RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 LAMA1P25391 3075 aa4.76□□□□□ -1.65
TNPO1-201ENST00000337273 M0R2T5 61 aa4.74□□□□□ -1.65
TNPO1-201ENST00000337273 MXRA5Q9NR99 2828 aa4.74□□□□□ -1.65
TNPO1-201ENST00000337273 TGP01266 2768 aa4.72□□□□□ -1.65
TNPO1-201ENST00000337273 ATMQ13315 3056 aa4.72□□□□□ -1.65
TNPO1-201ENST00000337273 UNC80Q8N2C7 3258 aa4.72□□□□□ -1.65
TNPO1-201ENST00000337273 NDUFAF8A1L188 74 aa4.71□□□□□ -1.65
TNPO1-201ENST00000337273 KRTAP16-1A8MUX0 517 aa4.71□□□□□ -1.66
TNPO1-201ENST00000337273 PKD1L1Q8TDX9 2849 aa4.71□□□□□ -1.66
TNPO1-201ENST00000337273 A6NN06 94 aa4.71□□□□□ -1.66
TNPO1-201ENST00000337273 M0QZ58 72 aa4.7□□□□□ -1.66
TNPO1-201ENST00000337273 DNAH14Q0VDD8 3507 aa4.7□□□□□ -1.66
TNPO1-201ENST00000337273 KRTAP25-1Q3LHN0 102 aa4.7□□□□□ -1.66
TNPO1-201ENST00000337273 DMXL1Q9Y485 3027 aa4.69□□□□□ -1.66
TNPO1-201ENST00000337273 KRTAP1-5Q9BYS1 174 aa4.69□□□□□ -1.66
TNPO1-201ENST00000337273 PANO1I0J062 215 aa4.68□□□□□ -1.66
TNPO1-201ENST00000337273 LAMA3Q16787 3333 aa4.66□□□□□ -1.66
TNPO1-201ENST00000337273 CFAP47Q6ZTR5 3102 aa4.66□□□□□ -1.66
TNPO1-201ENST00000337273 PLAC4Q8WY50 150 aa4.65□□□□□ -1.67
TNPO1-201ENST00000337273 C10orf95Q9H7T3 257 aa4.64□□□□□ -1.67
TNPO1-201ENST00000337273 KRTAP11-1Q8IUC1 163 aa4.63□□□□□ -1.67
TNPO1-201ENST00000337273 TENM4Q6N022 2769 aa4.63□□□□□ -1.67
TNPO1-201ENST00000337273 SPTBN5Q9NRC6 3674 aaKnown RBP4.63□□□□□ -1.67
TNPO1-201ENST00000337273 VCANP13611 3396 aa4.62□□□□□ -1.67
TNPO1-201ENST00000337273 Q5VSD8 79 aa4.62□□□□□ -1.67
TNPO1-201ENST00000337273 WDFY3Q8IZQ1 3526 aa4.62□□□□□ -1.67
TNPO1-201ENST00000337273 KRTAP10-1P60331 282 aa4.59□□□□□ -1.67
TNPO1-201ENST00000337273 REV3LO60673 3130 aa4.59□□□□□ -1.67
TNPO1-201ENST00000337273 CELSR1Q9NYQ6 3014 aa4.58□□□□□ -1.68
TNPO1-201ENST00000337273 C20orf166-AS1Q96NR2 134 aa4.58□□□□□ -1.68
TNPO1-201ENST00000337273 KRTAP10-2P60368 255 aa4.56□□□□□ -1.68
TNPO1-201ENST00000337273 SMG1Q96Q15 3661 aaKnown RBP4.55□□□□□ -1.68
TNPO1-201ENST00000337273 KRTAP13-1Q8IUC0 172 aa4.54□□□□□ -1.68
TNPO1-201ENST00000337273 A8MUU9 505 aa4.54□□□□□ -1.68
TNPO1-201ENST00000337273 MYO15AQ9UKN7 3530 aa4.52□□□□□ -1.69
TNPO1-201ENST00000337273 Q6ZRN7 208 aaPredicted RBP4.51□□□□□ -1.69
TNPO1-201ENST00000337273 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
TNPO1-201ENST00000337273 TENM2Q9NT68 2774 aa4.5□□□□□ -1.69
TNPO1-201ENST00000337273 TNP1P09430 55 aa4.48□□□□□ -1.69
TNPO1-201ENST00000337273 SZT2Q5T011 3432 aa4.48□□□□□ -1.69
TNPO1-201ENST00000337273 KRTAP7-1Q8IUC3 87 aa4.47□□□□□ -1.69
TNPO1-201ENST00000337273 DMDP11532 3685 aa4.44□□□□□ -1.7
TNPO1-201ENST00000337273 CDH23Q9H251 3354 aa4.44□□□□□ -1.7
TNPO1-201ENST00000337273 SPEGQ15772 3267 aa4.43□□□□□ -1.7
TNPO1-201ENST00000337273 KRTAP13-2Q52LG2 175 aa4.43□□□□□ -1.7
TNPO1-201ENST00000337273 FBN1P35555 2871 aaKnown RBP4.4□□□□□ -1.71
TNPO1-201ENST00000337273 SPENQ96T58 3664 aaKnown RBP4.38□□□□□ -1.71
TNPO1-201ENST00000337273 ZFHX3Q15911 3703 aa4.37□□□□□ -1.71
TNPO1-201ENST00000337273 EYSQ5T1H1 3165 aa4.36□□□□□ -1.71
TNPO1-201ENST00000337273 FBN3Q75N90 2809 aa4.35□□□□□ -1.71
TNPO1-201ENST00000337273 LAMA5O15230 3695 aa4.34□□□□□ -1.71
TNPO1-201ENST00000337273 CSMD1Q96PZ7 3565 aa4.33□□□□□ -1.72
TNPO1-201ENST00000337273 COL7A1Q02388 2944 aa4.33□□□□□ -1.72
TNPO1-201ENST00000337273 MEGF8Q7Z7M0 2845 aa4.31□□□□□ -1.72
TNPO1-201ENST00000337273 A0A1B0GVY2 172 aa4.31□□□□□ -1.72
TNPO1-201ENST00000337273 USP34Q70CQ2 3546 aa4.3□□□□□ -1.72
TNPO1-201ENST00000337273 H0YAA0 97 aa4.3□□□□□ -1.72
TNPO1-201ENST00000337273 KRTAP21-3Q3LHN1 58 aa4.29□□□□□ -1.72
TNPO1-201ENST00000337273 VPS13CQ709C8 3753 aa4.28□□□□□ -1.72
TNPO1-201ENST00000337273 P0C880 135 aa4.28□□□□□ -1.72
TNPO1-201ENST00000337273 ZFHX4Q86UP3 3567 aa4.26□□□□□ -1.73
TNPO1-201ENST00000337273 KRTAP10-8P60410 259 aa4.26□□□□□ -1.73
TNPO1-201ENST00000337273 OTOGQ6ZRI0 2925 aa4.25□□□□□ -1.73
TNPO1-201ENST00000337273 NBPF19A0A087WUL8 3843 aa4.25□□□□□ -1.73
TNPO1-201ENST00000337273 LOC400499M0QZD8 3231 aa4.25□□□□□ -1.73
TNPO1-201ENST00000337273 KRTAP1-4P0C5Y4 121 aa4.24□□□□□ -1.73
TNPO1-201ENST00000337273 ASPMQ8IZT6 3477 aa4.23□□□□□ -1.73
TNPO1-201ENST00000337273 XP32Q5T750 250 aa4.23□□□□□ -1.73
TNPO1-201ENST00000337273 TPRXLQ17RH7 258 aa4.23□□□□□ -1.73
TNPO1-201ENST00000337273 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
TNPO1-201ENST00000337273 DCHS1Q96JQ0 3298 aa4.17□□□□□ -1.74
TNPO1-201ENST00000337273 RELNP78509 3460 aa4.12□□□□□ -1.75
TNPO1-201ENST00000337273 KRTAP13-3Q3SY46 172 aa4.11□□□□□ -1.75
TNPO1-201ENST00000337273 KRTAP12-2P59991 146 aa4.08□□□□□ -1.76
TNPO1-201ENST00000337273 CUBNO60494 3623 aa4.06□□□□□ -1.76
TNPO1-201ENST00000337273 SVEP1Q4LDE5 3571 aa4.04□□□□□ -1.76
TNPO1-201ENST00000337273 AKAP9Q99996 3911 aa4.03□□□□□ -1.76
TNPO1-201ENST00000337273 TRRAPQ9Y4A5 3859 aa4.03□□□□□ -1.76
TNPO1-201ENST00000337273 KRTAP13-4Q3LI77 160 aa4.03□□□□□ -1.76
TNPO1-201ENST00000337273 CSMD3Q7Z407 3707 aa4.01□□□□□ -1.77
TNPO1-201ENST00000337273 KRTAP10-10P60014 251 aa4□□□□□ -1.77
TNPO1-201ENST00000337273 KRTAP12-1P59990 96 aa3.94□□□□□ -1.78
TNPO1-201ENST00000337273 INE1O15225 51 aa3.89□□□□□ -1.79
TNPO1-201ENST00000337273 KRTAP3-1Q9BYR8 98 aa3.83□□□□□ -1.8
TNPO1-201ENST00000337273 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
TNPO1-201ENST00000337273 KRTAP10-6P60371 365 aaPredicted RBP3.78□□□□□ -1.8
TNPO1-201ENST00000337273 LYSTQ99698 3801 aa3.77□□□□□ -1.81
TNPO1-201ENST00000337273 ALMS1Q8TCU4 4167 aa3.77□□□□□ -1.81
TNPO1-201ENST00000337273 KRTAP15-1Q3LI76 137 aa3.76□□□□□ -1.81
TNPO1-201ENST00000337273 KRTAP23-1A1A580 65 aa3.74□□□□□ -1.81
TNPO1-201ENST00000337273 BSNQ9UPA5 3926 aa3.73□□□□□ -1.81
TNPO1-201ENST00000337273 CSMD2Q7Z408 3487 aa3.65□□□□□ -1.83
TNPO1-201ENST00000337273 MUC3AQ02505 3323 aa3.64□□□□□ -1.83
TNPO1-201ENST00000337273 HECTD4Q9Y4D8 3996 aa3.61□□□□□ -1.83
TNPO1-201ENST00000337273 KRTAP3-2Q9BYR7 98 aa3.61□□□□□ -1.83
TNPO1-201ENST00000337273 KRTAP3-3Q9BYR6 98 aa3.6□□□□□ -1.83
TNPO1-201ENST00000337273 KRTAP10-12P60413 245 aa3.59□□□□□ -1.84
TNPO1-201ENST00000337273 LORP23490 312 aaPredicted RBP3.56□□□□□ -1.84
TNPO1-201ENST00000337273 KRTAP12-3P60328 96 aa3.5□□□□□ -1.85
TNPO1-201ENST00000337273 MT1HL1P0DM35 61 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms