RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 PKD1P98161 4303 aa11.13□□□□□ -0.63
RFTN1-201ENST00000334133 FAT2Q9NYQ8 4349 aa11.11□□□□□ -0.63
RFTN1-201ENST00000334133 ASB16-AS1Q495Z4 193 aa11.09□□□□□ -0.63
RFTN1-201ENST00000334133 CYP4F30PQ9H0H9 118 aa11.08□□□□□ -0.64
RFTN1-201ENST00000334133 MRPL34Q9BQ48 92 aaKnown RBP11.07□□□□□ -0.64
RFTN1-201ENST00000334133 H3BPC8 53 aa11.05□□□□□ -0.64
RFTN1-201ENST00000334133 KRTAP13-2Q52LG2 175 aa11.03□□□□□ -0.64
RFTN1-201ENST00000334133 VPS13BQ7Z7G8 4022 aa11.03□□□□□ -0.64
RFTN1-201ENST00000334133 PSPHP1O15172 72 aa11.02□□□□□ -0.65
RFTN1-201ENST00000334133 CD164Q04900 197 aa11.01□□□□□ -0.65
RFTN1-201ENST00000334133 TP53AIP1Q9HCN2 124 aa11.01□□□□□ -0.65
RFTN1-201ENST00000334133 PKHD1P08F94 4074 aa11.01□□□□□ -0.65
RFTN1-201ENST00000334133 Q6ZSA8 131 aa11□□□□□ -0.65
RFTN1-201ENST00000334133 BRK1Q8WUW1 75 aa11□□□□□ -0.65
RFTN1-201ENST00000334133 Q5W150 140 aa10.98□□□□□ -0.65
RFTN1-201ENST00000334133 SSBP3-AS1Q7Z2R9 100 aa10.98□□□□□ -0.65
RFTN1-201ENST00000334133 SPANXA2-OT1Q8N9U9 137 aa10.98□□□□□ -0.65
RFTN1-201ENST00000334133 RETNLBQ9BQ08 111 aa10.97□□□□□ -0.65
RFTN1-201ENST00000334133 IGLV7-46A0A075B6I9 117 aa10.91□□□□□ -0.66
RFTN1-201ENST00000334133 Q1T7F1 81 aa10.91□□□□□ -0.66
RFTN1-201ENST00000334133 KRTAP1-4P0C5Y4 121 aa10.9□□□□□ -0.66
RFTN1-201ENST00000334133 COA5Q86WW8 74 aa10.9□□□□□ -0.66
RFTN1-201ENST00000334133 C1orf195Q5TG92 126 aa10.89□□□□□ -0.67
RFTN1-201ENST00000334133 A8MUN3 132 aa10.89□□□□□ -0.67
RFTN1-201ENST00000334133 SACSQ9NZJ4 4579 aa10.88□□□□□ -0.67
RFTN1-201ENST00000334133 PLA2G1BP04054 148 aaKnown RBP10.87□□□□□ -0.67
RFTN1-201ENST00000334133 PRO0628Q9UI54 55 aa10.87□□□□□ -0.67
RFTN1-201ENST00000334133 LINC00313P59037 77 aa10.86□□□□□ -0.67
RFTN1-201ENST00000334133 SMR3BP02814 79 aaPredicted RBP10.85□□□□□ -0.67
RFTN1-201ENST00000334133 Q8N9P0 234 aaPredicted RBP10.85□□□□□ -0.67
RFTN1-201ENST00000334133 KRTAP13-3Q3SY46 172 aa10.8□□□□□ -0.68
RFTN1-201ENST00000334133 TYMSOSQ8TAI1 123 aa10.79□□□□□ -0.68
RFTN1-201ENST00000334133 C8orf87E5RJ46 101 aa10.78□□□□□ -0.68
RFTN1-201ENST00000334133 FAT1Q14517 4588 aa10.77□□□□□ -0.69
RFTN1-201ENST00000334133 HRES1P13985 223 aa10.77□□□□□ -0.69
RFTN1-201ENST00000334133 LOC101927531A0A1B0GV80 90 aa10.76□□□□□ -0.69
RFTN1-201ENST00000334133 C4orf48Q5BLP8 95 aa10.76□□□□□ -0.69
RFTN1-201ENST00000334133 PRR15LQ9BU68 103 aa10.76□□□□□ -0.69
RFTN1-201ENST00000334133 DYNC1H1Q14204 4646 aaKnown RBP10.76□□□□□ -0.69
RFTN1-201ENST00000334133 SPAG11AQ6PDA7 123 aa10.76□□□□□ -0.69
RFTN1-201ENST00000334133 PRR26Q8N8Z3 221 aa10.76□□□□□ -0.69
RFTN1-201ENST00000334133 A8MU10 97 aa10.74□□□□□ -0.69
RFTN1-201ENST00000334133 Q5VV11 94 aa10.74□□□□□ -0.69
RFTN1-201ENST00000334133 LIMD2Q9BT23 127 aa10.71□□□□□ -0.7
RFTN1-201ENST00000334133 V9GYY9 64 aa10.7□□□□□ -0.7
RFTN1-201ENST00000334133 KRTAP16-1A8MUX0 517 aa10.69□□□□□ -0.7
RFTN1-201ENST00000334133 CHKB-CPT1BH3BT56 60 aa10.69□□□□□ -0.7
RFTN1-201ENST00000334133 FAM229AH3BQW9 127 aa10.67□□□□□ -0.7
RFTN1-201ENST00000334133 KRTAP21-3Q3LHN1 58 aa10.66□□□□□ -0.7
RFTN1-201ENST00000334133 IGKV2D-30A0A075B6S6 120 aa10.65□□□□□ -0.71
RFTN1-201ENST00000334133 IGKV2-30P06310 120 aa10.65□□□□□ -0.71
RFTN1-201ENST00000334133 SPINK1P00995 79 aa10.62□□□□□ -0.71
RFTN1-201ENST00000334133 KMT2CQ8NEZ4 4911 aaKnown RBP10.62□□□□□ -0.71
RFTN1-201ENST00000334133 LINC00304Q8N9R0 145 aa10.61□□□□□ -0.71
RFTN1-201ENST00000334133 APOBP04114 4563 aaKnown RBP10.58□□□□□ -0.72
RFTN1-201ENST00000334133 A6NED7 52 aa10.55□□□□□ -0.72
RFTN1-201ENST00000334133 ACYP2P14621 99 aa10.54□□□□□ -0.72
RFTN1-201ENST00000334133 A0A1B0GVY2 172 aa10.53□□□□□ -0.72
RFTN1-201ENST00000334133 C9orf92A6NGG3 77 aa10.53□□□□□ -0.72
RFTN1-201ENST00000334133 RYR2Q92736 4967 aa10.52□□□□□ -0.72
RFTN1-201ENST00000334133 LINC01558Q9Y6Z2 57 aa10.52□□□□□ -0.73
RFTN1-201ENST00000334133 DMAC1Q96GE9 116 aa10.5□□□□□ -0.73
RFTN1-201ENST00000334133 Q75L30 129 aa10.5□□□□□ -0.73
RFTN1-201ENST00000334133 LCA10Q71F78 164 aa10.48□□□□□ -0.73
RFTN1-201ENST00000334133 KRTAP10-4P60372 401 aaPredicted RBP10.46□□□□□ -0.73
RFTN1-201ENST00000334133 SPTSSBQ8NFR3 76 aa10.46□□□□□ -0.74
RFTN1-201ENST00000334133 SPINK7P58062 85 aa10.45□□□□□ -0.74
RFTN1-201ENST00000334133 C7orf65Q6ZTY9 151 aa10.42□□□□□ -0.74
RFTN1-201ENST00000334133 Q8N1X5 172 aa10.41□□□□□ -0.74
RFTN1-201ENST00000334133 LRP1Q07954 4544 aaKnown RBP10.39□□□□□ -0.75
RFTN1-201ENST00000334133 PMAIP1Q13794 54 aa10.35□□□□□ -0.75
RFTN1-201ENST00000334133 PKHD1L1Q86WI1 4243 aa10.34□□□□□ -0.75
RFTN1-201ENST00000334133 RPS29P62273 56 aaKnown RBP10.34□□□□□ -0.75
RFTN1-201ENST00000334133 FLG2Q5D862 2391 aaPredicted RBP10.32□□□□□ -0.76
RFTN1-201ENST00000334133 CDC42SE1Q9NRR8 79 aa10.29□□□□□ -0.76
RFTN1-201ENST00000334133 DMBT1Q9UGM3 2413 aaPredicted RBP10.29□□□□□ -0.76
RFTN1-201ENST00000334133 A0A1B0GU69 56 aa10.27□□□□□ -0.76
RFTN1-201ENST00000334133 RYR3Q15413 4870 aa10.26□□□□□ -0.77
RFTN1-201ENST00000334133 A8MUU9 505 aa10.21□□□□□ -0.77
RFTN1-201ENST00000334133 ATP11AUNQ6ZP68 121 aa10.21□□□□□ -0.77
RFTN1-201ENST00000334133 C20orf166-AS1Q96NR2 134 aa10.21□□□□□ -0.78
RFTN1-201ENST00000334133 HSPG2P98160 4391 aa10.18□□□□□ -0.78
RFTN1-201ENST00000334133 MYCBP2O75592 4640 aa10.17□□□□□ -0.78
RFTN1-201ENST00000334133 Q5VSD8 79 aa10.16□□□□□ -0.78
RFTN1-201ENST00000334133 FAT3Q8TDW7 4589 aa10.14□□□□□ -0.79
RFTN1-201ENST00000334133 TNXBP22105 4242 aa10.13□□□□□ -0.79
RFTN1-201ENST00000334133 KRTAP17-1Q9BYP8 105 aa10.12□□□□□ -0.79
RFTN1-201ENST00000334133 KIAA1109Q2LD37 5005 aa10.11□□□□□ -0.79
RFTN1-201ENST00000334133 KRTAP3-1Q9BYR8 98 aa10.11□□□□□ -0.79
RFTN1-201ENST00000334133 A6NN06 94 aa10.09□□□□□ -0.79
RFTN1-201ENST00000334133 RYR1P21817 5038 aa10.05□□□□□ -0.8
RFTN1-201ENST00000334133 KRTAP10-8P60410 259 aa10.04□□□□□ -0.8
RFTN1-201ENST00000334133 MIR22HGQ0VDD5 57 aa10.02□□□□□ -0.81
RFTN1-201ENST00000334133 UQCR11O14957 56 aa10.01□□□□□ -0.81
RFTN1-201ENST00000334133 KTN1-AS1Q86SY8 53 aa9.98□□□□□ -0.81
RFTN1-201ENST00000334133 SPATA8Q6RVD6 105 aa9.96□□□□□ -0.81
RFTN1-201ENST00000334133 SEC61GP60059 68 aa9.95□□□□□ -0.82
RFTN1-201ENST00000334133 EPPK1P58107 5090 aaKnown RBP9.91□□□□□ -0.82
RFTN1-201ENST00000334133 COX6B2Q6YFQ2 88 aa9.88□□□□□ -0.83
RFTN1-201ENST00000334133 XP32Q5T750 250 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms