RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 KRTAP4-6Q9BYQ5 205 aa1.8□□□□□ -2.12
SOCS4-201ENST00000339298 KRTAP21-3Q3LHN1 58 aa1.8□□□□□ -2.12
SOCS4-201ENST00000339298 FLNCQ14315 2725 aa1.79□□□□□ -2.12
SOCS4-201ENST00000339298 BPTFQ12830 3046 aa1.79□□□□□ -2.12
SOCS4-201ENST00000339298 MAPK1IP1LQ8NDC0 245 aa1.79□□□□□ -2.12
SOCS4-201ENST00000339298 SPEGQ15772 3267 aa1.79□□□□□ -2.12
SOCS4-201ENST00000339298 KRTAP10-8P60410 259 aa1.79□□□□□ -2.12
SOCS4-201ENST00000339298 WDFY4Q6ZS81 3184 aa1.79□□□□□ -2.12
SOCS4-201ENST00000339298 TENM3Q9P273 2699 aa1.79□□□□□ -2.12
SOCS4-201ENST00000339298 SPRR1BP22528 89 aa1.79□□□□□ -2.12
SOCS4-201ENST00000339298 MMP24-AS1A0A0U1RRL7 71 aa1.78□□□□□ -2.12
SOCS4-201ENST00000339298 ANAPC11Q9NYG5 84 aa1.78□□□□□ -2.12
SOCS4-201ENST00000339298 IGSF10Q6WRI0 2623 aa1.78□□□□□ -2.12
SOCS4-201ENST00000339298 CSMD3Q7Z407 3707 aa1.77□□□□□ -2.13
SOCS4-201ENST00000339298 K7EIL1 84 aa1.76□□□□□ -2.13
SOCS4-201ENST00000339298 FAT3Q8TDW7 4589 aa1.76□□□□□ -2.13
SOCS4-201ENST00000339298 BAHCC1Q9P281 2608 aa1.76□□□□□ -2.13
SOCS4-201ENST00000339298 SMG1Q96Q15 3661 aaKnown RBP1.76□□□□□ -2.13
SOCS4-201ENST00000339298 HIVEP1P15822 2718 aa1.76□□□□□ -2.13
SOCS4-201ENST00000339298 INE1O15225 51 aa1.75□□□□□ -2.13
SOCS4-201ENST00000339298 LYSTQ99698 3801 aa1.75□□□□□ -2.13
SOCS4-201ENST00000339298 MT3P25713 68 aa1.75□□□□□ -2.13
SOCS4-201ENST00000339298 TPRXLQ17RH7 258 aa1.75□□□□□ -2.13
SOCS4-201ENST00000339298 GOLGB1Q14789 3259 aaKnown RBP1.74□□□□□ -2.13
SOCS4-201ENST00000339298 M0QZ58 72 aa1.74□□□□□ -2.13
SOCS4-201ENST00000339298 CFAP47Q6ZTR5 3102 aa1.74□□□□□ -2.13
SOCS4-201ENST00000339298 UBR5O95071 2799 aaPredicted RBP1.74□□□□□ -2.13
SOCS4-201ENST00000339298 ITPR1Q14643 2758 aa1.74□□□□□ -2.13
SOCS4-201ENST00000339298 S4R3F8 94 aa1.74□□□□□ -2.13
SOCS4-201ENST00000339298 CMYA5Q8N3K9 4069 aa1.73□□□□□ -2.13
SOCS4-201ENST00000339298 CHD7Q9P2D1 2997 aa1.73□□□□□ -2.13
SOCS4-201ENST00000339298 WDR87Q6ZQQ6 2873 aa1.73□□□□□ -2.13
SOCS4-201ENST00000339298 Q6ZRN7 208 aaPredicted RBP1.73□□□□□ -2.13
SOCS4-201ENST00000339298 C5orf42Q9H799 3197 aa1.72□□□□□ -2.13
SOCS4-201ENST00000339298 DNAH3Q8TD57 4116 aa1.72□□□□□ -2.13
SOCS4-201ENST00000339298 CFAP54Q96N23 3096 aa1.72□□□□□ -2.13
SOCS4-201ENST00000339298 DNAH6Q9C0G6 4158 aa1.72□□□□□ -2.13
SOCS4-201ENST00000339298 DMXL2Q8TDJ6 3036 aa1.72□□□□□ -2.13
SOCS4-201ENST00000339298 RANBP2P49792 3224 aaKnown RBP1.72□□□□□ -2.13
SOCS4-201ENST00000339298 FRYQ5TBA9 3013 aa1.72□□□□□ -2.13
SOCS4-201ENST00000339298 LCE6AA0A183 80 aa1.72□□□□□ -2.13
SOCS4-201ENST00000339298 COL7A1Q02388 2944 aa1.71□□□□□ -2.13
SOCS4-201ENST00000339298 ITPR2Q14571 2701 aa1.71□□□□□ -2.14
SOCS4-201ENST00000339298 EPPK1P58107 5090 aaKnown RBP1.71□□□□□ -2.14
SOCS4-201ENST00000339298 CELSR1Q9NYQ6 3014 aa1.71□□□□□ -2.14
SOCS4-201ENST00000339298 H0YAA0 97 aa1.7□□□□□ -2.14
SOCS4-201ENST00000339298 SPRR1AP35321 89 aa1.7□□□□□ -2.14
SOCS4-201ENST00000339298 ABCA13Q86UQ4 5058 aa1.69□□□□□ -2.14
SOCS4-201ENST00000339298 MGAQ8IWI9 3026 aa1.69□□□□□ -2.14
SOCS4-201ENST00000339298 TENM4Q6N022 2769 aa1.69□□□□□ -2.14
SOCS4-201ENST00000339298 FBN3Q75N90 2809 aa1.69□□□□□ -2.14
SOCS4-201ENST00000339298 TRANK1O15050 2925 aa1.69□□□□□ -2.14
SOCS4-201ENST00000339298 KIAA1109Q2LD37 5005 aa1.68□□□□□ -2.14
SOCS4-201ENST00000339298 PLAC8Q9NZF1 115 aa1.68□□□□□ -2.14
SOCS4-201ENST00000339298 KRTAP12-1P59990 96 aa1.67□□□□□ -2.14
SOCS4-201ENST00000339298 TNP1P09430 55 aa1.67□□□□□ -2.14
SOCS4-201ENST00000339298 UTP20O75691 2785 aaKnown RBP1.67□□□□□ -2.14
SOCS4-201ENST00000339298 PRRC2CQ9Y520 2896 aaKnown RBP1.67□□□□□ -2.14
SOCS4-201ENST00000339298 ZZEF1O43149 2961 aa1.67□□□□□ -2.14
SOCS4-201ENST00000339298 BOD1L1Q8NFC6 3051 aa1.67□□□□□ -2.14
SOCS4-201ENST00000339298 CELSR3Q9NYQ7 3312 aa1.67□□□□□ -2.14
SOCS4-201ENST00000339298 AKAP13Q12802 2813 aa1.67□□□□□ -2.14
SOCS4-201ENST00000339298 KRTAP10-7P60409 375 aaPredicted RBP1.66□□□□□ -2.14
SOCS4-201ENST00000339298 KRTAP13-4Q3LI77 160 aa1.66□□□□□ -2.14
SOCS4-201ENST00000339298 RPS29P62273 56 aaKnown RBP1.66□□□□□ -2.14
SOCS4-201ENST00000339298 FAT4Q6V0I7 4981 aa1.65□□□□□ -2.15
SOCS4-201ENST00000339298 LOC400499M0QZD8 3231 aa1.65□□□□□ -2.15
SOCS4-201ENST00000339298 KRTAP10-2P60368 255 aa1.65□□□□□ -2.15
SOCS4-201ENST00000339298 TRRAPQ9Y4A5 3859 aa1.64□□□□□ -2.15
SOCS4-201ENST00000339298 HUWE1Q7Z6Z7 4374 aaKnown RBP1.64□□□□□ -2.15
SOCS4-201ENST00000339298 FRYLO94915 3013 aa1.64□□□□□ -2.15
SOCS4-201ENST00000339298 KRTAP12-2P59991 146 aa1.64□□□□□ -2.15
SOCS4-201ENST00000339298 VPS13AQ96RL7 3174 aa1.63□□□□□ -2.15
SOCS4-201ENST00000339298 COL27A1Q8IZC6 1860 aaPredicted RBP1.63□□□□□ -2.15
SOCS4-201ENST00000339298 BIRC6Q9NR09 4857 aa1.63□□□□□ -2.15
SOCS4-201ENST00000339298 TEX15Q9BXT5 2789 aa1.62□□□□□ -2.15
SOCS4-201ENST00000339298 LCE3BQ5TA77 95 aa1.61□□□□□ -2.15
SOCS4-201ENST00000339298 DNAH7Q8WXX0 4024 aa1.61□□□□□ -2.15
SOCS4-201ENST00000339298 DNAH1Q9P2D7 4330 aa1.61□□□□□ -2.15
SOCS4-201ENST00000339298 SSPOA2VEC9 5147 aa1.6□□□□□ -2.15
SOCS4-201ENST00000339298 CHD9Q3L8U1 2897 aa1.6□□□□□ -2.15
SOCS4-201ENST00000339298 KRTAP1-1Q07627 177 aa1.59□□□□□ -2.15
SOCS4-201ENST00000339298 KRTAP13-2Q52LG2 175 aa1.59□□□□□ -2.15
SOCS4-201ENST00000339298 ADGRG4Q8IZF6 3080 aa1.59□□□□□ -2.15
SOCS4-201ENST00000339298 VPS13BQ7Z7G8 4022 aa1.58□□□□□ -2.16
SOCS4-201ENST00000339298 KRTAP1-3Q8IUG1 177 aa1.58□□□□□ -2.16
SOCS4-201ENST00000339298 VPS13CQ709C8 3753 aa1.58□□□□□ -2.16
SOCS4-201ENST00000339298 ALMS1Q8TCU4 4167 aa1.57□□□□□ -2.16
SOCS4-201ENST00000339298 MXRA5Q9NR99 2828 aa1.57□□□□□ -2.16
SOCS4-201ENST00000339298 APCP25054 2843 aa1.57□□□□□ -2.16
SOCS4-201ENST00000339298 DYNC2H1Q8NCM8 4307 aaKnown RBP1.57□□□□□ -2.16
SOCS4-201ENST00000339298 HECTD4Q9Y4D8 3996 aa1.57□□□□□ -2.16
SOCS4-201ENST00000339298 CELSR2Q9HCU4 2923 aa1.56□□□□□ -2.16
SOCS4-201ENST00000339298 M0R2T5 61 aa1.55□□□□□ -2.16
SOCS4-201ENST00000339298 FREM2Q5SZK8 3169 aa1.55□□□□□ -2.16
SOCS4-201ENST00000339298 DSPP15924 2871 aaKnown RBP1.54□□□□□ -2.16
SOCS4-201ENST00000339298 ATMQ13315 3056 aa1.54□□□□□ -2.16
SOCS4-201ENST00000339298 TENM1Q9UKZ4 2725 aa1.54□□□□□ -2.16
SOCS4-201ENST00000339298 DNAH12Q6ZR08 3092 aa1.54□□□□□ -2.16
SOCS4-201ENST00000339298 DMXL1Q9Y485 3027 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms