RNA–Protein interactions for RNA: ENST00000337908.4

MS4A4A-201, Transcript of membrane spanning 4-domains A4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A4A, Length 1,604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-201ENST00000337908 Q5VSD8 79 aa6.34□□□□□ -1.39
MS4A4A-201ENST00000337908 SPAG11AQ6PDA7 123 aa6.34□□□□□ -1.39
MS4A4A-201ENST00000337908 PRR26Q8N8Z3 221 aa6.34□□□□□ -1.39
MS4A4A-201ENST00000337908 SPINK1P00995 79 aa6.33□□□□□ -1.4
MS4A4A-201ENST00000337908 LINC00304Q8N9R0 145 aa6.33□□□□□ -1.4
MS4A4A-201ENST00000337908 Q5XG85 94 aa6.32□□□□□ -1.4
MS4A4A-201ENST00000337908 WFDC13Q8IUB5 93 aa6.32□□□□□ -1.4
MS4A4A-201ENST00000337908 CASC2Q6XLA1 102 aa6.32□□□□□ -1.4
MS4A4A-201ENST00000337908 A0A1B0GVX0 72 aa6.31□□□□□ -1.4
MS4A4A-201ENST00000337908 CCDC179H3BU77 68 aa6.31□□□□□ -1.4
MS4A4A-201ENST00000337908 IGHV6-1A0A0B4J1U7 121 aa6.3□□□□□ -1.4
MS4A4A-201ENST00000337908 DYNC1H1Q14204 4646 aaKnown RBP6.29□□□□□ -1.4
MS4A4A-201ENST00000337908 KMT2CQ8NEZ4 4911 aaKnown RBP6.29□□□□□ -1.4
MS4A4A-201ENST00000337908 RPS29P62273 56 aaKnown RBP6.28□□□□□ -1.4
MS4A4A-201ENST00000337908 LRP1BQ9NZR2 4599 aa6.28□□□□□ -1.4
MS4A4A-201ENST00000337908 hDV103S1A0JD37 113 aa6.28□□□□□ -1.4
MS4A4A-201ENST00000337908 C8orf17Q9NRJ1 99 aa6.28□□□□□ -1.4
MS4A4A-201ENST00000337908 MMP24-AS1A0A0U1RRL7 71 aa6.27□□□□□ -1.41
MS4A4A-201ENST00000337908 PKHD1P08F94 4074 aa6.27□□□□□ -1.41
MS4A4A-201ENST00000337908 C8orf87E5RJ46 101 aa6.26□□□□□ -1.41
MS4A4A-201ENST00000337908 C1orf195Q5TG92 126 aa6.26□□□□□ -1.41
MS4A4A-201ENST00000337908 OCR1Q9BZK8 76 aa6.25□□□□□ -1.41
MS4A4A-201ENST00000337908 KRTAP29-1A8MX34 341 aaPredicted RBP6.25□□□□□ -1.41
MS4A4A-201ENST00000337908 Q8N1X5 172 aa6.24□□□□□ -1.41
MS4A4A-201ENST00000337908 C20orf197Q8N268 126 aa6.23□□□□□ -1.41
MS4A4A-201ENST00000337908 TMEM254Q8TBM7 123 aa6.23□□□□□ -1.41
MS4A4A-201ENST00000337908 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
MS4A4A-201ENST00000337908 NDUFS5O43920 106 aa6.21□□□□□ -1.41
MS4A4A-201ENST00000337908 MRPL34Q9BQ48 92 aaKnown RBP6.21□□□□□ -1.41
MS4A4A-201ENST00000337908 APOBP04114 4563 aaKnown RBP6.21□□□□□ -1.41
MS4A4A-201ENST00000337908 RYR3Q15413 4870 aa6.21□□□□□ -1.42
MS4A4A-201ENST00000337908 LINC00313P59037 77 aa6.21□□□□□ -1.42
MS4A4A-201ENST00000337908 C5orf47Q569G3 176 aa6.21□□□□□ -1.42
MS4A4A-201ENST00000337908 TP53AIP1Q9HCN2 124 aa6.21□□□□□ -1.42
MS4A4A-201ENST00000337908 MP68P56378 58 aa6.2□□□□□ -1.42
MS4A4A-201ENST00000337908 VPS13BQ7Z7G8 4022 aa6.2□□□□□ -1.42
MS4A4A-201ENST00000337908 KRTAP4-2Q9BYR5 136 aa6.17□□□□□ -1.42
MS4A4A-201ENST00000337908 KLKP1Q107X0 134 aa6.17□□□□□ -1.42
MS4A4A-201ENST00000337908 SNURFQ9Y675 71 aa6.17□□□□□ -1.42
MS4A4A-201ENST00000337908 NDUFC1O43677 76 aa6.16□□□□□ -1.42
MS4A4A-201ENST00000337908 NOTCH2NLQ7Z3S9 236 aa6.16□□□□□ -1.42
MS4A4A-201ENST00000337908 H0Y9P7 68 aa6.15□□□□□ -1.42
MS4A4A-201ENST00000337908 H3BPC8 53 aa6.14□□□□□ -1.43
MS4A4A-201ENST00000337908 KRTAP10-8P60410 259 aa6.14□□□□□ -1.43
MS4A4A-201ENST00000337908 TRAV22A0A0B4J277 110 aa6.14□□□□□ -1.43
MS4A4A-201ENST00000337908 A0A0U1RQV1 116 aa6.14□□□□□ -1.43
MS4A4A-201ENST00000337908 TMEM258P61165 79 aa6.12□□□□□ -1.43
MS4A4A-201ENST00000337908 LINC00208Q96KT6 92 aa6.11□□□□□ -1.43
MS4A4A-201ENST00000337908 CYSTM1Q9H1C7 97 aa6.1□□□□□ -1.43
MS4A4A-201ENST00000337908 PKHD1L1Q86WI1 4243 aa6.09□□□□□ -1.43
MS4A4A-201ENST00000337908 OXTP01178 125 aa6.09□□□□□ -1.43
MS4A4A-201ENST00000337908 C1orf64Q8NEQ6 169 aa6.09□□□□□ -1.43
MS4A4A-201ENST00000337908 RETNLBQ9BQ08 111 aa6.09□□□□□ -1.43
MS4A4A-201ENST00000337908 Q8N9P0 234 aaPredicted RBP6.08□□□□□ -1.44
MS4A4A-201ENST00000337908 KRTAP17-1Q9BYP8 105 aa6.08□□□□□ -1.44
MS4A4A-201ENST00000337908 H7BZZ5 65 aa6.07□□□□□ -1.44
MS4A4A-201ENST00000337908 FAT1Q14517 4588 aa6.07□□□□□ -1.44
MS4A4A-201ENST00000337908 KRTAP16-1A8MUX0 517 aa6.07□□□□□ -1.44
MS4A4A-201ENST00000337908 FAM236DA0A1B0GTK5 79 aa6.06□□□□□ -1.44
MS4A4A-201ENST00000337908 FAM236CP0DP71 79 aa6.06□□□□□ -1.44
MS4A4A-201ENST00000337908 ATP5EP56381 51 aaPredicted RBP6.06□□□□□ -1.44
MS4A4A-201ENST00000337908 FP248Q71RG6 208 aaPredicted RBP6.06□□□□□ -1.44
MS4A4A-201ENST00000337908 ZCCHC13Q8WW36 166 aaKnown RBP6.06□□□□□ -1.44
MS4A4A-201ENST00000337908 RYR1P21817 5038 aa6.05□□□□□ -1.44
MS4A4A-201ENST00000337908 HSPG2P98160 4391 aa6.05□□□□□ -1.44
MS4A4A-201ENST00000337908 C9orf92A6NGG3 77 aa6.04□□□□□ -1.44
MS4A4A-201ENST00000337908 LOC101927531A0A1B0GV80 90 aa6.03□□□□□ -1.44
MS4A4A-201ENST00000337908 MT1HL1P0DM35 61 aa6.02□□□□□ -1.45
MS4A4A-201ENST00000337908 IGLV7-46A0A075B6I9 117 aa5.99□□□□□ -1.45
MS4A4A-201ENST00000337908 Q5W150 140 aa5.99□□□□□ -1.45
MS4A4A-201ENST00000337908 EPPK1P58107 5090 aaKnown RBP5.99□□□□□ -1.45
MS4A4A-201ENST00000337908 PCOTHQ58A44 107 aa5.98□□□□□ -1.45
MS4A4A-201ENST00000337908 KRTAP4-5Q9BYR2 181 aa5.98□□□□□ -1.45
MS4A4A-201ENST00000337908 C20orf166-AS1Q96NR2 134 aa5.97□□□□□ -1.45
MS4A4A-201ENST00000337908 BIRC6Q9NR09 4857 aa5.97□□□□□ -1.45
MS4A4A-201ENST00000337908 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
MS4A4A-201ENST00000337908 FLG2Q5D862 2391 aaPredicted RBP5.96□□□□□ -1.45
MS4A4A-201ENST00000337908 PRR4Q16378 134 aa5.96□□□□□ -1.45
MS4A4A-201ENST00000337908 KRTAP13-3Q3SY46 172 aa5.96□□□□□ -1.45
MS4A4A-201ENST00000337908 A8MUU9 505 aa5.96□□□□□ -1.46
MS4A4A-201ENST00000337908 SPANXA2-OT1Q8N9U9 137 aa5.96□□□□□ -1.46
MS4A4A-201ENST00000337908 CYP4F30PQ9H0H9 118 aa5.94□□□□□ -1.46
MS4A4A-201ENST00000337908 IGKV2-30P06310 120 aa5.93□□□□□ -1.46
MS4A4A-201ENST00000337908 Q75L30 129 aa5.93□□□□□ -1.46
MS4A4A-201ENST00000337908 SERP1Q9Y6X1 66 aa5.93□□□□□ -1.46
MS4A4A-201ENST00000337908 IGKV2D-30A0A075B6S6 120 aa5.92□□□□□ -1.46
MS4A4A-201ENST00000337908 KRTAP4-11Q9BYQ6 195 aa5.92□□□□□ -1.46
MS4A4A-201ENST00000337908 RPS28P62857 69 aaKnown RBP5.91□□□□□ -1.46
MS4A4A-201ENST00000337908 C7orf65Q6ZTY9 151 aa5.91□□□□□ -1.46
MS4A4A-201ENST00000337908 ATP11AUNQ6ZP68 121 aa5.9□□□□□ -1.46
MS4A4A-201ENST00000337908 FAT3Q8TDW7 4589 aa5.86□□□□□ -1.47
MS4A4A-201ENST00000337908 RPL37P61927 97 aaKnown RBP5.86□□□□□ -1.47
MS4A4A-201ENST00000337908 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
MS4A4A-201ENST00000337908 HRES1P13985 223 aa5.85□□□□□ -1.47
MS4A4A-201ENST00000337908 TPRXLQ17RH7 258 aa5.85□□□□□ -1.47
MS4A4A-201ENST00000337908 LRP1Q07954 4544 aaKnown RBP5.85□□□□□ -1.47
MS4A4A-201ENST00000337908 TNXBP22105 4242 aa5.84□□□□□ -1.47
MS4A4A-201ENST00000337908 DMBT1Q9UGM3 2413 aaPredicted RBP5.84□□□□□ -1.47
MS4A4A-201ENST00000337908 ACYP2P14621 99 aa5.81□□□□□ -1.48
MS4A4A-201ENST00000337908 SPINK7P58062 85 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms