RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 M0R2T5 61 aa8.34□□□□□ -1.07
PARVB-201ENST00000338758 FBN1P35555 2871 aaKnown RBP8.33□□□□□ -1.08
PARVB-201ENST00000338758 PDZD2O15018 2839 aa8.3□□□□□ -1.08
PARVB-201ENST00000338758 OTOGQ6ZRI0 2925 aa8.3□□□□□ -1.08
PARVB-201ENST00000338758 SEC61BP60468 96 aaKnown RBP8.3□□□□□ -1.08
PARVB-201ENST00000338758 SPINT4Q6UDR6 99 aa8.29□□□□□ -1.08
PARVB-201ENST00000338758 DMDP11532 3685 aa8.28□□□□□ -1.08
PARVB-201ENST00000338758 VWFP04275 2813 aa8.25□□□□□ -1.09
PARVB-201ENST00000338758 CYSTM1Q9H1C7 97 aa8.24□□□□□ -1.09
PARVB-201ENST00000338758 CSAG1Q6PB30 78 aa8.24□□□□□ -1.09
PARVB-201ENST00000338758 FP248Q71RG6 208 aaPredicted RBP8.24□□□□□ -1.09
PARVB-201ENST00000338758 ZFHX4Q86UP3 3567 aa8.21□□□□□ -1.09
PARVB-201ENST00000338758 TGP01266 2768 aa8.2□□□□□ -1.1
PARVB-201ENST00000338758 NOTCH2NLQ7Z3S9 236 aa8.2□□□□□ -1.1
PARVB-201ENST00000338758 KRTAP13-1Q8IUC0 172 aa8.2□□□□□ -1.1
PARVB-201ENST00000338758 KRTAP13-2Q52LG2 175 aa8.19□□□□□ -1.1
PARVB-201ENST00000338758 A0A1B0GU33 70 aa8.18□□□□□ -1.1
PARVB-201ENST00000338758 ZFHX3Q15911 3703 aa8.18□□□□□ -1.1
PARVB-201ENST00000338758 KRTAP29-1A8MX34 341 aaPredicted RBP8.17□□□□□ -1.1
PARVB-201ENST00000338758 CRIPTQ9P021 101 aa8.17□□□□□ -1.1
PARVB-201ENST00000338758 S4R3F8 94 aa8.17□□□□□ -1.1
PARVB-201ENST00000338758 OXTP01178 125 aa8.14□□□□□ -1.11
PARVB-201ENST00000338758 Q1T7F1 81 aa8.13□□□□□ -1.11
PARVB-201ENST00000338758 ASB16-AS1Q495Z4 193 aa8.1□□□□□ -1.11
PARVB-201ENST00000338758 CAMK2N1Q7Z7J9 78 aa8.1□□□□□ -1.11
PARVB-201ENST00000338758 SMG1Q96Q15 3661 aaKnown RBP8.1□□□□□ -1.11
PARVB-201ENST00000338758 CDC42SE1Q9NRR8 79 aa8.1□□□□□ -1.11
PARVB-201ENST00000338758 NBPF19A0A087WUL8 3843 aa8.09□□□□□ -1.11
PARVB-201ENST00000338758 RPS29P62273 56 aaKnown RBP8.08□□□□□ -1.12
PARVB-201ENST00000338758 LINC01558Q9Y6Z2 57 aa8.07□□□□□ -1.12
PARVB-201ENST00000338758 SRRM2Q9UQ35 2752 aaKnown RBP8.05□□□□□ -1.12
PARVB-201ENST00000338758 DMAC1Q96GE9 116 aa8.04□□□□□ -1.12
PARVB-201ENST00000338758 R4GN34 69 aa8.03□□□□□ -1.12
PARVB-201ENST00000338758 Q5XG85 94 aa8.01□□□□□ -1.13
PARVB-201ENST00000338758 Q75L30 129 aa8.01□□□□□ -1.13
PARVB-201ENST00000338758 CSMD2Q7Z408 3487 aa7.92□□□□□ -1.14
PARVB-201ENST00000338758 Q5VV11 94 aa7.92□□□□□ -1.14
PARVB-201ENST00000338758 KTN1-AS1Q86SY8 53 aa7.91□□□□□ -1.14
PARVB-201ENST00000338758 KRTAP1-4P0C5Y4 121 aa7.9□□□□□ -1.14
PARVB-201ENST00000338758 M0QZ58 72 aa7.88□□□□□ -1.15
PARVB-201ENST00000338758 CSMD1Q96PZ7 3565 aa7.87□□□□□ -1.15
PARVB-201ENST00000338758 RPL37P61927 97 aaKnown RBP7.87□□□□□ -1.15
PARVB-201ENST00000338758 H1FX-AS1Q4G0G2 97 aa7.84□□□□□ -1.15
PARVB-201ENST00000338758 ADM2Q7Z4H4 148 aa7.84□□□□□ -1.15
PARVB-201ENST00000338758 LCA10Q71F78 164 aa7.83□□□□□ -1.16
PARVB-201ENST00000338758 CUBNO60494 3623 aa7.81□□□□□ -1.16
PARVB-201ENST00000338758 SVEP1Q4LDE5 3571 aa7.8□□□□□ -1.16
PARVB-201ENST00000338758 SPATA8Q6RVD6 105 aa7.77□□□□□ -1.17
PARVB-201ENST00000338758 A8MUU9 505 aa7.77□□□□□ -1.17
PARVB-201ENST00000338758 C20orf166-AS1Q96NR2 134 aa7.74□□□□□ -1.17
PARVB-201ENST00000338758 SPENQ96T58 3664 aaKnown RBP7.71□□□□□ -1.17
PARVB-201ENST00000338758 PRAC1Q96KF2 57 aa7.69□□□□□ -1.18
PARVB-201ENST00000338758 FBN3Q75N90 2809 aa7.68□□□□□ -1.18
PARVB-201ENST00000338758 XP32Q5T750 250 aa7.68□□□□□ -1.18
PARVB-201ENST00000338758 A0A1B0GVY2 172 aa7.65□□□□□ -1.18
PARVB-201ENST00000338758 PLAC4Q8WY50 150 aa7.65□□□□□ -1.18
PARVB-201ENST00000338758 TRRAPQ9Y4A5 3859 aa7.63□□□□□ -1.19
PARVB-201ENST00000338758 LUZP6Q538Z0 58 aa7.59□□□□□ -1.19
PARVB-201ENST00000338758 ROMO1P60602 79 aa7.59□□□□□ -1.19
PARVB-201ENST00000338758 ANK3Q12955 4377 aaKnown RBP7.57□□□□□ -1.2
PARVB-201ENST00000338758 COL7A1Q02388 2944 aa7.57□□□□□ -1.2
PARVB-201ENST00000338758 A8MU10 97 aa7.57□□□□□ -1.2
PARVB-201ENST00000338758 TPRXLQ17RH7 258 aa7.56□□□□□ -1.2
PARVB-201ENST00000338758 KRTAP10-8P60410 259 aa7.51□□□□□ -1.21
PARVB-201ENST00000338758 MEGF8Q7Z7M0 2845 aa7.51□□□□□ -1.21
PARVB-201ENST00000338758 KRTAP16-1A8MUX0 517 aa7.5□□□□□ -1.21
PARVB-201ENST00000338758 KRTAP13-3Q3SY46 172 aa7.49□□□□□ -1.21
PARVB-201ENST00000338758 BSNQ9UPA5 3926 aa7.47□□□□□ -1.21
PARVB-201ENST00000338758 A6NN06 94 aa7.25□□□□□ -1.25
PARVB-201ENST00000338758 KRTAP10-10P60014 251 aa7.23□□□□□ -1.25
PARVB-201ENST00000338758 TNP1P09430 55 aa7.21□□□□□ -1.26
PARVB-201ENST00000338758 P0C880 135 aa7.18□□□□□ -1.26
PARVB-201ENST00000338758 KRTAP25-1Q3LHN0 102 aa7.16□□□□□ -1.26
PARVB-201ENST00000338758 H0YAA0 97 aa7.12□□□□□ -1.27
PARVB-201ENST00000338758 VPS13CQ709C8 3753 aa7.11□□□□□ -1.27
PARVB-201ENST00000338758 ZNF469Q96JG9 3925 aaPredicted RBP7.07□□□□□ -1.28
PARVB-201ENST00000338758 MT1HL1P0DM35 61 aa7.04□□□□□ -1.28
PARVB-201ENST00000338758 HUWE1Q7Z6Z7 4374 aaKnown RBP7□□□□□ -1.29
PARVB-201ENST00000338758 A0A0A0MQY5 61 aa6.99□□□□□ -1.29
PARVB-201ENST00000338758 C10orf95Q9H7T3 257 aa6.98□□□□□ -1.29
PARVB-201ENST00000338758 KRTAP4-5Q9BYR2 181 aa6.98□□□□□ -1.29
PARVB-201ENST00000338758 DNHD1Q96M86 4753 aa6.96□□□□□ -1.3
PARVB-201ENST00000338758 KRTAP3-1Q9BYR8 98 aa6.94□□□□□ -1.3
PARVB-201ENST00000338758 KRTAP10-4P60372 401 aaPredicted RBP6.94□□□□□ -1.3
PARVB-201ENST00000338758 PRO2289Q9P1D8 64 aa6.9□□□□□ -1.3
PARVB-201ENST00000338758 PP632Q6XCG6 107 aa6.89□□□□□ -1.31
PARVB-201ENST00000338758 AKAP9Q99996 3911 aa6.84□□□□□ -1.31
PARVB-201ENST00000338758 CSMD3Q7Z407 3707 aa6.83□□□□□ -1.32
PARVB-201ENST00000338758 H3BS24 57 aa6.83□□□□□ -1.32
PARVB-201ENST00000338758 DNAH9Q9NYC9 4486 aa6.79□□□□□ -1.32
PARVB-201ENST00000338758 NDUFAF8A1L188 74 aa6.76□□□□□ -1.33
PARVB-201ENST00000338758 KRTAP12-2P59991 146 aa6.75□□□□□ -1.33
PARVB-201ENST00000338758 DNAH5Q8TE73 4624 aa6.71□□□□□ -1.34
PARVB-201ENST00000338758 KRTAP12-1P59990 96 aa6.69□□□□□ -1.34
PARVB-201ENST00000338758 KRTAP10-6P60371 365 aaPredicted RBP6.65□□□□□ -1.34
PARVB-201ENST00000338758 PLECQ15149 4684 aaKnown RBP6.62□□□□□ -1.35
PARVB-201ENST00000338758 KRTAP13-4Q3LI77 160 aa6.61□□□□□ -1.35
PARVB-201ENST00000338758 DNAH11Q96DT5 4516 aa6.58□□□□□ -1.36
PARVB-201ENST00000338758 ALMS1Q8TCU4 4167 aa6.54□□□□□ -1.36
PARVB-201ENST00000338758 KRTAP3-3Q9BYR6 98 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms