RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 hDV103S1A0JD37 113 aa9.37□□□□□ -0.91
HPS1-202ENST00000338546 C5orf47Q569G3 176 aa9.37□□□□□ -0.91
HPS1-202ENST00000338546 TMEM254Q8TBM7 123 aa9.37□□□□□ -0.91
HPS1-202ENST00000338546 FAT1Q14517 4588 aa9.36□□□□□ -0.91
HPS1-202ENST00000338546 IGHV6-1A0A0B4J1U7 121 aa9.35□□□□□ -0.91
HPS1-202ENST00000338546 NDUFC1O43677 76 aa9.35□□□□□ -0.91
HPS1-202ENST00000338546 C1orf195Q5TG92 126 aa9.35□□□□□ -0.91
HPS1-202ENST00000338546 PRR26Q8N8Z3 221 aa9.35□□□□□ -0.91
HPS1-202ENST00000338546 C8orf87E5RJ46 101 aa9.34□□□□□ -0.91
HPS1-202ENST00000338546 LINC00304Q8N9R0 145 aa9.34□□□□□ -0.91
HPS1-202ENST00000338546 A0A0U1RQV1 116 aa9.32□□□□□ -0.92
HPS1-202ENST00000338546 TMEM258P61165 79 aa9.32□□□□□ -0.92
HPS1-202ENST00000338546 TP53AIP1Q9HCN2 124 aa9.32□□□□□ -0.92
HPS1-202ENST00000338546 PKHD1L1Q86WI1 4243 aa9.32□□□□□ -0.92
HPS1-202ENST00000338546 CYSTM1Q9H1C7 97 aa9.31□□□□□ -0.92
HPS1-202ENST00000338546 MRPL34Q9BQ48 92 aaKnown RBP9.29□□□□□ -0.92
HPS1-202ENST00000338546 H3BPC8 53 aa9.28□□□□□ -0.92
HPS1-202ENST00000338546 MP68P56378 58 aa9.28□□□□□ -0.92
HPS1-202ENST00000338546 SNURFQ9Y675 71 aa9.28□□□□□ -0.92
HPS1-202ENST00000338546 H7BZZ5 65 aa9.26□□□□□ -0.93
HPS1-202ENST00000338546 Q5VSD8 79 aa9.26□□□□□ -0.93
HPS1-202ENST00000338546 HSPG2P98160 4391 aa9.24□□□□□ -0.93
HPS1-202ENST00000338546 RYR1P21817 5038 aa9.24□□□□□ -0.93
HPS1-202ENST00000338546 LINC00313P59037 77 aa9.24□□□□□ -0.93
HPS1-202ENST00000338546 NOTCH2NLQ7Z3S9 236 aa9.24□□□□□ -0.93
HPS1-202ENST00000338546 ZCCHC13Q8WW36 166 aaKnown RBP9.24□□□□□ -0.93
HPS1-202ENST00000338546 TRAV22A0A0B4J277 110 aa9.2□□□□□ -0.94
HPS1-202ENST00000338546 H0Y9P7 68 aa9.2□□□□□ -0.94
HPS1-202ENST00000338546 ATP5EP56381 51 aaPredicted RBP9.18□□□□□ -0.94
HPS1-202ENST00000338546 BIRC6Q9NR09 4857 aa9.18□□□□□ -0.94
HPS1-202ENST00000338546 NDUFS5O43920 106 aa9.17□□□□□ -0.94
HPS1-202ENST00000338546 FAM236DA0A1B0GTK5 79 aa9.16□□□□□ -0.94
HPS1-202ENST00000338546 FAM236CP0DP71 79 aa9.16□□□□□ -0.94
HPS1-202ENST00000338546 Q8N9P0 234 aaPredicted RBP9.16□□□□□ -0.94
HPS1-202ENST00000338546 KRTAP10-8P60410 259 aa9.15□□□□□ -0.95
HPS1-202ENST00000338546 Q8N1X5 172 aa9.15□□□□□ -0.95
HPS1-202ENST00000338546 LINC00208Q96KT6 92 aa9.15□□□□□ -0.95
HPS1-202ENST00000338546 KRTAP17-1Q9BYP8 105 aa9.13□□□□□ -0.95
HPS1-202ENST00000338546 EPPK1P58107 5090 aaKnown RBP9.12□□□□□ -0.95
HPS1-202ENST00000338546 KRTAP16-1A8MUX0 517 aa9.12□□□□□ -0.95
HPS1-202ENST00000338546 RPS28P62857 69 aaKnown RBP9.12□□□□□ -0.95
HPS1-202ENST00000338546 C1orf64Q8NEQ6 169 aa9.12□□□□□ -0.95
HPS1-202ENST00000338546 LCE2BO14633 110 aa9.11□□□□□ -0.95
HPS1-202ENST00000338546 KRTAP13-3Q3SY46 172 aa9.07□□□□□ -0.96
HPS1-202ENST00000338546 TNXBP22105 4242 aa9.05□□□□□ -0.96
HPS1-202ENST00000338546 KIAA1109Q2LD37 5005 aa9.04□□□□□ -0.96
HPS1-202ENST00000338546 LOC101927531A0A1B0GV80 90 aa9.04□□□□□ -0.96
HPS1-202ENST00000338546 SPANXA2-OT1Q8N9U9 137 aa9.04□□□□□ -0.96
HPS1-202ENST00000338546 Q5W150 140 aa9.03□□□□□ -0.96
HPS1-202ENST00000338546 SERP1Q9Y6X1 66 aa9.03□□□□□ -0.96
HPS1-202ENST00000338546 FLG2Q5D862 2391 aaPredicted RBP9.02□□□□□ -0.97
HPS1-202ENST00000338546 FAT3Q8TDW7 4589 aa9□□□□□ -0.97
HPS1-202ENST00000338546 CYP4F30PQ9H0H9 118 aa8.99□□□□□ -0.97
HPS1-202ENST00000338546 FP248Q71RG6 208 aaPredicted RBP8.99□□□□□ -0.97
HPS1-202ENST00000338546 LRP1Q07954 4544 aaKnown RBP8.97□□□□□ -0.97
HPS1-202ENST00000338546 OXTP01178 125 aa8.96□□□□□ -0.97
HPS1-202ENST00000338546 IGLV7-46A0A075B6I9 117 aa8.94□□□□□ -0.98
HPS1-202ENST00000338546 MT1HL1P0DM35 61 aa8.94□□□□□ -0.98
HPS1-202ENST00000338546 C20orf166-AS1Q96NR2 134 aa8.94□□□□□ -0.98
HPS1-202ENST00000338546 A8MUU9 505 aa8.93□□□□□ -0.98
HPS1-202ENST00000338546 RETNLBQ9BQ08 111 aa8.93□□□□□ -0.98
HPS1-202ENST00000338546 IGKV2-30P06310 120 aa8.9□□□□□ -0.98
HPS1-202ENST00000338546 PCOTHQ58A44 107 aa8.89□□□□□ -0.99
HPS1-202ENST00000338546 C9orf92A6NGG3 77 aa8.88□□□□□ -0.99
HPS1-202ENST00000338546 DMBT1Q9UGM3 2413 aaPredicted RBP8.85□□□□□ -0.99
HPS1-202ENST00000338546 Q75L30 129 aa8.85□□□□□ -0.99
HPS1-202ENST00000338546 PRR4Q16378 134 aa8.83□□□□□ -1
HPS1-202ENST00000338546 SMIM26A0A096LP01 95 aa8.82□□□□□ -1
HPS1-202ENST00000338546 MYCBP2O75592 4640 aa8.78□□□□□ -1
HPS1-202ENST00000338546 C7orf65Q6ZTY9 151 aa8.78□□□□□ -1
HPS1-202ENST00000338546 HRES1P13985 223 aa8.78□□□□□ -1
HPS1-202ENST00000338546 IGKV2D-30A0A075B6S6 120 aa8.77□□□□□ -1.01
HPS1-202ENST00000338546 KRTAP4-5Q9BYR2 181 aa8.77□□□□□ -1.01
HPS1-202ENST00000338546 HERC2O95714 4834 aa8.75□□□□□ -1.01
HPS1-202ENST00000338546 PCLOQ9Y6V0 5065 aa8.71□□□□□ -1.02
HPS1-202ENST00000338546 DMAC1Q96GE9 116 aa8.71□□□□□ -1.02
HPS1-202ENST00000338546 ACYP2P14621 99 aa8.7□□□□□ -1.02
HPS1-202ENST00000338546 COA5Q86WW8 74 aa8.7□□□□□ -1.02
HPS1-202ENST00000338546 RPL37P61927 97 aaKnown RBP8.69□□□□□ -1.02
HPS1-202ENST00000338546 XP32Q5T750 250 aa8.69□□□□□ -1.02
HPS1-202ENST00000338546 ATP11AUNQ6ZP68 121 aa8.69□□□□□ -1.02
HPS1-202ENST00000338546 TPRXLQ17RH7 258 aa8.67□□□□□ -1.02
HPS1-202ENST00000338546 A8MUN3 132 aa8.63□□□□□ -1.03
HPS1-202ENST00000338546 SPINK7P58062 85 aa8.63□□□□□ -1.03
HPS1-202ENST00000338546 Q1T7F1 81 aa8.61□□□□□ -1.03
HPS1-202ENST00000338546 V9GYY9 64 aa8.61□□□□□ -1.03
HPS1-202ENST00000338546 J3QL48 77 aa8.6□□□□□ -1.03
HPS1-202ENST00000338546 ABCA13Q86UQ4 5058 aa8.59□□□□□ -1.03
HPS1-202ENST00000338546 LCE2AQ5TA79 106 aaPredicted RBP8.56□□□□□ -1.04
HPS1-202ENST00000338546 MPLKIPQ8TAP9 179 aa8.55□□□□□ -1.04
HPS1-202ENST00000338546 CHKB-CPT1BH3BT56 60 aa8.53□□□□□ -1.04
HPS1-202ENST00000338546 C4orf26Q17RF5 130 aa8.52□□□□□ -1.04
HPS1-202ENST00000338546 COX6B2Q6YFQ2 88 aa8.47□□□□□ -1.05
HPS1-202ENST00000338546 LINC01558Q9Y6Z2 57 aa8.45□□□□□ -1.06
HPS1-202ENST00000338546 KRTAP3-1Q9BYR8 98 aa8.43□□□□□ -1.06
HPS1-202ENST00000338546 SPTSSBQ8NFR3 76 aa8.39□□□□□ -1.07
HPS1-202ENST00000338546 SEC61BP60468 96 aaKnown RBP8.37□□□□□ -1.07
HPS1-202ENST00000338546 LCE2CQ5TA81 110 aa8.37□□□□□ -1.07
HPS1-202ENST00000338546 PSPHP1O15172 72 aa8.35□□□□□ -1.07
HPS1-202ENST00000338546 PRR15LQ9BU68 103 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms