RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 IGLV7-43P04211 117 aa9.67□□□□□ -0.86
LITAF-201ENST00000339430 C8orf17Q9NRJ1 99 aa9.67□□□□□ -0.86
LITAF-201ENST00000339430 CYP4F30PQ9H0H9 118 aa9.67□□□□□ -0.86
LITAF-201ENST00000339430 A0A1B0GVX0 72 aa9.65□□□□□ -0.87
LITAF-201ENST00000339430 H3BPC8 53 aa9.65□□□□□ -0.87
LITAF-201ENST00000339430 CDK2AP2O75956 126 aa9.65□□□□□ -0.87
LITAF-201ENST00000339430 NDUFS5O43920 106 aa9.64□□□□□ -0.87
LITAF-201ENST00000339430 SPINK6Q6UWN8 80 aa9.63□□□□□ -0.87
LITAF-201ENST00000339430 A0A087X002 238 aa9.63□□□□□ -0.87
LITAF-201ENST00000339430 ASB16-AS1Q495Z4 193 aa9.63□□□□□ -0.87
LITAF-201ENST00000339430 NOTCH2NLQ7Z3S9 236 aa9.63□□□□□ -0.87
LITAF-201ENST00000339430 LRP1BQ9NZR2 4599 aa9.61□□□□□ -0.87
LITAF-201ENST00000339430 DYNC1H1Q14204 4646 aaKnown RBP9.58□□□□□ -0.88
LITAF-201ENST00000339430 PCOTHQ58A44 107 aa9.58□□□□□ -0.88
LITAF-201ENST00000339430 SPANXA2-OT1Q8N9U9 137 aa9.58□□□□□ -0.88
LITAF-201ENST00000339430 TP53AIP1Q9HCN2 124 aa9.57□□□□□ -0.88
LITAF-201ENST00000339430 MRPL34Q9BQ48 92 aaKnown RBP9.57□□□□□ -0.88
LITAF-201ENST00000339430 BRK1Q8WUW1 75 aa9.56□□□□□ -0.88
LITAF-201ENST00000339430 Q1T7F1 81 aa9.53□□□□□ -0.88
LITAF-201ENST00000339430 PRO0628Q9UI54 55 aa9.52□□□□□ -0.89
LITAF-201ENST00000339430 PSPHP1O15172 72 aa9.51□□□□□ -0.89
LITAF-201ENST00000339430 CD164Q04900 197 aa9.51□□□□□ -0.89
LITAF-201ENST00000339430 SMR3BP02814 79 aaPredicted RBP9.51□□□□□ -0.89
LITAF-201ENST00000339430 IGLV7-46A0A075B6I9 117 aa9.48□□□□□ -0.89
LITAF-201ENST00000339430 SSBP3-AS1Q7Z2R9 100 aa9.48□□□□□ -0.89
LITAF-201ENST00000339430 VPS13BQ7Z7G8 4022 aa9.48□□□□□ -0.89
LITAF-201ENST00000339430 APOBP04114 4563 aaKnown RBP9.46□□□□□ -0.9
LITAF-201ENST00000339430 KRTAP13-2Q52LG2 175 aa9.45□□□□□ -0.9
LITAF-201ENST00000339430 COA5Q86WW8 74 aa9.44□□□□□ -0.9
LITAF-201ENST00000339430 Q5W150 140 aa9.43□□□□□ -0.9
LITAF-201ENST00000339430 A8MUN3 132 aa9.42□□□□□ -0.9
LITAF-201ENST00000339430 Q8N9P0 234 aaPredicted RBP9.39□□□□□ -0.91
LITAF-201ENST00000339430 EPPK1P58107 5090 aaKnown RBP9.37□□□□□ -0.91
LITAF-201ENST00000339430 V9GYY9 64 aa9.37□□□□□ -0.91
LITAF-201ENST00000339430 C1orf195Q5TG92 126 aa9.36□□□□□ -0.91
LITAF-201ENST00000339430 LINC00313P59037 77 aa9.36□□□□□ -0.91
LITAF-201ENST00000339430 KRTAP13-3Q3SY46 172 aa9.36□□□□□ -0.91
LITAF-201ENST00000339430 FAT1Q14517 4588 aa9.36□□□□□ -0.91
LITAF-201ENST00000339430 C8orf87E5RJ46 101 aa9.35□□□□□ -0.91
LITAF-201ENST00000339430 RETNLBQ9BQ08 111 aa9.35□□□□□ -0.91
LITAF-201ENST00000339430 KRTAP1-4P0C5Y4 121 aa9.35□□□□□ -0.91
LITAF-201ENST00000339430 LOC101927531A0A1B0GV80 90 aa9.34□□□□□ -0.91
LITAF-201ENST00000339430 KRTAP10-4P60372 401 aaPredicted RBP9.34□□□□□ -0.91
LITAF-201ENST00000339430 Q5VV11 94 aa9.33□□□□□ -0.92
LITAF-201ENST00000339430 PRR15LQ9BU68 103 aa9.32□□□□□ -0.92
LITAF-201ENST00000339430 HRES1P13985 223 aa9.31□□□□□ -0.92
LITAF-201ENST00000339430 LIMD2Q9BT23 127 aa9.31□□□□□ -0.92
LITAF-201ENST00000339430 FAM229AH3BQW9 127 aa9.29□□□□□ -0.92
LITAF-201ENST00000339430 PLA2G1BP04054 148 aaKnown RBP9.28□□□□□ -0.92
LITAF-201ENST00000339430 SPAG11AQ6PDA7 123 aa9.28□□□□□ -0.92
LITAF-201ENST00000339430 HSPG2P98160 4391 aa9.27□□□□□ -0.93
LITAF-201ENST00000339430 KIAA1109Q2LD37 5005 aa9.27□□□□□ -0.93
LITAF-201ENST00000339430 CHKB-CPT1BH3BT56 60 aa9.26□□□□□ -0.93
LITAF-201ENST00000339430 RYR1P21817 5038 aa9.26□□□□□ -0.93
LITAF-201ENST00000339430 Q5VSD8 79 aa9.26□□□□□ -0.93
LITAF-201ENST00000339430 A8MU10 97 aa9.25□□□□□ -0.93
LITAF-201ENST00000339430 TYMSOSQ8TAI1 123 aa9.25□□□□□ -0.93
LITAF-201ENST00000339430 KRTAP17-1Q9BYP8 105 aa9.24□□□□□ -0.93
LITAF-201ENST00000339430 C4orf48Q5BLP8 95 aa9.23□□□□□ -0.93
LITAF-201ENST00000339430 KRTAP16-1A8MUX0 517 aa9.22□□□□□ -0.93
LITAF-201ENST00000339430 PRR26Q8N8Z3 221 aa9.2□□□□□ -0.94
LITAF-201ENST00000339430 Q75L30 129 aa9.17□□□□□ -0.94
LITAF-201ENST00000339430 IGKV2-30P06310 120 aa9.16□□□□□ -0.94
LITAF-201ENST00000339430 LINC01558Q9Y6Z2 57 aa9.16□□□□□ -0.94
LITAF-201ENST00000339430 Q8N1X5 172 aa9.16□□□□□ -0.94
LITAF-201ENST00000339430 A6NED7 52 aa9.15□□□□□ -0.95
LITAF-201ENST00000339430 SPINK1P00995 79 aa9.15□□□□□ -0.95
LITAF-201ENST00000339430 ACYP2P14621 99 aa9.15□□□□□ -0.95
LITAF-201ENST00000339430 IGKV2D-30A0A075B6S6 120 aa9.13□□□□□ -0.95
LITAF-201ENST00000339430 DMAC1Q96GE9 116 aa9.11□□□□□ -0.95
LITAF-201ENST00000339430 LINC00304Q8N9R0 145 aa9.1□□□□□ -0.95
LITAF-201ENST00000339430 LCA10Q71F78 164 aa9.09□□□□□ -0.95
LITAF-201ENST00000339430 PKHD1L1Q86WI1 4243 aa9.05□□□□□ -0.96
LITAF-201ENST00000339430 FLG2Q5D862 2391 aaPredicted RBP9.05□□□□□ -0.96
LITAF-201ENST00000339430 SPINK7P58062 85 aa9.04□□□□□ -0.96
LITAF-201ENST00000339430 SPTSSBQ8NFR3 76 aa9.04□□□□□ -0.96
LITAF-201ENST00000339430 LRP1Q07954 4544 aaKnown RBP9.02□□□□□ -0.97
LITAF-201ENST00000339430 KRTAP4-5Q9BYR2 181 aa9.01□□□□□ -0.97
LITAF-201ENST00000339430 PMAIP1Q13794 54 aa9□□□□□ -0.97
LITAF-201ENST00000339430 CDC42SE1Q9NRR8 79 aa8.99□□□□□ -0.97
LITAF-201ENST00000339430 BIRC6Q9NR09 4857 aa8.98□□□□□ -0.97
LITAF-201ENST00000339430 C7orf65Q6ZTY9 151 aa8.98□□□□□ -0.97
LITAF-201ENST00000339430 C9orf92A6NGG3 77 aa8.97□□□□□ -0.97
LITAF-201ENST00000339430 RPS29P62273 56 aaKnown RBP8.97□□□□□ -0.97
LITAF-201ENST00000339430 KRTAP10-8P60410 259 aa8.95□□□□□ -0.98
LITAF-201ENST00000339430 MYCBP2O75592 4640 aa8.95□□□□□ -0.98
LITAF-201ENST00000339430 ATP11AUNQ6ZP68 121 aa8.93□□□□□ -0.98
LITAF-201ENST00000339430 FAT3Q8TDW7 4589 aa8.9□□□□□ -0.98
LITAF-201ENST00000339430 A0A1B0GU69 56 aa8.9□□□□□ -0.98
LITAF-201ENST00000339430 TNXBP22105 4242 aa8.9□□□□□ -0.99
LITAF-201ENST00000339430 MT1HL1P0DM35 61 aa8.87□□□□□ -0.99
LITAF-201ENST00000339430 HERC2O95714 4834 aa8.86□□□□□ -0.99
LITAF-201ENST00000339430 ABCA13Q86UQ4 5058 aa8.85□□□□□ -0.99
LITAF-201ENST00000339430 DMBT1Q9UGM3 2413 aaPredicted RBP8.85□□□□□ -0.99
LITAF-201ENST00000339430 A8MUU9 505 aa8.82□□□□□ -1
LITAF-201ENST00000339430 A6NN06 94 aa8.81□□□□□ -1
LITAF-201ENST00000339430 C20orf166-AS1Q96NR2 134 aa8.81□□□□□ -1
LITAF-201ENST00000339430 KTN1-AS1Q86SY8 53 aa8.75□□□□□ -1.01
LITAF-201ENST00000339430 UQCR11O14957 56 aa8.7□□□□□ -1.02
LITAF-201ENST00000339430 MIR22HGQ0VDD5 57 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms