RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 IGLV7-43P04211 117 aa7.89□□□□□ -1.15
RC3H2-201ENST00000335387 LOC101927531A0A1B0GV80 90 aa7.89□□□□□ -1.15
RC3H2-201ENST00000335387 PRR4Q16378 134 aa7.89□□□□□ -1.15
RC3H2-201ENST00000335387 PKD1P98161 4303 aa7.88□□□□□ -1.15
RC3H2-201ENST00000335387 Q5VV11 94 aa7.88□□□□□ -1.15
RC3H2-201ENST00000335387 COA5Q86WW8 74 aa7.86□□□□□ -1.15
RC3H2-201ENST00000335387 SSBP3-AS1Q7Z2R9 100 aa7.86□□□□□ -1.15
RC3H2-201ENST00000335387 IGHV6-1A0A0B4J1U7 121 aa7.84□□□□□ -1.15
RC3H2-201ENST00000335387 C8orf87E5RJ46 101 aa7.84□□□□□ -1.15
RC3H2-201ENST00000335387 Q75L30 129 aa7.83□□□□□ -1.16
RC3H2-201ENST00000335387 FAT2Q9NYQ8 4349 aa7.83□□□□□ -1.16
RC3H2-201ENST00000335387 C1orf134Q5TEV5 83 aa7.83□□□□□ -1.16
RC3H2-201ENST00000335387 A0A087X002 238 aa7.82□□□□□ -1.16
RC3H2-201ENST00000335387 NOTCH2NLQ7Z3S9 236 aa7.82□□□□□ -1.16
RC3H2-201ENST00000335387 CDK2AP2O75956 126 aa7.82□□□□□ -1.16
RC3H2-201ENST00000335387 A8MUN3 132 aa7.82□□□□□ -1.16
RC3H2-201ENST00000335387 Q6ZSA8 131 aa7.81□□□□□ -1.16
RC3H2-201ENST00000335387 PSPHP1O15172 72 aa7.8□□□□□ -1.16
RC3H2-201ENST00000335387 LINC01558Q9Y6Z2 57 aa7.8□□□□□ -1.16
RC3H2-201ENST00000335387 ANAPC11Q9NYG5 84 aa7.79□□□□□ -1.16
RC3H2-201ENST00000335387 HRES1P13985 223 aa7.76□□□□□ -1.17
RC3H2-201ENST00000335387 Q5W150 140 aa7.75□□□□□ -1.17
RC3H2-201ENST00000335387 PCOTHQ58A44 107 aa7.75□□□□□ -1.17
RC3H2-201ENST00000335387 SACSQ9NZJ4 4579 aa7.74□□□□□ -1.17
RC3H2-201ENST00000335387 RYR2Q92736 4967 aa7.73□□□□□ -1.17
RC3H2-201ENST00000335387 CIRBP-AS1Q8TBR5 109 aa7.73□□□□□ -1.17
RC3H2-201ENST00000335387 NDUFS5O43920 106 aa7.72□□□□□ -1.17
RC3H2-201ENST00000335387 LRP1BQ9NZR2 4599 aa7.72□□□□□ -1.17
RC3H2-201ENST00000335387 KMT2CQ8NEZ4 4911 aaKnown RBP7.72□□□□□ -1.17
RC3H2-201ENST00000335387 KRTAP16-1A8MUX0 517 aa7.71□□□□□ -1.18
RC3H2-201ENST00000335387 KRTAP13-2Q52LG2 175 aa7.71□□□□□ -1.18
RC3H2-201ENST00000335387 PRR15LQ9BU68 103 aa7.71□□□□□ -1.18
RC3H2-201ENST00000335387 PRR26Q8N8Z3 221 aa7.69□□□□□ -1.18
RC3H2-201ENST00000335387 KRTAP10-2P60368 255 aa7.69□□□□□ -1.18
RC3H2-201ENST00000335387 DMAC1Q96GE9 116 aa7.68□□□□□ -1.18
RC3H2-201ENST00000335387 FAM229AH3BQW9 127 aa7.67□□□□□ -1.18
RC3H2-201ENST00000335387 KRTAP1-4P0C5Y4 121 aa7.67□□□□□ -1.18
RC3H2-201ENST00000335387 CHKB-CPT1BH3BT56 60 aa7.67□□□□□ -1.18
RC3H2-201ENST00000335387 RYR3Q15413 4870 aa7.66□□□□□ -1.18
RC3H2-201ENST00000335387 LINC00313P59037 77 aa7.65□□□□□ -1.18
RC3H2-201ENST00000335387 LCA10Q71F78 164 aa7.65□□□□□ -1.18
RC3H2-201ENST00000335387 CDC42SE1Q9NRR8 79 aa7.65□□□□□ -1.18
RC3H2-201ENST00000335387 ATP11AUNQ6ZP68 121 aa7.65□□□□□ -1.19
RC3H2-201ENST00000335387 VPS13BQ7Z7G8 4022 aa7.65□□□□□ -1.19
RC3H2-201ENST00000335387 IGKV2-30P06310 120 aa7.64□□□□□ -1.19
RC3H2-201ENST00000335387 LY6G6CO95867 125 aa7.64□□□□□ -1.19
RC3H2-201ENST00000335387 HYDINQ4G0P3 5121 aa7.63□□□□□ -1.19
RC3H2-201ENST00000335387 ACYP2P14621 99 aa7.63□□□□□ -1.19
RC3H2-201ENST00000335387 SPINK6Q6UWN8 80 aa7.63□□□□□ -1.19
RC3H2-201ENST00000335387 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
RC3H2-201ENST00000335387 KRTAP10-1P60331 282 aa7.62□□□□□ -1.19
RC3H2-201ENST00000335387 A8MU10 97 aa7.61□□□□□ -1.19
RC3H2-201ENST00000335387 PKHD1L1Q86WI1 4243 aa7.61□□□□□ -1.19
RC3H2-201ENST00000335387 PMAIP1Q13794 54 aa7.61□□□□□ -1.19
RC3H2-201ENST00000335387 RPS29P62273 56 aaKnown RBP7.6□□□□□ -1.19
RC3H2-201ENST00000335387 SPAG11AQ6PDA7 123 aa7.6□□□□□ -1.19
RC3H2-201ENST00000335387 A6NED7 52 aa7.56□□□□□ -1.2
RC3H2-201ENST00000335387 A6NN06 94 aa7.56□□□□□ -1.2
RC3H2-201ENST00000335387 SPINK1P00995 79 aa7.53□□□□□ -1.2
RC3H2-201ENST00000335387 A0A1B0GVY2 172 aa7.52□□□□□ -1.21
RC3H2-201ENST00000335387 APOBP04114 4563 aaKnown RBP7.51□□□□□ -1.21
RC3H2-201ENST00000335387 SPINK7P58062 85 aa7.5□□□□□ -1.21
RC3H2-201ENST00000335387 KTN1-AS1Q86SY8 53 aa7.49□□□□□ -1.21
RC3H2-201ENST00000335387 PKHD1P08F94 4074 aa7.47□□□□□ -1.21
RC3H2-201ENST00000335387 IGKV2D-30A0A075B6S6 120 aa7.46□□□□□ -1.21
RC3H2-201ENST00000335387 TYMSOSQ8TAI1 123 aa7.43□□□□□ -1.22
RC3H2-201ENST00000335387 DYNC1H1Q14204 4646 aaKnown RBP7.43□□□□□ -1.22
RC3H2-201ENST00000335387 PLA2G1BP04054 148 aaKnown RBP7.43□□□□□ -1.22
RC3H2-201ENST00000335387 SPATA8Q6RVD6 105 aa7.41□□□□□ -1.22
RC3H2-201ENST00000335387 C4orf48Q5BLP8 95 aa7.4□□□□□ -1.23
RC3H2-201ENST00000335387 SEC61GP60059 68 aa7.38□□□□□ -1.23
RC3H2-201ENST00000335387 SPTSSBQ8NFR3 76 aa7.38□□□□□ -1.23
RC3H2-201ENST00000335387 EPPK1P58107 5090 aaKnown RBP7.38□□□□□ -1.23
RC3H2-201ENST00000335387 KRTAP10-4P60372 401 aaPredicted RBP7.37□□□□□ -1.23
RC3H2-201ENST00000335387 LINC00304Q8N9R0 145 aa7.36□□□□□ -1.23
RC3H2-201ENST00000335387 A0A1B0GU69 56 aa7.36□□□□□ -1.23
RC3H2-201ENST00000335387 C7orf65Q6ZTY9 151 aa7.36□□□□□ -1.23
RC3H2-201ENST00000335387 C20orf166-AS1Q96NR2 134 aa7.36□□□□□ -1.23
RC3H2-201ENST00000335387 A8MUU9 505 aa7.35□□□□□ -1.23
RC3H2-201ENST00000335387 RETNLBQ9BQ08 111 aa7.35□□□□□ -1.23
RC3H2-201ENST00000335387 HERC2O95714 4834 aa7.35□□□□□ -1.23
RC3H2-201ENST00000335387 UQCR11O14957 56 aa7.28□□□□□ -1.24
RC3H2-201ENST00000335387 TNXBP22105 4242 aa7.26□□□□□ -1.25
RC3H2-201ENST00000335387 MIR22HGQ0VDD5 57 aa7.24□□□□□ -1.25
RC3H2-201ENST00000335387 Q8N1X5 172 aa7.24□□□□□ -1.25
RC3H2-201ENST00000335387 RBM12B-AS1Q9P1G2 102 aa7.24□□□□□ -1.25
RC3H2-201ENST00000335387 HSPG2P98160 4391 aa7.23□□□□□ -1.25
RC3H2-201ENST00000335387 FAT1Q14517 4588 aa7.19□□□□□ -1.26
RC3H2-201ENST00000335387 KRTAP3-1Q9BYR8 98 aa7.19□□□□□ -1.26
RC3H2-201ENST00000335387 FAT3Q8TDW7 4589 aa7.19□□□□□ -1.26
RC3H2-201ENST00000335387 RYR1P21817 5038 aa7.16□□□□□ -1.26
RC3H2-201ENST00000335387 KRTAP17-1Q9BYP8 105 aa7.14□□□□□ -1.27
RC3H2-201ENST00000335387 SMR3BP02814 79 aaPredicted RBP7.08□□□□□ -1.28
RC3H2-201ENST00000335387 KIAA1109Q2LD37 5005 aa7.07□□□□□ -1.28
RC3H2-201ENST00000335387 C9orf92A6NGG3 77 aa7.07□□□□□ -1.28
RC3H2-201ENST00000335387 COX6B2Q6YFQ2 88 aa7.06□□□□□ -1.28
RC3H2-201ENST00000335387 H0YAA0 97 aa7.06□□□□□ -1.28
RC3H2-201ENST00000335387 KRTAP10-8P60410 259 aa7.05□□□□□ -1.28
RC3H2-201ENST00000335387 LRP1Q07954 4544 aaKnown RBP7.04□□□□□ -1.28
RC3H2-201ENST00000335387 H1FX-AS1Q4G0G2 97 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms