A8MUU9 505 aa7.94□□□□□ -1.14
TDP2-201ENST00000341060 HSPG2P98160 4391 aa7.94□□□□□ -1.14
TDP2-201ENST00000341060 C9orf92A6NGG3 77 aa7.92□□□□□ -1.14
TDP2-201ENST00000341060 Q8N1X5 172 aa7.92□□□□□ -1.14
TDP2-201ENST00000341060 KIAA1109Q2LD37 5005 aa7.9□□□□□ -1.15
TDP2-201ENST00000341060 SPATA8Q6RVD6 105 aa7.9□□□□□ -1.15
TDP2-201ENST00000341060 UQCR11O14957 56 aa7.89□□□□□ -1.15
TDP2-201ENST00000341060 RYR1P21817 5038 aa7.87□□□□□ -1.15
TDP2-201ENST00000341060 SEC61GP60059 68 aa7.86□□□□□ -1.15
TDP2-201ENST00000341060 MIR22HGQ0VDD5 57 aa7.85□□□□□ -1.15
TDP2-201ENST00000341060 FLG2Q5D862 2391 aaPredicted RBP7.82□□□□□ -1.16
TDP2-201ENST00000341060 KRTAP17-1Q9BYP8 105 aa7.82□□□□□ -1.16
TDP2-201ENST00000341060 Q5VSD8 79 aa7.81□□□□□ -1.16
TDP2-201ENST00000341060 KRTAP3-1Q9BYR8 98 aa7.78□□□□□ -1.16
TDP2-201ENST00000341060 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
TDP2-201ENST00000341060 RBM12B-AS1Q9P1G2 102 aa7.75□□□□□ -1.17
TDP2-201ENST00000341060 TNXBP22105 4242 aa7.72□□□□□ -1.17
TDP2-201ENST00000341060 MYCBP2O75592 4640 aa7.71□□□□□ -1.18
TDP2-201ENST00000341060 KRTAP10-8P60410 259 aa7.67□□□□□ -1.18
TDP2-201ENST00000341060 COX6B2Q6YFQ2 88 aa7.67□□□□□ -1.18
TDP2-201ENST00000341060 FAT3Q8TDW7 4589 aa7.67□□□□□ -1.18
TDP2-201ENST00000341060 KRTAP4-5Q9BYR2 181 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms