RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 NREPQ16612 68 aa7.66□□□□□ -1.18
GTF2F2-201ENST00000340473 C20orf197Q8N268 126 aa7.64□□□□□ -1.19
GTF2F2-201ENST00000340473 RPS29P62273 56 aaKnown RBP7.63□□□□□ -1.19
GTF2F2-201ENST00000340473 Q5XG85 94 aa7.62□□□□□ -1.19
GTF2F2-201ENST00000340473 LIMD2Q9BT23 127 aa7.62□□□□□ -1.19
GTF2F2-201ENST00000340473 KLKP1Q107X0 134 aa7.62□□□□□ -1.19
GTF2F2-201ENST00000340473 DMBT1Q9UGM3 2413 aaPredicted RBP7.61□□□□□ -1.19
GTF2F2-201ENST00000340473 BPY2O14599 106 aa7.6□□□□□ -1.19
GTF2F2-201ENST00000340473 J3QL48 77 aa7.59□□□□□ -1.19
GTF2F2-201ENST00000340473 Q96NJ1 140 aa7.59□□□□□ -1.19
GTF2F2-201ENST00000340473 ASB16-AS1Q495Z4 193 aa7.59□□□□□ -1.19
GTF2F2-201ENST00000340473 LINC00472Q9H8W2 130 aa7.59□□□□□ -1.19
GTF2F2-201ENST00000340473 IGKV4-1P06312 121 aa7.58□□□□□ -1.2
GTF2F2-201ENST00000340473 DEFB116Q30KQ4 102 aa7.58□□□□□ -1.2
GTF2F2-201ENST00000340473 NDUFC1O43677 76 aa7.57□□□□□ -1.2
GTF2F2-201ENST00000340473 C1orf195Q5TG92 126 aa7.57□□□□□ -1.2
GTF2F2-201ENST00000340473 FAM236DA0A1B0GTK5 79 aa7.56□□□□□ -1.2
GTF2F2-201ENST00000340473 H7BZZ5 65 aa7.56□□□□□ -1.2
GTF2F2-201ENST00000340473 FAM236CP0DP71 79 aa7.56□□□□□ -1.2
GTF2F2-201ENST00000340473 Q8N9L7 120 aa7.56□□□□□ -1.2
GTF2F2-201ENST00000340473 RETNLBQ9BQ08 111 aa7.55□□□□□ -1.2
GTF2F2-201ENST00000340473 SNURFQ9Y675 71 aa7.52□□□□□ -1.21
GTF2F2-201ENST00000340473 OCR1Q9BZK8 76 aa7.51□□□□□ -1.21
GTF2F2-201ENST00000340473 TMEM254Q8TBM7 123 aa7.5□□□□□ -1.21
GTF2F2-201ENST00000340473 SERP1Q9Y6X1 66 aa7.5□□□□□ -1.21
GTF2F2-201ENST00000340473 ATP5EP56381 51 aaPredicted RBP7.5□□□□□ -1.21
GTF2F2-201ENST00000340473 DSCR10P59022 87 aa7.5□□□□□ -1.21
GTF2F2-201ENST00000340473 LCE2DQ5TA82 110 aaPredicted RBP7.47□□□□□ -1.21
GTF2F2-201ENST00000340473 A8MWP4 228 aa7.46□□□□□ -1.22
GTF2F2-201ENST00000340473 K7EQZ3 153 aa7.46□□□□□ -1.22
GTF2F2-201ENST00000340473 A0A0U1RQV1 116 aa7.45□□□□□ -1.22
GTF2F2-201ENST00000340473 HERC1Q15751 4861 aa7.44□□□□□ -1.22
GTF2F2-201ENST00000340473 FP248Q71RG6 208 aaPredicted RBP7.43□□□□□ -1.22
GTF2F2-201ENST00000340473 PRR15Q8IV56 129 aa7.43□□□□□ -1.22
GTF2F2-201ENST00000340473 IGHV6-1A0A0B4J1U7 121 aa7.42□□□□□ -1.22
GTF2F2-201ENST00000340473 A0A1B0GVX0 72 aa7.42□□□□□ -1.22
GTF2F2-201ENST00000340473 NDUFB1O75438 58 aa7.42□□□□□ -1.22
GTF2F2-201ENST00000340473 PRR4Q16378 134 aa7.41□□□□□ -1.22
GTF2F2-201ENST00000340473 C5orf47Q569G3 176 aa7.4□□□□□ -1.22
GTF2F2-201ENST00000340473 IGLV7-46A0A075B6I9 117 aa7.4□□□□□ -1.23
GTF2F2-201ENST00000340473 NOTCH2NLQ7Z3S9 236 aa7.4□□□□□ -1.23
GTF2F2-201ENST00000340473 HCG22E2RYF7 251 aa7.39□□□□□ -1.23
GTF2F2-201ENST00000340473 SMIM26A0A096LP01 95 aa7.37□□□□□ -1.23
GTF2F2-201ENST00000340473 C8orf17Q9NRJ1 99 aa7.36□□□□□ -1.23
GTF2F2-201ENST00000340473 C9orf92A6NGG3 77 aa7.36□□□□□ -1.23
GTF2F2-201ENST00000340473 MMP24-AS1A0A0U1RRL7 71 aa7.35□□□□□ -1.23
GTF2F2-201ENST00000340473 C4orf26Q17RF5 130 aa7.35□□□□□ -1.23
GTF2F2-201ENST00000340473 LINC00313P59037 77 aa7.35□□□□□ -1.23
GTF2F2-201ENST00000340473 C8orf87E5RJ46 101 aa7.33□□□□□ -1.24
GTF2F2-201ENST00000340473 KRTAP13-3Q3SY46 172 aa7.33□□□□□ -1.24
GTF2F2-201ENST00000340473 WFDC13Q8IUB5 93 aa7.32□□□□□ -1.24
GTF2F2-201ENST00000340473 ZCCHC13Q8WW36 166 aaKnown RBP7.32□□□□□ -1.24
GTF2F2-201ENST00000340473 HMCN2Q8NDA2 5059 aa7.31□□□□□ -1.24
GTF2F2-201ENST00000340473 KRTAP16-1A8MUX0 517 aa7.31□□□□□ -1.24
GTF2F2-201ENST00000340473 LPAP08519 4548 aa7.3□□□□□ -1.24
GTF2F2-201ENST00000340473 hDV103S1A0JD37 113 aa7.3□□□□□ -1.24
GTF2F2-201ENST00000340473 TPRXLQ17RH7 258 aa7.29□□□□□ -1.24
GTF2F2-201ENST00000340473 CASC2Q6XLA1 102 aa7.29□□□□□ -1.24
GTF2F2-201ENST00000340473 MP68P56378 58 aa7.27□□□□□ -1.25
GTF2F2-201ENST00000340473 MRPL34Q9BQ48 92 aaKnown RBP7.25□□□□□ -1.25
GTF2F2-201ENST00000340473 XP32Q5T750 250 aa7.25□□□□□ -1.25
GTF2F2-201ENST00000340473 H3BPC8 53 aa7.24□□□□□ -1.25
GTF2F2-201ENST00000340473 LRP2P98164 4655 aa7.24□□□□□ -1.25
GTF2F2-201ENST00000340473 Q8N9P0 234 aaPredicted RBP7.23□□□□□ -1.25
GTF2F2-201ENST00000340473 C20orf166-AS1Q96NR2 134 aa7.21□□□□□ -1.25
GTF2F2-201ENST00000340473 CYP4F30PQ9H0H9 118 aa7.21□□□□□ -1.25
GTF2F2-201ENST00000340473 A8MUU9 505 aa7.2□□□□□ -1.26
GTF2F2-201ENST00000340473 TRAV22A0A0B4J277 110 aa7.2□□□□□ -1.26
GTF2F2-201ENST00000340473 NDUFS5O43920 106 aa7.2□□□□□ -1.26
GTF2F2-201ENST00000340473 H0Y9P7 68 aa7.18□□□□□ -1.26
GTF2F2-201ENST00000340473 Q75L30 129 aa7.18□□□□□ -1.26
GTF2F2-201ENST00000340473 C1orf64Q8NEQ6 169 aa7.18□□□□□ -1.26
GTF2F2-201ENST00000340473 LINC00208Q96KT6 92 aa7.18□□□□□ -1.26
GTF2F2-201ENST00000340473 RPL37P61927 97 aaKnown RBP7.16□□□□□ -1.26
GTF2F2-201ENST00000340473 SPANXA2-OT1Q8N9U9 137 aa7.16□□□□□ -1.26
GTF2F2-201ENST00000340473 MPLKIPQ8TAP9 179 aa7.16□□□□□ -1.26
GTF2F2-201ENST00000340473 PRO0628Q9UI54 55 aa7.15□□□□□ -1.27
GTF2F2-201ENST00000340473 TP53AIP1Q9HCN2 124 aa7.13□□□□□ -1.27
GTF2F2-201ENST00000340473 Q1T7F1 81 aa7.12□□□□□ -1.27
GTF2F2-201ENST00000340473 Q5W150 140 aa7.11□□□□□ -1.27
GTF2F2-201ENST00000340473 ATP11AUNQ6ZP68 121 aa7.09□□□□□ -1.27
GTF2F2-201ENST00000340473 PCOTHQ58A44 107 aa7.08□□□□□ -1.28
GTF2F2-201ENST00000340473 V9GYY9 64 aa7.07□□□□□ -1.28
GTF2F2-201ENST00000340473 BRK1Q8WUW1 75 aa7.04□□□□□ -1.28
GTF2F2-201ENST00000340473 SEC61BP60468 96 aaKnown RBP7.04□□□□□ -1.28
GTF2F2-201ENST00000340473 MUC17Q685J3 4493 aa7.03□□□□□ -1.28
GTF2F2-201ENST00000340473 UBR4Q5T4S7 5183 aa7.01□□□□□ -1.29
GTF2F2-201ENST00000340473 IGKV2D-30A0A075B6S6 120 aa6.96□□□□□ -1.29
GTF2F2-201ENST00000340473 IGKV2-30P06310 120 aa6.96□□□□□ -1.29
GTF2F2-201ENST00000340473 PSPHP1O15172 72 aa6.96□□□□□ -1.3
GTF2F2-201ENST00000340473 KRTAP4-1Q9BYQ7 146 aa6.96□□□□□ -1.3
GTF2F2-201ENST00000340473 COA5Q86WW8 74 aa6.95□□□□□ -1.3
GTF2F2-201ENST00000340473 SPINK7P58062 85 aa6.95□□□□□ -1.3
GTF2F2-201ENST00000340473 LOC101927531A0A1B0GV80 90 aa6.94□□□□□ -1.3
GTF2F2-201ENST00000340473 C7orf65Q6ZTY9 151 aa6.93□□□□□ -1.3
GTF2F2-201ENST00000340473 A8MUN3 132 aa6.92□□□□□ -1.3
GTF2F2-201ENST00000340473 MUC2Q02817 5179 aa6.9□□□□□ -1.3
GTF2F2-201ENST00000340473 RNF213Q63HN8 5207 aa6.89□□□□□ -1.31
GTF2F2-201ENST00000340473 Q5VV11 94 aa6.89□□□□□ -1.31
GTF2F2-201ENST00000340473 PRR15LQ9BU68 103 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms