RNA–Protein interactions for RNA: ENST00000338932.7

SPTBN4-201, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SPTBN4, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-201ENST00000338932 FREM2Q5SZK8 3169 aa11.26□□□□□ -0.61
SPTBN4-201ENST00000338932 USP34Q70CQ2 3546 aa11.24□□□□□ -0.61
SPTBN4-201ENST00000338932 PDZD2O15018 2839 aa11.23□□□□□ -0.61
SPTBN4-201ENST00000338932 DMXL2Q8TDJ6 3036 aa11.22□□□□□ -0.61
SPTBN4-201ENST00000338932 Q6ZRN7 208 aaPredicted RBP11.22□□□□□ -0.61
SPTBN4-201ENST00000338932 TNRC18O15417 2968 aaPredicted RBP11.21□□□□□ -0.62
SPTBN4-201ENST00000338932 KRTAP10-2P60368 255 aa11.2□□□□□ -0.62
SPTBN4-201ENST00000338932 KRTAP13-1Q8IUC0 172 aa11.2□□□□□ -0.62
SPTBN4-201ENST00000338932 CRYBG3Q68DQ2 2970 aa11.19□□□□□ -0.62
SPTBN4-201ENST00000338932 A8MU10 97 aa11.17□□□□□ -0.62
SPTBN4-201ENST00000338932 C10orf95Q9H7T3 257 aa11.15□□□□□ -0.63
SPTBN4-201ENST00000338932 CELSR3Q9NYQ7 3312 aa11.14□□□□□ -0.63
SPTBN4-201ENST00000338932 LAMA1P25391 3075 aa11.12□□□□□ -0.63
SPTBN4-201ENST00000338932 UNC80Q8N2C7 3258 aa11.09□□□□□ -0.63
SPTBN4-201ENST00000338932 DCHS2Q6V1P9 2916 aa11.07□□□□□ -0.64
SPTBN4-201ENST00000338932 ZANQ9Y493 2812 aa11.03□□□□□ -0.64
SPTBN4-201ENST00000338932 BOD1L1Q8NFC6 3051 aa11.02□□□□□ -0.65
SPTBN4-201ENST00000338932 DMXL1Q9Y485 3027 aa10.99□□□□□ -0.65
SPTBN4-201ENST00000338932 P0C880 135 aa10.96□□□□□ -0.65
SPTBN4-201ENST00000338932 ADGRG4Q8IZF6 3080 aa10.94□□□□□ -0.66
SPTBN4-201ENST00000338932 LAMA3Q16787 3333 aa10.94□□□□□ -0.66
SPTBN4-201ENST00000338932 HTTP42858 3142 aa10.93□□□□□ -0.66
SPTBN4-201ENST00000338932 COL6A3P12111 3177 aa10.91□□□□□ -0.66
SPTBN4-201ENST00000338932 KRTAP13-2Q52LG2 175 aa10.91□□□□□ -0.66
SPTBN4-201ENST00000338932 DNAH14Q0VDD8 3507 aa10.91□□□□□ -0.66
SPTBN4-201ENST00000338932 FBN2P35556 2912 aa10.88□□□□□ -0.67
SPTBN4-201ENST00000338932 CELSR1Q9NYQ6 3014 aa10.88□□□□□ -0.67
SPTBN4-201ENST00000338932 PRO2289Q9P1D8 64 aa10.85□□□□□ -0.67
SPTBN4-201ENST00000338932 H0YAA0 97 aa10.82□□□□□ -0.68
SPTBN4-201ENST00000338932 HRNRQ86YZ3 2850 aaPredicted RBP10.8□□□□□ -0.68
SPTBN4-201ENST00000338932 KRTAP7-1Q8IUC3 87 aa10.79□□□□□ -0.68
SPTBN4-201ENST00000338932 SRRM2Q9UQ35 2752 aaKnown RBP10.79□□□□□ -0.68
SPTBN4-201ENST00000338932 ATMQ13315 3056 aa10.76□□□□□ -0.69
SPTBN4-201ENST00000338932 MXRA5Q9NR99 2828 aa10.74□□□□□ -0.69
SPTBN4-201ENST00000338932 TENM4Q6N022 2769 aa10.68□□□□□ -0.7
SPTBN4-201ENST00000338932 BRCA2P51587 3418 aa10.65□□□□□ -0.7
SPTBN4-201ENST00000338932 TPRXLQ17RH7 258 aa10.62□□□□□ -0.71
SPTBN4-201ENST00000338932 VCANP13611 3396 aa10.61□□□□□ -0.71
SPTBN4-201ENST00000338932 CDH23Q9H251 3354 aa10.6□□□□□ -0.71
SPTBN4-201ENST00000338932 KRTAP10-8P60410 259 aa10.57□□□□□ -0.72
SPTBN4-201ENST00000338932 KRTAP21-3Q3LHN1 58 aa10.55□□□□□ -0.72
SPTBN4-201ENST00000338932 VWFP04275 2813 aa10.52□□□□□ -0.73
SPTBN4-201ENST00000338932 XP32Q5T750 250 aa10.51□□□□□ -0.73
SPTBN4-201ENST00000338932 TENM2Q9NT68 2774 aa10.49□□□□□ -0.73
SPTBN4-201ENST00000338932 CFAP47Q6ZTR5 3102 aa10.46□□□□□ -0.73
SPTBN4-201ENST00000338932 PKD1L1Q8TDX9 2849 aa10.44□□□□□ -0.74
SPTBN4-201ENST00000338932 COL7A1Q02388 2944 aa10.35□□□□□ -0.75
SPTBN4-201ENST00000338932 SPEGQ15772 3267 aa10.35□□□□□ -0.75
SPTBN4-201ENST00000338932 KRTAP1-4P0C5Y4 121 aa10.35□□□□□ -0.75
SPTBN4-201ENST00000338932 KRTAP13-4Q3LI77 160 aa10.25□□□□□ -0.77
SPTBN4-201ENST00000338932 SPTBN5Q9NRC6 3674 aaKnown RBP10.23□□□□□ -0.77
SPTBN4-201ENST00000338932 INE1O15225 51 aa10.16□□□□□ -0.78
SPTBN4-201ENST00000338932 KRTAP13-3Q3SY46 172 aa10.15□□□□□ -0.78
SPTBN4-201ENST00000338932 EYSQ5T1H1 3165 aa10.13□□□□□ -0.79
SPTBN4-201ENST00000338932 MEGF8Q7Z7M0 2845 aa10.12□□□□□ -0.79
SPTBN4-201ENST00000338932 NBPF19A0A087WUL8 3843 aa10.12□□□□□ -0.79
SPTBN4-201ENST00000338932 KRTAP10-10P60014 251 aa10.08□□□□□ -0.8
SPTBN4-201ENST00000338932 ZFHX3Q15911 3703 aa10.07□□□□□ -0.8
SPTBN4-201ENST00000338932 WDFY3Q8IZQ1 3526 aa10.03□□□□□ -0.8
SPTBN4-201ENST00000338932 SZT2Q5T011 3432 aa10.02□□□□□ -0.8
SPTBN4-201ENST00000338932 KRTAP12-2P59991 146 aa9.95□□□□□ -0.82
SPTBN4-201ENST00000338932 MYO15AQ9UKN7 3530 aa9.94□□□□□ -0.82
SPTBN4-201ENST00000338932 LOC400499M0QZD8 3231 aa9.91□□□□□ -0.82
SPTBN4-201ENST00000338932 ZFHX4Q86UP3 3567 aa9.89□□□□□ -0.83
SPTBN4-201ENST00000338932 KRTAP12-1P59990 96 aa9.86□□□□□ -0.83
SPTBN4-201ENST00000338932 FBN3Q75N90 2809 aa9.82□□□□□ -0.84
SPTBN4-201ENST00000338932 LAMA5O15230 3695 aa9.79□□□□□ -0.84
SPTBN4-201ENST00000338932 A0A1B0GVY2 172 aa9.79□□□□□ -0.84
SPTBN4-201ENST00000338932 SPENQ96T58 3664 aaKnown RBP9.74□□□□□ -0.85
SPTBN4-201ENST00000338932 FBN1P35555 2871 aaKnown RBP9.69□□□□□ -0.86
SPTBN4-201ENST00000338932 ASPMQ8IZT6 3477 aa9.69□□□□□ -0.86
SPTBN4-201ENST00000338932 KRTAP15-1Q3LI76 137 aa9.62□□□□□ -0.87
SPTBN4-201ENST00000338932 SMG1Q96Q15 3661 aaKnown RBP9.6□□□□□ -0.87
SPTBN4-201ENST00000338932 KRTAP23-1A1A580 65 aa9.6□□□□□ -0.87
SPTBN4-201ENST00000338932 RELNP78509 3460 aa9.59□□□□□ -0.87
SPTBN4-201ENST00000338932 AKAP9Q99996 3911 aa9.54□□□□□ -0.88
SPTBN4-201ENST00000338932 DMDP11532 3685 aa9.5□□□□□ -0.89
SPTBN4-201ENST00000338932 OTOGQ6ZRI0 2925 aa9.46□□□□□ -0.9
SPTBN4-201ENST00000338932 VPS13CQ709C8 3753 aa9.42□□□□□ -0.9
SPTBN4-201ENST00000338932 CSMD1Q96PZ7 3565 aa9.41□□□□□ -0.9
SPTBN4-201ENST00000338932 TRRAPQ9Y4A5 3859 aa9.38□□□□□ -0.91
SPTBN4-201ENST00000338932 DCHS1Q96JQ0 3298 aa9.37□□□□□ -0.91
SPTBN4-201ENST00000338932 KRTAP10-6P60371 365 aaPredicted RBP9.33□□□□□ -0.92
SPTBN4-201ENST00000338932 KRTAP3-1Q9BYR8 98 aa9.28□□□□□ -0.92
SPTBN4-201ENST00000338932 KRTAP10-12P60413 245 aa9.15□□□□□ -0.94
SPTBN4-201ENST00000338932 ALMS1Q8TCU4 4167 aa9.06□□□□□ -0.96
SPTBN4-201ENST00000338932 MUC3AQ02505 3323 aa8.92□□□□□ -0.98
SPTBN4-201ENST00000338932 SVEP1Q4LDE5 3571 aa8.92□□□□□ -0.98
SPTBN4-201ENST00000338932 BSNQ9UPA5 3926 aa8.87□□□□□ -0.99
SPTBN4-201ENST00000338932 KRTAP12-3P60328 96 aa8.87□□□□□ -0.99
SPTBN4-201ENST00000338932 KRTAP3-2Q9BYR7 98 aa8.86□□□□□ -0.99
SPTBN4-201ENST00000338932 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
SPTBN4-201ENST00000338932 CUBNO60494 3623 aa8.78□□□□□ -1
SPTBN4-201ENST00000338932 CMYA5Q8N3K9 4069 aa8.77□□□□□ -1
SPTBN4-201ENST00000338932 CSMD3Q7Z407 3707 aa8.76□□□□□ -1.01
SPTBN4-201ENST00000338932 CSMD2Q7Z408 3487 aa8.57□□□□□ -1.04
SPTBN4-201ENST00000338932 LYSTQ99698 3801 aa8.55□□□□□ -1.04
SPTBN4-201ENST00000338932 DNAH3Q8TD57 4116 aa8.55□□□□□ -1.04
SPTBN4-201ENST00000338932 DNAH7Q8WXX0 4024 aa8.53□□□□□ -1.04
SPTBN4-201ENST00000338932 KRTAP19-4Q3LI73 84 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms