RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 DCHS1Q96JQ0 3298 aa6.49□□□□□ -1.37
POLR1B-202ENST00000333990 MUC3AQ02505 3323 aa6.49□□□□□ -1.37
POLR1B-202ENST00000333990 TENM3Q9P273 2699 aa6.49□□□□□ -1.37
POLR1B-202ENST00000333990 CYSTM1Q9H1C7 97 aa6.47□□□□□ -1.37
POLR1B-202ENST00000333990 DMDP11532 3685 aa6.47□□□□□ -1.37
POLR1B-202ENST00000333990 KRTAP13-2Q52LG2 175 aa6.46□□□□□ -1.37
POLR1B-202ENST00000333990 LINC01554Q52M75 96 aa6.46□□□□□ -1.38
POLR1B-202ENST00000333990 S4R3F8 94 aa6.46□□□□□ -1.38
POLR1B-202ENST00000333990 CELSR1Q9NYQ6 3014 aa6.44□□□□□ -1.38
POLR1B-202ENST00000333990 KRTAP29-1A8MX34 341 aaPredicted RBP6.44□□□□□ -1.38
POLR1B-202ENST00000333990 OTOGQ6ZRI0 2925 aa6.43□□□□□ -1.38
POLR1B-202ENST00000333990 TENM2Q9NT68 2774 aa6.42□□□□□ -1.38
POLR1B-202ENST00000333990 RELNP78509 3460 aa6.42□□□□□ -1.38
POLR1B-202ENST00000333990 SPINT4Q6UDR6 99 aa6.4□□□□□ -1.38
POLR1B-202ENST00000333990 A0A1B0GU33 70 aa6.4□□□□□ -1.39
POLR1B-202ENST00000333990 A0A0D9SG42 100 aa6.38□□□□□ -1.39
POLR1B-202ENST00000333990 CRIPTQ9P021 101 aa6.38□□□□□ -1.39
POLR1B-202ENST00000333990 Q1T7F1 81 aa6.37□□□□□ -1.39
POLR1B-202ENST00000333990 Q75L30 129 aa6.36□□□□□ -1.39
POLR1B-202ENST00000333990 LAMA5O15230 3695 aa6.36□□□□□ -1.39
POLR1B-202ENST00000333990 DMAC1Q96GE9 116 aa6.35□□□□□ -1.39
POLR1B-202ENST00000333990 ASPMQ8IZT6 3477 aa6.35□□□□□ -1.39
POLR1B-202ENST00000333990 NOTCH2NLQ7Z3S9 236 aa6.34□□□□□ -1.39
POLR1B-202ENST00000333990 LINC01558Q9Y6Z2 57 aa6.34□□□□□ -1.39
POLR1B-202ENST00000333990 CAMK2N1Q7Z7J9 78 aa6.34□□□□□ -1.4
POLR1B-202ENST00000333990 ZFHX4Q86UP3 3567 aa6.33□□□□□ -1.4
POLR1B-202ENST00000333990 PKD1L1Q8TDX9 2849 aa6.33□□□□□ -1.4
POLR1B-202ENST00000333990 CDC42SE1Q9NRR8 79 aa6.33□□□□□ -1.4
POLR1B-202ENST00000333990 R4GN34 69 aa6.31□□□□□ -1.4
POLR1B-202ENST00000333990 RPL37P61927 97 aaKnown RBP6.3□□□□□ -1.4
POLR1B-202ENST00000333990 KRTAP1-4P0C5Y4 121 aa6.29□□□□□ -1.4
POLR1B-202ENST00000333990 TGP01266 2768 aa6.25□□□□□ -1.41
POLR1B-202ENST00000333990 H1FX-AS1Q4G0G2 97 aa6.25□□□□□ -1.41
POLR1B-202ENST00000333990 FBN1P35555 2871 aaKnown RBP6.23□□□□□ -1.41
POLR1B-202ENST00000333990 SMG1Q96Q15 3661 aaKnown RBP6.22□□□□□ -1.41
POLR1B-202ENST00000333990 VWFP04275 2813 aa6.22□□□□□ -1.41
POLR1B-202ENST00000333990 A8MUU9 505 aa6.22□□□□□ -1.41
POLR1B-202ENST00000333990 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.42
POLR1B-202ENST00000333990 A0A1B0GVY2 172 aa6.2□□□□□ -1.42
POLR1B-202ENST00000333990 M0QZ58 72 aa6.16□□□□□ -1.42
POLR1B-202ENST00000333990 NBPF19A0A087WUL8 3843 aa6.14□□□□□ -1.43
POLR1B-202ENST00000333990 TPRXLQ17RH7 258 aa6.13□□□□□ -1.43
POLR1B-202ENST00000333990 ADM2Q7Z4H4 148 aa6.13□□□□□ -1.43
POLR1B-202ENST00000333990 KTN1-AS1Q86SY8 53 aa6.13□□□□□ -1.43
POLR1B-202ENST00000333990 CSMD1Q96PZ7 3565 aa6.12□□□□□ -1.43
POLR1B-202ENST00000333990 LCA10Q71F78 164 aa6.12□□□□□ -1.43
POLR1B-202ENST00000333990 Q5VV11 94 aa6.11□□□□□ -1.43
POLR1B-202ENST00000333990 XP32Q5T750 250 aa6.1□□□□□ -1.43
POLR1B-202ENST00000333990 ZFHX3Q15911 3703 aa6.09□□□□□ -1.43
POLR1B-202ENST00000333990 BSNQ9UPA5 3926 aa6.08□□□□□ -1.44
POLR1B-202ENST00000333990 PLAC4Q8WY50 150 aa6.07□□□□□ -1.44
POLR1B-202ENST00000333990 SPENQ96T58 3664 aaKnown RBP6.06□□□□□ -1.44
POLR1B-202ENST00000333990 KRTAP10-8P60410 259 aa6.06□□□□□ -1.44
POLR1B-202ENST00000333990 CUBNO60494 3623 aa6.04□□□□□ -1.44
POLR1B-202ENST00000333990 PRAC1Q96KF2 57 aa6.03□□□□□ -1.44
POLR1B-202ENST00000333990 KRTAP13-3Q3SY46 172 aa6□□□□□ -1.45
POLR1B-202ENST00000333990 SVEP1Q4LDE5 3571 aa6□□□□□ -1.45
POLR1B-202ENST00000333990 ANK3Q12955 4377 aaKnown RBP5.97□□□□□ -1.45
POLR1B-202ENST00000333990 SPATA8Q6RVD6 105 aa5.96□□□□□ -1.46
POLR1B-202ENST00000333990 KRTAP16-1A8MUX0 517 aa5.95□□□□□ -1.46
POLR1B-202ENST00000333990 FBN3Q75N90 2809 aa5.94□□□□□ -1.46
POLR1B-202ENST00000333990 A8MU10 97 aa5.93□□□□□ -1.46
POLR1B-202ENST00000333990 ROMO1P60602 79 aa5.93□□□□□ -1.46
POLR1B-202ENST00000333990 LUZP6Q538Z0 58 aa5.91□□□□□ -1.46
POLR1B-202ENST00000333990 SRRM2Q9UQ35 2752 aaKnown RBP5.88□□□□□ -1.47
POLR1B-202ENST00000333990 CSMD2Q7Z408 3487 aa5.86□□□□□ -1.47
POLR1B-202ENST00000333990 H3BS24 57 aa5.83□□□□□ -1.48
POLR1B-202ENST00000333990 MEGF8Q7Z7M0 2845 aa5.79□□□□□ -1.48
POLR1B-202ENST00000333990 TRRAPQ9Y4A5 3859 aa5.76□□□□□ -1.49
POLR1B-202ENST00000333990 COL7A1Q02388 2944 aa5.74□□□□□ -1.49
POLR1B-202ENST00000333990 KRTAP10-10P60014 251 aa5.71□□□□□ -1.5
POLR1B-202ENST00000333990 TNP1P09430 55 aa5.7□□□□□ -1.5
POLR1B-202ENST00000333990 A6NN06 94 aa5.67□□□□□ -1.5
POLR1B-202ENST00000333990 MT1HL1P0DM35 61 aa5.64□□□□□ -1.51
POLR1B-202ENST00000333990 VPS13CQ709C8 3753 aa5.64□□□□□ -1.51
POLR1B-202ENST00000333990 KRTAP10-4P60372 401 aaPredicted RBP5.59□□□□□ -1.52
POLR1B-202ENST00000333990 PRO2289Q9P1D8 64 aa5.58□□□□□ -1.52
POLR1B-202ENST00000333990 P0C880 135 aa5.56□□□□□ -1.52
POLR1B-202ENST00000333990 KRTAP25-1Q3LHN0 102 aa5.55□□□□□ -1.52
POLR1B-202ENST00000333990 ZNF469Q96JG9 3925 aaPredicted RBP5.53□□□□□ -1.52
POLR1B-202ENST00000333990 PP632Q6XCG6 107 aa5.53□□□□□ -1.52
POLR1B-202ENST00000333990 H0YAA0 97 aa5.52□□□□□ -1.53
POLR1B-202ENST00000333990 HUWE1Q7Z6Z7 4374 aaKnown RBP5.51□□□□□ -1.53
POLR1B-202ENST00000333990 KRTAP4-5Q9BYR2 181 aa5.48□□□□□ -1.53
POLR1B-202ENST00000333990 AKAP9Q99996 3911 aa5.46□□□□□ -1.54
POLR1B-202ENST00000333990 A0A0A0MQY5 61 aa5.43□□□□□ -1.54
POLR1B-202ENST00000333990 KRTAP3-1Q9BYR8 98 aa5.42□□□□□ -1.54
POLR1B-202ENST00000333990 DNAH9Q9NYC9 4486 aa5.38□□□□□ -1.55
POLR1B-202ENST00000333990 ALMS1Q8TCU4 4167 aa5.36□□□□□ -1.55
POLR1B-202ENST00000333990 DNHD1Q96M86 4753 aa5.35□□□□□ -1.55
POLR1B-202ENST00000333990 NDUFAF8A1L188 74 aa5.34□□□□□ -1.55
POLR1B-202ENST00000333990 C10orf95Q9H7T3 257 aa5.27□□□□□ -1.57
POLR1B-202ENST00000333990 KRTAP12-1P59990 96 aa5.23□□□□□ -1.57
POLR1B-202ENST00000333990 KRTAP12-2P59991 146 aa5.22□□□□□ -1.57
POLR1B-202ENST00000333990 DNAH5Q8TE73 4624 aa5.22□□□□□ -1.57
POLR1B-202ENST00000333990 KRTAP10-6P60371 365 aaPredicted RBP5.21□□□□□ -1.58
POLR1B-202ENST00000333990 KRTAP13-4Q3LI77 160 aa5.2□□□□□ -1.58
POLR1B-202ENST00000333990 DNAH11Q96DT5 4516 aa5.18□□□□□ -1.58
POLR1B-202ENST00000333990 PLECQ15149 4684 aaKnown RBP5.17□□□□□ -1.58
POLR1B-202ENST00000333990 DNAH1Q9P2D7 4330 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms