RNA–Protein interactions for RNA: ENST00000333175.9

TMEM259-201, Transcript of transmembrane protein 259, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM259, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-201ENST00000333175 CDK2AP2O75956 126 aa13.03□□□□□ -0.32
TMEM259-201ENST00000333175 KRTAP10-1P60331 282 aa13.02□□□□□ -0.32
TMEM259-201ENST00000333175 NDUFS5O43920 106 aa13□□□□□ -0.33
TMEM259-201ENST00000333175 ASB16-AS1Q495Z4 193 aa12.98□□□□□ -0.33
TMEM259-201ENST00000333175 H3BPC8 53 aa12.94□□□□□ -0.34
TMEM259-201ENST00000333175 CYP4F30PQ9H0H9 118 aa12.94□□□□□ -0.34
TMEM259-201ENST00000333175 VPS13BQ7Z7G8 4022 aa12.92□□□□□ -0.34
TMEM259-201ENST00000333175 PCOTHQ58A44 107 aa12.91□□□□□ -0.34
TMEM259-201ENST00000333175 Q6ZSA8 131 aa12.9□□□□□ -0.34
TMEM259-201ENST00000333175 MRPL34Q9BQ48 92 aaKnown RBP12.89□□□□□ -0.35
TMEM259-201ENST00000333175 TP53AIP1Q9HCN2 124 aa12.88□□□□□ -0.35
TMEM259-201ENST00000333175 PKHD1P08F94 4074 aa12.87□□□□□ -0.35
TMEM259-201ENST00000333175 KRTAP13-2Q52LG2 175 aa12.86□□□□□ -0.35
TMEM259-201ENST00000333175 C1orf195Q5TG92 126 aa12.86□□□□□ -0.35
TMEM259-201ENST00000333175 KRTAP21-3Q3LHN1 58 aa12.84□□□□□ -0.35
TMEM259-201ENST00000333175 SSBP3-AS1Q7Z2R9 100 aa12.84□□□□□ -0.35
TMEM259-201ENST00000333175 SPANXA2-OT1Q8N9U9 137 aa12.83□□□□□ -0.35
TMEM259-201ENST00000333175 CD164Q04900 197 aa12.81□□□□□ -0.36
TMEM259-201ENST00000333175 PSPHP1O15172 72 aa12.77□□□□□ -0.36
TMEM259-201ENST00000333175 SACSQ9NZJ4 4579 aa12.77□□□□□ -0.37
TMEM259-201ENST00000333175 Q1T7F1 81 aa12.76□□□□□ -0.37
TMEM259-201ENST00000333175 Q5W150 140 aa12.75□□□□□ -0.37
TMEM259-201ENST00000333175 KRTAP1-4P0C5Y4 121 aa12.74□□□□□ -0.37
TMEM259-201ENST00000333175 IGLV7-46A0A075B6I9 117 aa12.72□□□□□ -0.37
TMEM259-201ENST00000333175 V9GYY9 64 aa12.71□□□□□ -0.38
TMEM259-201ENST00000333175 COA5Q86WW8 74 aa12.67□□□□□ -0.38
TMEM259-201ENST00000333175 RETNLBQ9BQ08 111 aa12.67□□□□□ -0.38
TMEM259-201ENST00000333175 LINC00313P59037 77 aa12.65□□□□□ -0.39
TMEM259-201ENST00000333175 PLA2G1BP04054 148 aaKnown RBP12.64□□□□□ -0.39
TMEM259-201ENST00000333175 KRTAP13-3Q3SY46 172 aa12.64□□□□□ -0.39
TMEM259-201ENST00000333175 C8orf87E5RJ46 101 aa12.63□□□□□ -0.39
TMEM259-201ENST00000333175 A8MUN3 132 aa12.62□□□□□ -0.39
TMEM259-201ENST00000333175 Q8N9P0 234 aaPredicted RBP12.62□□□□□ -0.39
TMEM259-201ENST00000333175 DYNC1H1Q14204 4646 aaKnown RBP12.59□□□□□ -0.39
TMEM259-201ENST00000333175 LOC101927531A0A1B0GV80 90 aa12.58□□□□□ -0.4
TMEM259-201ENST00000333175 A8MU10 97 aa12.57□□□□□ -0.4
TMEM259-201ENST00000333175 TYMSOSQ8TAI1 123 aa12.57□□□□□ -0.4
TMEM259-201ENST00000333175 SMR3BP02814 79 aaPredicted RBP12.57□□□□□ -0.4
TMEM259-201ENST00000333175 SEC61GP60059 68 aa12.56□□□□□ -0.4
TMEM259-201ENST00000333175 LIMD2Q9BT23 127 aa12.53□□□□□ -0.4
TMEM259-201ENST00000333175 C4orf48Q5BLP8 95 aa12.53□□□□□ -0.4
TMEM259-201ENST00000333175 PMAIP1Q13794 54 aa12.52□□□□□ -0.4
TMEM259-201ENST00000333175 HRES1P13985 223 aa12.52□□□□□ -0.41
TMEM259-201ENST00000333175 FAT1Q14517 4588 aa12.51□□□□□ -0.41
TMEM259-201ENST00000333175 Q5VV11 94 aa12.51□□□□□ -0.41
TMEM259-201ENST00000333175 PRR26Q8N8Z3 221 aa12.51□□□□□ -0.41
TMEM259-201ENST00000333175 KRTAP16-1A8MUX0 517 aa12.49□□□□□ -0.41
TMEM259-201ENST00000333175 PRR15LQ9BU68 103 aa12.48□□□□□ -0.41
TMEM259-201ENST00000333175 FAM229AH3BQW9 127 aa12.46□□□□□ -0.42
TMEM259-201ENST00000333175 SPAG11AQ6PDA7 123 aa12.45□□□□□ -0.42
TMEM259-201ENST00000333175 APOBP04114 4563 aaKnown RBP12.42□□□□□ -0.42
TMEM259-201ENST00000333175 CHKB-CPT1BH3BT56 60 aa12.42□□□□□ -0.42
TMEM259-201ENST00000333175 SPINK1P00995 79 aa12.41□□□□□ -0.42
TMEM259-201ENST00000333175 LINC00304Q8N9R0 145 aa12.39□□□□□ -0.43
TMEM259-201ENST00000333175 RYR2Q92736 4967 aa12.37□□□□□ -0.43
TMEM259-201ENST00000333175 IGKV2-30P06310 120 aa12.36□□□□□ -0.43
TMEM259-201ENST00000333175 KMT2CQ8NEZ4 4911 aaKnown RBP12.36□□□□□ -0.43
TMEM259-201ENST00000333175 A0A1B0GVY2 172 aa12.36□□□□□ -0.43
TMEM259-201ENST00000333175 IGKV2D-30A0A075B6S6 120 aa12.34□□□□□ -0.43
TMEM259-201ENST00000333175 SPTSSBQ8NFR3 76 aa12.28□□□□□ -0.44
TMEM259-201ENST00000333175 ACYP2P14621 99 aa12.28□□□□□ -0.44
TMEM259-201ENST00000333175 DMAC1Q96GE9 116 aa12.27□□□□□ -0.45
TMEM259-201ENST00000333175 LCA10Q71F78 164 aa12.26□□□□□ -0.45
TMEM259-201ENST00000333175 LINC01558Q9Y6Z2 57 aa12.26□□□□□ -0.45
TMEM259-201ENST00000333175 KRTAP10-4P60372 401 aaPredicted RBP12.25□□□□□ -0.45
TMEM259-201ENST00000333175 Q75L30 129 aa12.25□□□□□ -0.45
TMEM259-201ENST00000333175 A6NED7 52 aa12.24□□□□□ -0.45
TMEM259-201ENST00000333175 PKHD1L1Q86WI1 4243 aa12.24□□□□□ -0.45
TMEM259-201ENST00000333175 C9orf92A6NGG3 77 aa12.2□□□□□ -0.46
TMEM259-201ENST00000333175 RPS29P62273 56 aaKnown RBP12.17□□□□□ -0.46
TMEM259-201ENST00000333175 ATP11AUNQ6ZP68 121 aa12.13□□□□□ -0.47
TMEM259-201ENST00000333175 KTN1-AS1Q86SY8 53 aa12.13□□□□□ -0.47
TMEM259-201ENST00000333175 C7orf65Q6ZTY9 151 aa12.12□□□□□ -0.47
TMEM259-201ENST00000333175 SPINK7P58062 85 aa12.11□□□□□ -0.47
TMEM259-201ENST00000333175 CDC42SE1Q9NRR8 79 aa12.07□□□□□ -0.48
TMEM259-201ENST00000333175 Q8N1X5 172 aa12.06□□□□□ -0.48
TMEM259-201ENST00000333175 LRP1Q07954 4544 aaKnown RBP12.06□□□□□ -0.48
TMEM259-201ENST00000333175 A6NN06 94 aa12.06□□□□□ -0.48
TMEM259-201ENST00000333175 FLG2Q5D862 2391 aaPredicted RBP12.03□□□□□ -0.48
TMEM259-201ENST00000333175 RBM12B-AS1Q9P1G2 102 aa12.01□□□□□ -0.49
TMEM259-201ENST00000333175 RYR3Q15413 4870 aa11.96□□□□□ -0.49
TMEM259-201ENST00000333175 HSPG2P98160 4391 aa11.96□□□□□ -0.49
TMEM259-201ENST00000333175 C20orf166-AS1Q96NR2 134 aa11.96□□□□□ -0.5
TMEM259-201ENST00000333175 A8MUU9 505 aa11.95□□□□□ -0.5
TMEM259-201ENST00000333175 A0A1B0GU69 56 aa11.93□□□□□ -0.5
TMEM259-201ENST00000333175 TNXBP22105 4242 aa11.93□□□□□ -0.5
TMEM259-201ENST00000333175 FAT3Q8TDW7 4589 aa11.87□□□□□ -0.51
TMEM259-201ENST00000333175 Q5VSD8 79 aa11.85□□□□□ -0.51
TMEM259-201ENST00000333175 DMBT1Q9UGM3 2413 aaPredicted RBP11.85□□□□□ -0.51
TMEM259-201ENST00000333175 RYR1P21817 5038 aa11.8□□□□□ -0.52
TMEM259-201ENST00000333175 KRTAP17-1Q9BYP8 105 aa11.77□□□□□ -0.52
TMEM259-201ENST00000333175 MYCBP2O75592 4640 aa11.76□□□□□ -0.53
TMEM259-201ENST00000333175 KRTAP3-1Q9BYR8 98 aa11.76□□□□□ -0.53
TMEM259-201ENST00000333175 KRTAP10-8P60410 259 aa11.74□□□□□ -0.53
TMEM259-201ENST00000333175 KIAA1109Q2LD37 5005 aa11.74□□□□□ -0.53
TMEM259-201ENST00000333175 PRAC1Q96KF2 57 aa11.66□□□□□ -0.54
TMEM259-201ENST00000333175 UQCR11O14957 56 aa11.65□□□□□ -0.55
TMEM259-201ENST00000333175 MIR22HGQ0VDD5 57 aa11.64□□□□□ -0.55
TMEM259-201ENST00000333175 SPATA8Q6RVD6 105 aa11.62□□□□□ -0.55
TMEM259-201ENST00000333175 ADM2Q7Z4H4 148 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms