RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 TENM1Q9UKZ4 2725 aa9.46□□□□□ -0.9
CCNY-202ENST00000339497 KTN1-AS1Q86SY8 53 aa9.44□□□□□ -0.9
CCNY-202ENST00000339497 LINC01554Q52M75 96 aa9.43□□□□□ -0.9
CCNY-202ENST00000339497 LCE6AA0A183 80 aa9.43□□□□□ -0.9
CCNY-202ENST00000339497 LINC01558Q9Y6Z2 57 aa9.43□□□□□ -0.9
CCNY-202ENST00000339497 Q75L30 129 aa9.42□□□□□ -0.9
CCNY-202ENST00000339497 NOTCH2NLQ7Z3S9 236 aa9.41□□□□□ -0.9
CCNY-202ENST00000339497 SMG1Q96Q15 3661 aaKnown RBP9.41□□□□□ -0.9
CCNY-202ENST00000339497 Q6ZSA8 131 aa9.41□□□□□ -0.9
CCNY-202ENST00000339497 CSMD1Q96PZ7 3565 aa9.41□□□□□ -0.9
CCNY-202ENST00000339497 PKD1L1Q8TDX9 2849 aa9.41□□□□□ -0.9
CCNY-202ENST00000339497 SPINK7P58062 85 aa9.4□□□□□ -0.91
CCNY-202ENST00000339497 FBN1P35555 2871 aaKnown RBP9.39□□□□□ -0.91
CCNY-202ENST00000339497 Q5VV11 94 aa9.38□□□□□ -0.91
CCNY-202ENST00000339497 SPINT4Q6UDR6 99 aa9.38□□□□□ -0.91
CCNY-202ENST00000339497 A0A1B0GU33 70 aa9.36□□□□□ -0.91
CCNY-202ENST00000339497 PDZD2O15018 2839 aa9.34□□□□□ -0.91
CCNY-202ENST00000339497 CRIPTQ9P021 101 aa9.33□□□□□ -0.92
CCNY-202ENST00000339497 VWFP04275 2813 aa9.33□□□□□ -0.92
CCNY-202ENST00000339497 Q5VSD8 79 aa9.33□□□□□ -0.92
CCNY-202ENST00000339497 LCA10Q71F78 164 aa9.3□□□□□ -0.92
CCNY-202ENST00000339497 KRTAP13-1Q8IUC0 172 aa9.29□□□□□ -0.92
CCNY-202ENST00000339497 OTOGQ6ZRI0 2925 aa9.28□□□□□ -0.92
CCNY-202ENST00000339497 SVEP1Q4LDE5 3571 aa9.27□□□□□ -0.93
CCNY-202ENST00000339497 CUBNO60494 3623 aa9.26□□□□□ -0.93
CCNY-202ENST00000339497 DMAC1Q96GE9 116 aa9.25□□□□□ -0.93
CCNY-202ENST00000339497 TENM2Q9NT68 2774 aa9.21□□□□□ -0.93
CCNY-202ENST00000339497 KRTAP13-2Q52LG2 175 aa9.2□□□□□ -0.94
CCNY-202ENST00000339497 TGP01266 2768 aa9.2□□□□□ -0.94
CCNY-202ENST00000339497 CSAG1Q6PB30 78 aa9.17□□□□□ -0.94
CCNY-202ENST00000339497 S4R3F8 94 aa9.16□□□□□ -0.94
CCNY-202ENST00000339497 PRAC1Q96KF2 57 aa9.16□□□□□ -0.94
CCNY-202ENST00000339497 ZFHX3Q15911 3703 aa9.15□□□□□ -0.94
CCNY-202ENST00000339497 NBPF19A0A087WUL8 3843 aa9.15□□□□□ -0.94
CCNY-202ENST00000339497 ASB16-AS1Q495Z4 193 aa9.14□□□□□ -0.95
CCNY-202ENST00000339497 CSMD2Q7Z408 3487 aa9.08□□□□□ -0.96
CCNY-202ENST00000339497 CAMK2N1Q7Z7J9 78 aa9.04□□□□□ -0.96
CCNY-202ENST00000339497 SPENQ96T58 3664 aaKnown RBP9.02□□□□□ -0.97
CCNY-202ENST00000339497 SEC61BP60468 96 aaKnown RBP9.02□□□□□ -0.97
CCNY-202ENST00000339497 M0R2T5 61 aa9.01□□□□□ -0.97
CCNY-202ENST00000339497 R4GN34 69 aa8.98□□□□□ -0.97
CCNY-202ENST00000339497 RPS29P62273 56 aaKnown RBP8.97□□□□□ -0.97
CCNY-202ENST00000339497 SPATA8Q6RVD6 105 aa8.96□□□□□ -0.97
CCNY-202ENST00000339497 H1FX-AS1Q4G0G2 97 aa8.96□□□□□ -0.97
CCNY-202ENST00000339497 RPL37P61927 97 aaKnown RBP8.93□□□□□ -0.98
CCNY-202ENST00000339497 SRRM2Q9UQ35 2752 aaKnown RBP8.93□□□□□ -0.98
CCNY-202ENST00000339497 A8MU10 97 aa8.9□□□□□ -0.98
CCNY-202ENST00000339497 KRTAP21-3Q3LHN1 58 aa8.89□□□□□ -0.99
CCNY-202ENST00000339497 KRTAP1-4P0C5Y4 121 aa8.86□□□□□ -0.99
CCNY-202ENST00000339497 M0QZ58 72 aa8.85□□□□□ -0.99
CCNY-202ENST00000339497 ADM2Q7Z4H4 148 aa8.84□□□□□ -0.99
CCNY-202ENST00000339497 ROMO1P60602 79 aa8.77□□□□□ -1
CCNY-202ENST00000339497 A8MUU9 505 aa8.74□□□□□ -1.01
CCNY-202ENST00000339497 TRRAPQ9Y4A5 3859 aa8.73□□□□□ -1.01
CCNY-202ENST00000339497 BSNQ9UPA5 3926 aa8.73□□□□□ -1.01
CCNY-202ENST00000339497 FBN3Q75N90 2809 aa8.73□□□□□ -1.01
CCNY-202ENST00000339497 C20orf166-AS1Q96NR2 134 aa8.71□□□□□ -1.01
CCNY-202ENST00000339497 A6NN06 94 aa8.71□□□□□ -1.01
CCNY-202ENST00000339497 LUZP6Q538Z0 58 aa8.71□□□□□ -1.02
CCNY-202ENST00000339497 ANK3Q12955 4377 aaKnown RBP8.61□□□□□ -1.03
CCNY-202ENST00000339497 KRTAP16-1A8MUX0 517 aa8.58□□□□□ -1.04
CCNY-202ENST00000339497 XP32Q5T750 250 aa8.54□□□□□ -1.04
CCNY-202ENST00000339497 COL7A1Q02388 2944 aa8.54□□□□□ -1.04
CCNY-202ENST00000339497 MEGF8Q7Z7M0 2845 aa8.51□□□□□ -1.05
CCNY-202ENST00000339497 KRTAP25-1Q3LHN0 102 aa8.46□□□□□ -1.06
CCNY-202ENST00000339497 PLAC4Q8WY50 150 aa8.43□□□□□ -1.06
CCNY-202ENST00000339497 H3BS24 57 aa8.42□□□□□ -1.06
CCNY-202ENST00000339497 KRTAP13-3Q3SY46 172 aa8.39□□□□□ -1.07
CCNY-202ENST00000339497 VPS13CQ709C8 3753 aa8.38□□□□□ -1.07
CCNY-202ENST00000339497 A0A1B0GVY2 172 aa8.35□□□□□ -1.07
CCNY-202ENST00000339497 H0YAA0 97 aa8.34□□□□□ -1.07
CCNY-202ENST00000339497 TPRXLQ17RH7 258 aa8.29□□□□□ -1.08
CCNY-202ENST00000339497 KRTAP10-8P60410 259 aa8.28□□□□□ -1.08
CCNY-202ENST00000339497 P0C880 135 aa8.22□□□□□ -1.09
CCNY-202ENST00000339497 ZNF469Q96JG9 3925 aaPredicted RBP8.2□□□□□ -1.1
CCNY-202ENST00000339497 C10orf95Q9H7T3 257 aa8.18□□□□□ -1.1
CCNY-202ENST00000339497 A0A0A0MQY5 61 aa8.15□□□□□ -1.1
CCNY-202ENST00000339497 TNP1P09430 55 aa8.1□□□□□ -1.11
CCNY-202ENST00000339497 NDUFAF8A1L188 74 aa8.07□□□□□ -1.12
CCNY-202ENST00000339497 CSMD3Q7Z407 3707 aa8.04□□□□□ -1.12
CCNY-202ENST00000339497 KRTAP3-1Q9BYR8 98 aa8.01□□□□□ -1.13
CCNY-202ENST00000339497 HUWE1Q7Z6Z7 4374 aaKnown RBP7.98□□□□□ -1.13
CCNY-202ENST00000339497 KRTAP10-10P60014 251 aa7.9□□□□□ -1.14
CCNY-202ENST00000339497 PP632Q6XCG6 107 aa7.85□□□□□ -1.15
CCNY-202ENST00000339497 KRTAP12-2P59991 146 aa7.83□□□□□ -1.16
CCNY-202ENST00000339497 AKAP9Q99996 3911 aa7.81□□□□□ -1.16
CCNY-202ENST00000339497 MT1HL1P0DM35 61 aa7.75□□□□□ -1.17
CCNY-202ENST00000339497 KRTAP12-1P59990 96 aa7.72□□□□□ -1.17
CCNY-202ENST00000339497 KRTAP10-4P60372 401 aaPredicted RBP7.72□□□□□ -1.17
CCNY-202ENST00000339497 KRTAP10-6P60371 365 aaPredicted RBP7.71□□□□□ -1.18
CCNY-202ENST00000339497 KRTAP13-4Q3LI77 160 aa7.71□□□□□ -1.18
CCNY-202ENST00000339497 DNAH9Q9NYC9 4486 aa7.69□□□□□ -1.18
CCNY-202ENST00000339497 DNHD1Q96M86 4753 aa7.66□□□□□ -1.18
CCNY-202ENST00000339497 PLECQ15149 4684 aaKnown RBP7.6□□□□□ -1.19
CCNY-202ENST00000339497 KRTAP4-5Q9BYR2 181 aa7.58□□□□□ -1.2
CCNY-202ENST00000339497 DNAH5Q8TE73 4624 aa7.57□□□□□ -1.2
CCNY-202ENST00000339497 DNAH11Q96DT5 4516 aa7.54□□□□□ -1.2
CCNY-202ENST00000339497 KRTAP3-3Q9BYR6 98 aa7.53□□□□□ -1.2
CCNY-202ENST00000339497 PRO2289Q9P1D8 64 aa7.53□□□□□ -1.2
CCNY-202ENST00000339497 KRTAP3-2Q9BYR7 98 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms