RNA–Protein interactions for RNA: ENST00000340001.8

ABCA9-201, Transcript of ATP binding cassette subfamily A member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA9, Length 6,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-201ENST00000340001 LINC00472Q9H8W2 130 aa4.29□□□□□ -1.72
ABCA9-201ENST00000340001 Q5VV11 94 aa4.29□□□□□ -1.72
ABCA9-201ENST00000340001 ZNF292O60281 2723 aa4.28□□□□□ -1.72
ABCA9-201ENST00000340001 ROMO1P60602 79 aa4.28□□□□□ -1.72
ABCA9-201ENST00000340001 Q75L30 129 aa4.28□□□□□ -1.72
ABCA9-201ENST00000340001 A0A087X002 238 aa4.27□□□□□ -1.73
ABCA9-201ENST00000340001 KRTAP11-1Q8IUC1 163 aa4.27□□□□□ -1.73
ABCA9-201ENST00000340001 NOTCH2NLQ7Z3S9 236 aa4.25□□□□□ -1.73
ABCA9-201ENST00000340001 SVEP1Q4LDE5 3571 aa4.25□□□□□ -1.73
ABCA9-201ENST00000340001 LINC01558Q9Y6Z2 57 aa4.23□□□□□ -1.73
ABCA9-201ENST00000340001 A8MUU9 505 aa4.23□□□□□ -1.73
ABCA9-201ENST00000340001 KRTAP10-8P60410 259 aa4.23□□□□□ -1.73
ABCA9-201ENST00000340001 IGSF10Q6WRI0 2623 aa4.22□□□□□ -1.73
ABCA9-201ENST00000340001 RPL37P61927 97 aaKnown RBP4.22□□□□□ -1.73
ABCA9-201ENST00000340001 SPENQ96T58 3664 aaKnown RBP4.21□□□□□ -1.74
ABCA9-201ENST00000340001 Q6ZR54 194 aa4.2□□□□□ -1.74
ABCA9-201ENST00000340001 NBPF19A0A087WUL8 3843 aa4.2□□□□□ -1.74
ABCA9-201ENST00000340001 ZFHX3Q15911 3703 aa4.2□□□□□ -1.74
ABCA9-201ENST00000340001 UTP20O75691 2785 aaKnown RBP4.2□□□□□ -1.74
ABCA9-201ENST00000340001 SPRR1BP22528 89 aa4.19□□□□□ -1.74
ABCA9-201ENST00000340001 KRTAP4-16G5E9R7 235 aaPredicted RBP4.19□□□□□ -1.74
ABCA9-201ENST00000340001 C10orf95Q9H7T3 257 aa4.18□□□□□ -1.74
ABCA9-201ENST00000340001 A8MU10 97 aa4.18□□□□□ -1.74
ABCA9-201ENST00000340001 KRTAP7-1Q8IUC3 87 aa4.17□□□□□ -1.74
ABCA9-201ENST00000340001 KRTAP16-1A8MUX0 517 aa4.17□□□□□ -1.74
ABCA9-201ENST00000340001 MUC3AQ02505 3323 aa4.17□□□□□ -1.74
ABCA9-201ENST00000340001 CUBNO60494 3623 aa4.17□□□□□ -1.74
ABCA9-201ENST00000340001 ITPR1Q14643 2758 aa4.16□□□□□ -1.74
ABCA9-201ENST00000340001 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
ABCA9-201ENST00000340001 KRTAP10-10P60014 251 aa4.14□□□□□ -1.75
ABCA9-201ENST00000340001 NSD1Q96L73 2696 aaPredicted RBP4.14□□□□□ -1.75
ABCA9-201ENST00000340001 APCP25054 2843 aa4.14□□□□□ -1.75
ABCA9-201ENST00000340001 ITPR2Q14571 2701 aa4.13□□□□□ -1.75
ABCA9-201ENST00000340001 HIVEP1P15822 2718 aa4.13□□□□□ -1.75
ABCA9-201ENST00000340001 KRTAP29-1A8MX34 341 aaPredicted RBP4.12□□□□□ -1.75
ABCA9-201ENST00000340001 HRNRQ86YZ3 2850 aaPredicted RBP4.1□□□□□ -1.75
ABCA9-201ENST00000340001 UBR5O95071 2799 aaPredicted RBP4.09□□□□□ -1.75
ABCA9-201ENST00000340001 FLNCQ14315 2725 aa4.09□□□□□ -1.75
ABCA9-201ENST00000340001 Q6ZRN7 208 aaPredicted RBP4.07□□□□□ -1.76
ABCA9-201ENST00000340001 CELSR2Q9HCU4 2923 aa4.06□□□□□ -1.76
ABCA9-201ENST00000340001 KRTAP13-2Q52LG2 175 aa4.06□□□□□ -1.76
ABCA9-201ENST00000340001 TNP1P09430 55 aa4.05□□□□□ -1.76
ABCA9-201ENST00000340001 FBN2P35556 2912 aa4.04□□□□□ -1.76
ABCA9-201ENST00000340001 CELSR1Q9NYQ6 3014 aa4.03□□□□□ -1.76
ABCA9-201ENST00000340001 ZANQ9Y493 2812 aa4.01□□□□□ -1.77
ABCA9-201ENST00000340001 CSMD2Q7Z408 3487 aa4.01□□□□□ -1.77
ABCA9-201ENST00000340001 DCHS2Q6V1P9 2916 aa4.01□□□□□ -1.77
ABCA9-201ENST00000340001 BSNQ9UPA5 3926 aa4□□□□□ -1.77
ABCA9-201ENST00000340001 KRTAP13-1Q8IUC0 172 aa3.98□□□□□ -1.77
ABCA9-201ENST00000340001 TENM4Q6N022 2769 aa3.98□□□□□ -1.77
ABCA9-201ENST00000340001 A6NN06 94 aa3.96□□□□□ -1.78
ABCA9-201ENST00000340001 VPS13CQ709C8 3753 aa3.95□□□□□ -1.78
ABCA9-201ENST00000340001 KRTAP25-1Q3LHN0 102 aa3.93□□□□□ -1.78
ABCA9-201ENST00000340001 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
ABCA9-201ENST00000340001 ASB16-AS1Q495Z4 193 aa3.91□□□□□ -1.78
ABCA9-201ENST00000340001 TENM1Q9UKZ4 2725 aa3.88□□□□□ -1.79
ABCA9-201ENST00000340001 PRO2289Q9P1D8 64 aa3.88□□□□□ -1.79
ABCA9-201ENST00000340001 NF1P21359 2839 aa3.88□□□□□ -1.79
ABCA9-201ENST00000340001 XP32Q5T750 250 aa3.88□□□□□ -1.79
ABCA9-201ENST00000340001 PKD1L1Q8TDX9 2849 aa3.85□□□□□ -1.79
ABCA9-201ENST00000340001 KRTAP21-3Q3LHN1 58 aa3.85□□□□□ -1.79
ABCA9-201ENST00000340001 MXRA5Q9NR99 2828 aa3.84□□□□□ -1.79
ABCA9-201ENST00000340001 RPS29P62273 56 aaKnown RBP3.84□□□□□ -1.79
ABCA9-201ENST00000340001 TENM2Q9NT68 2774 aa3.84□□□□□ -1.79
ABCA9-201ENST00000340001 KRTAP1-4P0C5Y4 121 aa3.83□□□□□ -1.8
ABCA9-201ENST00000340001 NIPBLQ6KC79 2804 aaeCLIP3.82□□□□□ -1.8
ABCA9-201ENST00000340001 VWFP04275 2813 aa3.82□□□□□ -1.8
ABCA9-201ENST00000340001 H0YAA0 97 aa3.79□□□□□ -1.8
ABCA9-201ENST00000340001 ANK3Q12955 4377 aaKnown RBP3.78□□□□□ -1.8
ABCA9-201ENST00000340001 TRRAPQ9Y4A5 3859 aa3.77□□□□□ -1.81
ABCA9-201ENST00000340001 TENM3Q9P273 2699 aa3.75□□□□□ -1.81
ABCA9-201ENST00000340001 CSMD3Q7Z407 3707 aa3.74□□□□□ -1.81
ABCA9-201ENST00000340001 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
ABCA9-201ENST00000340001 AKAP9Q99996 3911 aa3.71□□□□□ -1.82
ABCA9-201ENST00000340001 TPRXLQ17RH7 258 aa3.7□□□□□ -1.82
ABCA9-201ENST00000340001 PDZD2O15018 2839 aa3.7□□□□□ -1.82
ABCA9-201ENST00000340001 TGP01266 2768 aa3.68□□□□□ -1.82
ABCA9-201ENST00000340001 ZNF469Q96JG9 3925 aaPredicted RBP3.68□□□□□ -1.82
ABCA9-201ENST00000340001 SRRM2Q9UQ35 2752 aaKnown RBP3.66□□□□□ -1.82
ABCA9-201ENST00000340001 FBN1P35555 2871 aaKnown RBP3.65□□□□□ -1.83
ABCA9-201ENST00000340001 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
ABCA9-201ENST00000340001 KRTAP13-3Q3SY46 172 aa3.64□□□□□ -1.83
ABCA9-201ENST00000340001 KRTAP12-2P59991 146 aa3.63□□□□□ -1.83
ABCA9-201ENST00000340001 HUWE1Q7Z6Z7 4374 aaKnown RBP3.6□□□□□ -1.83
ABCA9-201ENST00000340001 LORP23490 312 aaPredicted RBP3.59□□□□□ -1.83
ABCA9-201ENST00000340001 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
ABCA9-201ENST00000340001 KRTAP10-6P60371 365 aaPredicted RBP3.57□□□□□ -1.84
ABCA9-201ENST00000340001 OTOGQ6ZRI0 2925 aa3.56□□□□□ -1.84
ABCA9-201ENST00000340001 KRTAP3-1Q9BYR8 98 aa3.5□□□□□ -1.85
ABCA9-201ENST00000340001 MEGF8Q7Z7M0 2845 aa3.48□□□□□ -1.85
ABCA9-201ENST00000340001 FBN3Q75N90 2809 aa3.47□□□□□ -1.85
ABCA9-201ENST00000340001 KRTAP13-4Q3LI77 160 aa3.46□□□□□ -1.86
ABCA9-201ENST00000340001 KRTAP4-5Q9BYR2 181 aa3.46□□□□□ -1.86
ABCA9-201ENST00000340001 KRTAP12-1P59990 96 aa3.46□□□□□ -1.86
ABCA9-201ENST00000340001 DNAH10Q8IVF4 4471 aa3.41□□□□□ -1.86
ABCA9-201ENST00000340001 COL7A1Q02388 2944 aa3.4□□□□□ -1.87
ABCA9-201ENST00000340001 FRAS1Q86XX4 4008 aa3.36□□□□□ -1.87
ABCA9-201ENST00000340001 DNAH9Q9NYC9 4486 aa3.33□□□□□ -1.88
ABCA9-201ENST00000340001 KRTAP10-5P60370 271 aa3.32□□□□□ -1.88
ABCA9-201ENST00000340001 LYSTQ99698 3801 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms