RNA–Protein interactions for RNA: ENST00000335749.4

TNRC6C-202, Transcript of trinucleotide repeat containing 6C, humanhuman

APPRIS P4 TSL 5 BASIC

Gene TNRC6C, Length 9,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6C-202ENST00000335749 PDZD2O15018 2839 aa6.2□□□□□ -1.42
TNRC6C-202ENST00000335749 TENM1Q9UKZ4 2725 aa6.19□□□□□ -1.42
TNRC6C-202ENST00000335749 CRYBG3Q68DQ2 2970 aa6.18□□□□□ -1.42
TNRC6C-202ENST00000335749 P0C880 135 aa6.17□□□□□ -1.42
TNRC6C-202ENST00000335749 XIRP2A4UGR9 3374 aa6.13□□□□□ -1.43
TNRC6C-202ENST00000335749 MKI67P46013 3256 aaKnown RBP6.12□□□□□ -1.43
TNRC6C-202ENST00000335749 KRTAP10-8P60410 259 aa6.11□□□□□ -1.43
TNRC6C-202ENST00000335749 Q6ZRN7 208 aaPredicted RBP6.11□□□□□ -1.43
TNRC6C-202ENST00000335749 REV3LO60673 3130 aa6.1□□□□□ -1.43
TNRC6C-202ENST00000335749 ZZEF1O43149 2961 aa6.1□□□□□ -1.43
TNRC6C-202ENST00000335749 UNC80Q8N2C7 3258 aa6.08□□□□□ -1.44
TNRC6C-202ENST00000335749 SRRM2Q9UQ35 2752 aaKnown RBP6.08□□□□□ -1.44
TNRC6C-202ENST00000335749 KRTAP13-2Q52LG2 175 aa6.07□□□□□ -1.44
TNRC6C-202ENST00000335749 CELSR3Q9NYQ7 3312 aa6.07□□□□□ -1.44
TNRC6C-202ENST00000335749 H0YAA0 97 aa6.07□□□□□ -1.44
TNRC6C-202ENST00000335749 DCHS2Q6V1P9 2916 aa6.06□□□□□ -1.44
TNRC6C-202ENST00000335749 LAMA1P25391 3075 aa6.06□□□□□ -1.44
TNRC6C-202ENST00000335749 ZANQ9Y493 2812 aa6.04□□□□□ -1.44
TNRC6C-202ENST00000335749 KRTAP13-1Q8IUC0 172 aa6.03□□□□□ -1.44
TNRC6C-202ENST00000335749 TNRC18O15417 2968 aaPredicted RBP6.03□□□□□ -1.44
TNRC6C-202ENST00000335749 HTTP42858 3142 aa6.02□□□□□ -1.45
TNRC6C-202ENST00000335749 BOD1L1Q8NFC6 3051 aa5.99□□□□□ -1.45
TNRC6C-202ENST00000335749 KRTAP7-1Q8IUC3 87 aa5.99□□□□□ -1.45
TNRC6C-202ENST00000335749 DMXL1Q9Y485 3027 aa5.98□□□□□ -1.45
TNRC6C-202ENST00000335749 FBN2P35556 2912 aa5.96□□□□□ -1.46
TNRC6C-202ENST00000335749 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
TNRC6C-202ENST00000335749 COL6A3P12111 3177 aa5.95□□□□□ -1.46
TNRC6C-202ENST00000335749 LAMA3Q16787 3333 aa5.95□□□□□ -1.46
TNRC6C-202ENST00000335749 ATMQ13315 3056 aa5.94□□□□□ -1.46
TNRC6C-202ENST00000335749 ADGRG4Q8IZF6 3080 aa5.93□□□□□ -1.46
TNRC6C-202ENST00000335749 DNAH14Q0VDD8 3507 aa5.9□□□□□ -1.46
TNRC6C-202ENST00000335749 BRCA2P51587 3418 aa5.89□□□□□ -1.47
TNRC6C-202ENST00000335749 CELSR1Q9NYQ6 3014 aa5.87□□□□□ -1.47
TNRC6C-202ENST00000335749 A0A1B0GVY2 172 aa5.86□□□□□ -1.47
TNRC6C-202ENST00000335749 MXRA5Q9NR99 2828 aa5.84□□□□□ -1.47
TNRC6C-202ENST00000335749 VWFP04275 2813 aa5.84□□□□□ -1.48
TNRC6C-202ENST00000335749 USP34Q70CQ2 3546 aa5.83□□□□□ -1.48
TNRC6C-202ENST00000335749 XP32Q5T750 250 aa5.82□□□□□ -1.48
TNRC6C-202ENST00000335749 TENM4Q6N022 2769 aa5.82□□□□□ -1.48
TNRC6C-202ENST00000335749 HRNRQ86YZ3 2850 aaPredicted RBP5.82□□□□□ -1.48
TNRC6C-202ENST00000335749 KRTAP10-10P60014 251 aa5.8□□□□□ -1.48
TNRC6C-202ENST00000335749 CFAP47Q6ZTR5 3102 aa5.77□□□□□ -1.49
TNRC6C-202ENST00000335749 VCANP13611 3396 aa5.77□□□□□ -1.49
TNRC6C-202ENST00000335749 PKD1L1Q8TDX9 2849 aa5.76□□□□□ -1.49
TNRC6C-202ENST00000335749 CDH23Q9H251 3354 aa5.7□□□□□ -1.5
TNRC6C-202ENST00000335749 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
TNRC6C-202ENST00000335749 TPRXLQ17RH7 258 aa5.68□□□□□ -1.5
TNRC6C-202ENST00000335749 KRTAP13-4Q3LI77 160 aa5.63□□□□□ -1.51
TNRC6C-202ENST00000335749 TENM2Q9NT68 2774 aa5.63□□□□□ -1.51
TNRC6C-202ENST00000335749 KRTAP1-4P0C5Y4 121 aa5.62□□□□□ -1.51
TNRC6C-202ENST00000335749 COL7A1Q02388 2944 aa5.59□□□□□ -1.51
TNRC6C-202ENST00000335749 SPEGQ15772 3267 aa5.59□□□□□ -1.51
TNRC6C-202ENST00000335749 ZFHX3Q15911 3703 aa5.58□□□□□ -1.52
TNRC6C-202ENST00000335749 KRTAP13-3Q3SY46 172 aa5.57□□□□□ -1.52
TNRC6C-202ENST00000335749 MYO15AQ9UKN7 3530 aa5.55□□□□□ -1.52
TNRC6C-202ENST00000335749 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
TNRC6C-202ENST00000335749 INE1O15225 51 aa5.53□□□□□ -1.52
TNRC6C-202ENST00000335749 MEGF8Q7Z7M0 2845 aa5.5□□□□□ -1.53
TNRC6C-202ENST00000335749 WDFY3Q8IZQ1 3526 aa5.47□□□□□ -1.53
TNRC6C-202ENST00000335749 EYSQ5T1H1 3165 aa5.46□□□□□ -1.53
TNRC6C-202ENST00000335749 KRTAP12-1P59990 96 aa5.46□□□□□ -1.53
TNRC6C-202ENST00000335749 SPTBN5Q9NRC6 3674 aaKnown RBP5.43□□□□□ -1.54
TNRC6C-202ENST00000335749 SZT2Q5T011 3432 aa5.42□□□□□ -1.54
TNRC6C-202ENST00000335749 FBN3Q75N90 2809 aa5.39□□□□□ -1.55
TNRC6C-202ENST00000335749 ZFHX4Q86UP3 3567 aa5.38□□□□□ -1.55
TNRC6C-202ENST00000335749 FBN1P35555 2871 aaKnown RBP5.36□□□□□ -1.55
TNRC6C-202ENST00000335749 LOC400499M0QZD8 3231 aa5.33□□□□□ -1.56
TNRC6C-202ENST00000335749 ASPMQ8IZT6 3477 aa5.31□□□□□ -1.56
TNRC6C-202ENST00000335749 SMG1Q96Q15 3661 aaKnown RBP5.29□□□□□ -1.56
TNRC6C-202ENST00000335749 LAMA5O15230 3695 aa5.26□□□□□ -1.57
TNRC6C-202ENST00000335749 KRTAP21-3Q3LHN1 58 aa5.26□□□□□ -1.57
TNRC6C-202ENST00000335749 OTOGQ6ZRI0 2925 aa5.24□□□□□ -1.57
TNRC6C-202ENST00000335749 RELNP78509 3460 aa5.22□□□□□ -1.57
TNRC6C-202ENST00000335749 NBPF19A0A087WUL8 3843 aa5.2□□□□□ -1.58
TNRC6C-202ENST00000335749 DCHS1Q96JQ0 3298 aa5.2□□□□□ -1.58
TNRC6C-202ENST00000335749 DMDP11532 3685 aa5.19□□□□□ -1.58
TNRC6C-202ENST00000335749 KRTAP3-1Q9BYR8 98 aa5.19□□□□□ -1.58
TNRC6C-202ENST00000335749 CSMD1Q96PZ7 3565 aa5.18□□□□□ -1.58
TNRC6C-202ENST00000335749 KRTAP10-6P60371 365 aaPredicted RBP5.18□□□□□ -1.58
TNRC6C-202ENST00000335749 CRCT1Q9UGL9 99 aa5.18□□□□□ -1.58
TNRC6C-202ENST00000335749 SPENQ96T58 3664 aaKnown RBP5.16□□□□□ -1.58
TNRC6C-202ENST00000335749 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
TNRC6C-202ENST00000335749 CUBNO60494 3623 aa5□□□□□ -1.61
TNRC6C-202ENST00000335749 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
TNRC6C-202ENST00000335749 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
TNRC6C-202ENST00000335749 VPS13CQ709C8 3753 aa4.97□□□□□ -1.61
TNRC6C-202ENST00000335749 TRRAPQ9Y4A5 3859 aa4.96□□□□□ -1.62
TNRC6C-202ENST00000335749 SVEP1Q4LDE5 3571 aa4.93□□□□□ -1.62
TNRC6C-202ENST00000335749 KRTAP3-2Q9BYR7 98 aa4.93□□□□□ -1.62
TNRC6C-202ENST00000335749 KRTAP10-5P60370 271 aa4.89□□□□□ -1.63
TNRC6C-202ENST00000335749 KRTAP3-3Q9BYR6 98 aa4.87□□□□□ -1.63
TNRC6C-202ENST00000335749 MUC3AQ02505 3323 aa4.84□□□□□ -1.63
TNRC6C-202ENST00000335749 CSMD3Q7Z407 3707 aa4.81□□□□□ -1.64
TNRC6C-202ENST00000335749 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
TNRC6C-202ENST00000335749 AKAP9Q99996 3911 aa4.8□□□□□ -1.64
TNRC6C-202ENST00000335749 ALMS1Q8TCU4 4167 aa4.76□□□□□ -1.65
TNRC6C-202ENST00000335749 KRTAP8-1Q8IUC2 63 aa4.62□□□□□ -1.67
TNRC6C-202ENST00000335749 CSMD2Q7Z408 3487 aa4.57□□□□□ -1.68
TNRC6C-202ENST00000335749 MT1HL1P0DM35 61 aa4.53□□□□□ -1.68
TNRC6C-202ENST00000335749 BSNQ9UPA5 3926 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms