RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 KLKP1Q107X0 134 aa7.3□□□□□ -1.24
LIN54-201ENST00000340417 LAMA5O15230 3695 aa7.3□□□□□ -1.24
LIN54-201ENST00000340417 OCR1Q9BZK8 76 aa7.29□□□□□ -1.24
LIN54-201ENST00000340417 R4GN34 69 aa7.29□□□□□ -1.24
LIN54-201ENST00000340417 MIR22HGQ0VDD5 57 aa7.28□□□□□ -1.24
LIN54-201ENST00000340417 A0A1B0GVY2 172 aa7.27□□□□□ -1.25
LIN54-201ENST00000340417 ASB16-AS1Q495Z4 193 aa7.27□□□□□ -1.25
LIN54-201ENST00000340417 OTOGQ6ZRI0 2925 aa7.27□□□□□ -1.25
LIN54-201ENST00000340417 DMDP11532 3685 aa7.26□□□□□ -1.25
LIN54-201ENST00000340417 RPL37P61927 97 aaKnown RBP7.25□□□□□ -1.25
LIN54-201ENST00000340417 Q75L30 129 aa7.25□□□□□ -1.25
LIN54-201ENST00000340417 ASPMQ8IZT6 3477 aa7.25□□□□□ -1.25
LIN54-201ENST00000340417 TENM1Q9UKZ4 2725 aa7.22□□□□□ -1.25
LIN54-201ENST00000340417 CRIPTQ9P021 101 aa7.21□□□□□ -1.25
LIN54-201ENST00000340417 Q5XG85 94 aa7.21□□□□□ -1.26
LIN54-201ENST00000340417 LCA10Q71F78 164 aa7.2□□□□□ -1.26
LIN54-201ENST00000340417 KRTAP29-1A8MX34 341 aaPredicted RBP7.19□□□□□ -1.26
LIN54-201ENST00000340417 A0A1B0GU33 70 aa7.18□□□□□ -1.26
LIN54-201ENST00000340417 H7BZZ5 65 aa7.18□□□□□ -1.26
LIN54-201ENST00000340417 H1FX-AS1Q4G0G2 97 aa7.17□□□□□ -1.26
LIN54-201ENST00000340417 PLAC4Q8WY50 150 aa7.16□□□□□ -1.26
LIN54-201ENST00000340417 ZFHX3Q15911 3703 aa7.16□□□□□ -1.26
LIN54-201ENST00000340417 TENM3Q9P273 2699 aa7.16□□□□□ -1.26
LIN54-201ENST00000340417 C20orf166-AS1Q96NR2 134 aa7.16□□□□□ -1.26
LIN54-201ENST00000340417 CELSR1Q9NYQ6 3014 aa7.16□□□□□ -1.26
LIN54-201ENST00000340417 NOTCH2NLQ7Z3S9 236 aa7.15□□□□□ -1.26
LIN54-201ENST00000340417 KRTAP1-4P0C5Y4 121 aa7.15□□□□□ -1.27
LIN54-201ENST00000340417 WDFY3Q8IZQ1 3526 aa7.15□□□□□ -1.27
LIN54-201ENST00000340417 M0QZ58 72 aa7.14□□□□□ -1.27
LIN54-201ENST00000340417 RPS28P62857 69 aaKnown RBP7.13□□□□□ -1.27
LIN54-201ENST00000340417 CDC42SE1Q9NRR8 79 aa7.11□□□□□ -1.27
LIN54-201ENST00000340417 ADM2Q7Z4H4 148 aa7.1□□□□□ -1.27
LIN54-201ENST00000340417 PKD1L1Q8TDX9 2849 aa7.09□□□□□ -1.28
LIN54-201ENST00000340417 TPRXLQ17RH7 258 aa7.08□□□□□ -1.28
LIN54-201ENST00000340417 ANK3Q12955 4377 aaKnown RBP7.07□□□□□ -1.28
LIN54-201ENST00000340417 DMAC1Q96GE9 116 aa7.06□□□□□ -1.28
LIN54-201ENST00000340417 XP32Q5T750 250 aa7.05□□□□□ -1.28
LIN54-201ENST00000340417 SMG1Q96Q15 3661 aaKnown RBP7.05□□□□□ -1.28
LIN54-201ENST00000340417 FBN1P35555 2871 aaKnown RBP7.04□□□□□ -1.28
LIN54-201ENST00000340417 A8MUU9 505 aa6.99□□□□□ -1.29
LIN54-201ENST00000340417 PRO0628Q9UI54 55 aa6.98□□□□□ -1.29
LIN54-201ENST00000340417 ZFHX4Q86UP3 3567 aa6.96□□□□□ -1.3
LIN54-201ENST00000340417 KRTAP10-8P60410 259 aa6.96□□□□□ -1.3
LIN54-201ENST00000340417 VWFP04275 2813 aa6.92□□□□□ -1.3
LIN54-201ENST00000340417 CSMD1Q96PZ7 3565 aa6.91□□□□□ -1.3
LIN54-201ENST00000340417 KRTAP13-3Q3SY46 172 aa6.9□□□□□ -1.31
LIN54-201ENST00000340417 LINC01558Q9Y6Z2 57 aa6.87□□□□□ -1.31
LIN54-201ENST00000340417 TGP01266 2768 aa6.86□□□□□ -1.31
LIN54-201ENST00000340417 Q1T7F1 81 aa6.85□□□□□ -1.31
LIN54-201ENST00000340417 CSMD2Q7Z408 3487 aa6.85□□□□□ -1.31
LIN54-201ENST00000340417 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
LIN54-201ENST00000340417 FBN3Q75N90 2809 aa6.79□□□□□ -1.32
LIN54-201ENST00000340417 SPENQ96T58 3664 aaKnown RBP6.79□□□□□ -1.32
LIN54-201ENST00000340417 BSNQ9UPA5 3926 aa6.78□□□□□ -1.32
LIN54-201ENST00000340417 SPATA8Q6RVD6 105 aa6.78□□□□□ -1.32
LIN54-201ENST00000340417 CYSTM1Q9H1C7 97 aa6.69□□□□□ -1.34
LIN54-201ENST00000340417 TRRAPQ9Y4A5 3859 aa6.67□□□□□ -1.34
LIN54-201ENST00000340417 LUZP6Q538Z0 58 aa6.63□□□□□ -1.35
LIN54-201ENST00000340417 KRTAP4-5Q9BYR2 181 aa6.62□□□□□ -1.35
LIN54-201ENST00000340417 KRTAP16-1A8MUX0 517 aa6.61□□□□□ -1.35
LIN54-201ENST00000340417 ROMO1P60602 79 aa6.61□□□□□ -1.35
LIN54-201ENST00000340417 Q5VV11 94 aa6.59□□□□□ -1.35
LIN54-201ENST00000340417 KTN1-AS1Q86SY8 53 aa6.57□□□□□ -1.36
LIN54-201ENST00000340417 HUWE1Q7Z6Z7 4374 aaKnown RBP6.55□□□□□ -1.36
LIN54-201ENST00000340417 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
LIN54-201ENST00000340417 SVEP1Q4LDE5 3571 aa6.53□□□□□ -1.36
LIN54-201ENST00000340417 A8MU10 97 aa6.53□□□□□ -1.36
LIN54-201ENST00000340417 MT1HL1P0DM35 61 aa6.53□□□□□ -1.36
LIN54-201ENST00000340417 ALMS1Q8TCU4 4167 aa6.52□□□□□ -1.37
LIN54-201ENST00000340417 TNP1P09430 55 aa6.51□□□□□ -1.37
LIN54-201ENST00000340417 AKAP9Q99996 3911 aa6.49□□□□□ -1.37
LIN54-201ENST00000340417 SRRM2Q9UQ35 2752 aaKnown RBP6.45□□□□□ -1.38
LIN54-201ENST00000340417 COL7A1Q02388 2944 aa6.44□□□□□ -1.38
LIN54-201ENST00000340417 PRAC1Q96KF2 57 aa6.37□□□□□ -1.39
LIN54-201ENST00000340417 KRTAP10-4P60372 401 aaPredicted RBP6.35□□□□□ -1.39
LIN54-201ENST00000340417 DNAH9Q9NYC9 4486 aa6.34□□□□□ -1.39
LIN54-201ENST00000340417 MEGF8Q7Z7M0 2845 aa6.32□□□□□ -1.4
LIN54-201ENST00000340417 ZNF469Q96JG9 3925 aaPredicted RBP6.3□□□□□ -1.4
LIN54-201ENST00000340417 P0C880 135 aa6.27□□□□□ -1.41
LIN54-201ENST00000340417 CUBNO60494 3623 aa6.25□□□□□ -1.41
LIN54-201ENST00000340417 DNHD1Q96M86 4753 aa6.25□□□□□ -1.41
LIN54-201ENST00000340417 VPS13CQ709C8 3753 aa6.24□□□□□ -1.41
LIN54-201ENST00000340417 A6NN06 94 aa6.14□□□□□ -1.43
LIN54-201ENST00000340417 DNAH1Q9P2D7 4330 aa6.09□□□□□ -1.43
LIN54-201ENST00000340417 PP632Q6XCG6 107 aa6.09□□□□□ -1.43
LIN54-201ENST00000340417 A0A0A0MQY5 61 aa6.09□□□□□ -1.43
LIN54-201ENST00000340417 KRTAP25-1Q3LHN0 102 aa6.08□□□□□ -1.44
LIN54-201ENST00000340417 H0YAA0 97 aa6.07□□□□□ -1.44
LIN54-201ENST00000340417 DNAH5Q8TE73 4624 aa6.04□□□□□ -1.44
LIN54-201ENST00000340417 DNAH11Q96DT5 4516 aa6.03□□□□□ -1.44
LIN54-201ENST00000340417 C10orf95Q9H7T3 257 aa6.02□□□□□ -1.45
LIN54-201ENST00000340417 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
LIN54-201ENST00000340417 PLECQ15149 4684 aaKnown RBP5.98□□□□□ -1.45
LIN54-201ENST00000340417 ANK2Q01484 3957 aa5.98□□□□□ -1.45
LIN54-201ENST00000340417 DNAH10Q8IVF4 4471 aa5.91□□□□□ -1.46
LIN54-201ENST00000340417 PRKDCP78527 4128 aaKnown RBP5.9□□□□□ -1.46
LIN54-201ENST00000340417 VPS13DQ5THJ4 4388 aa5.9□□□□□ -1.46
LIN54-201ENST00000340417 H3BS24 57 aa5.9□□□□□ -1.47
LIN54-201ENST00000340417 KRTAP12-2P59991 146 aa5.87□□□□□ -1.47
LIN54-201ENST00000340417 DYNC1H1Q14204 4646 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms