RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 A0A087X002 238 aa5.7□□□□□ -1.5
SYN3-201ENST00000332840 IGKV3D-7A0A0C4DH55 119 aa5.7□□□□□ -1.5
SYN3-201ENST00000332840 H3BS24 57 aa5.7□□□□□ -1.5
SYN3-201ENST00000332840 MOBPQ13875 183 aa5.7□□□□□ -1.5
SYN3-201ENST00000332840 SSBP3-AS1Q7Z2R9 100 aa5.7□□□□□ -1.5
SYN3-201ENST00000332840 SCGB1A1P11684 91 aa5.69□□□□□ -1.5
SYN3-201ENST00000332840 A0A087WSZ3 146 aa5.68□□□□□ -1.5
SYN3-201ENST00000332840 CXCL6P80162 114 aa5.68□□□□□ -1.5
SYN3-201ENST00000332840 KRTAP4-9Q9BYQ8 210 aa5.67□□□□□ -1.5
SYN3-201ENST00000332840 KRTAP13-2Q52LG2 175 aa5.66□□□□□ -1.5
SYN3-201ENST00000332840 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
SYN3-201ENST00000332840 LINC00304Q8N9R0 145 aa5.66□□□□□ -1.5
SYN3-201ENST00000332840 BPY2O14599 106 aa5.65□□□□□ -1.5
SYN3-201ENST00000332840 CD164Q04900 197 aa5.65□□□□□ -1.5
SYN3-201ENST00000332840 SPAG11AQ6PDA7 123 aa5.65□□□□□ -1.5
SYN3-201ENST00000332840 PRR4Q16378 134 aa5.64□□□□□ -1.51
SYN3-201ENST00000332840 SS18L2Q9UHA2 77 aa5.64□□□□□ -1.51
SYN3-201ENST00000332840 HIST1H4AP62805 103 aaKnown RBP5.63□□□□□ -1.51
SYN3-201ENST00000332840 HRCT1Q6UXD1 115 aa5.63□□□□□ -1.51
SYN3-201ENST00000332840 LINC00472Q9H8W2 130 aa5.6□□□□□ -1.51
SYN3-201ENST00000332840 A0A087WVE0 104 aa5.59□□□□□ -1.51
SYN3-201ENST00000332840 FAM236AA0A1B0GUQ0 79 aa5.59□□□□□ -1.51
SYN3-201ENST00000332840 FAM236BA0A1B0GV22 79 aa5.59□□□□□ -1.51
SYN3-201ENST00000332840 J3KT08 172 aa5.59□□□□□ -1.51
SYN3-201ENST00000332840 SPINK1P00995 79 aa5.58□□□□□ -1.52
SYN3-201ENST00000332840 IGKV4-1P06312 121 aa5.58□□□□□ -1.52
SYN3-201ENST00000332840 DSCR10P59022 87 aa5.58□□□□□ -1.52
SYN3-201ENST00000332840 DEFB116Q30KQ4 102 aa5.57□□□□□ -1.52
SYN3-201ENST00000332840 ASB16-AS1Q495Z4 193 aa5.57□□□□□ -1.52
SYN3-201ENST00000332840 PCP4P48539 62 aa5.56□□□□□ -1.52
SYN3-201ENST00000332840 RPS29P62273 56 aaKnown RBP5.56□□□□□ -1.52
SYN3-201ENST00000332840 Q5XG85 94 aa5.56□□□□□ -1.52
SYN3-201ENST00000332840 FP248Q71RG6 208 aaPredicted RBP5.56□□□□□ -1.52
SYN3-201ENST00000332840 Q8N9L7 120 aa5.56□□□□□ -1.52
SYN3-201ENST00000332840 KRTAP9-7A8MTY7 169 aa5.55□□□□□ -1.52
SYN3-201ENST00000332840 ATOX1O00244 68 aa5.55□□□□□ -1.52
SYN3-201ENST00000332840 Q96NJ1 140 aa5.55□□□□□ -1.52
SYN3-201ENST00000332840 LIMD2Q9BT23 127 aa5.55□□□□□ -1.52
SYN3-201ENST00000332840 IGLV7-46A0A075B6I9 117 aa5.54□□□□□ -1.52
SYN3-201ENST00000332840 A8MWP4 228 aa5.54□□□□□ -1.52
SYN3-201ENST00000332840 K7EQZ3 153 aa5.54□□□□□ -1.52
SYN3-201ENST00000332840 NDUFB1O75438 58 aa5.54□□□□□ -1.52
SYN3-201ENST00000332840 TPRXLQ17RH7 258 aa5.54□□□□□ -1.52
SYN3-201ENST00000332840 PRR15Q8IV56 129 aa5.53□□□□□ -1.52
SYN3-201ENST00000332840 RETNLBQ9BQ08 111 aa5.53□□□□□ -1.52
SYN3-201ENST00000332840 ANAPC13Q9BS18 74 aa5.53□□□□□ -1.52
SYN3-201ENST00000332840 KRTAP4-2Q9BYR5 136 aa5.53□□□□□ -1.52
SYN3-201ENST00000332840 MUC2Q02817 5179 aa5.52□□□□□ -1.53
SYN3-201ENST00000332840 HCG22E2RYF7 251 aa5.5□□□□□ -1.53
SYN3-201ENST00000332840 SMIM20Q8N5G0 67 aa5.5□□□□□ -1.53
SYN3-201ENST00000332840 C1orf195Q5TG92 126 aa5.49□□□□□ -1.53
SYN3-201ENST00000332840 A0A1B0GVX0 72 aa5.48□□□□□ -1.53
SYN3-201ENST00000332840 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
SYN3-201ENST00000332840 A0A0U1RQV1 116 aa5.47□□□□□ -1.53
SYN3-201ENST00000332840 TRAV7A0A075B6U4 112 aa5.46□□□□□ -1.54
SYN3-201ENST00000332840 LCE5AQ5TCM9 118 aa5.46□□□□□ -1.54
SYN3-201ENST00000332840 CASC2Q6XLA1 102 aa5.46□□□□□ -1.54
SYN3-201ENST00000332840 WFDC13Q8IUB5 93 aa5.46□□□□□ -1.54
SYN3-201ENST00000332840 SERP2Q8N6R1 65 aa5.46□□□□□ -1.54
SYN3-201ENST00000332840 C8orf17Q9NRJ1 99 aa5.46□□□□□ -1.54
SYN3-201ENST00000332840 IGHV6-1A0A0B4J1U7 121 aa5.45□□□□□ -1.54
SYN3-201ENST00000332840 MMP24-AS1A0A0U1RRL7 71 aa5.45□□□□□ -1.54
SYN3-201ENST00000332840 COX7CP15954 63 aa5.45□□□□□ -1.54
SYN3-201ENST00000332840 FAT4Q6V0I7 4981 aa5.45□□□□□ -1.54
SYN3-201ENST00000332840 C8orf87E5RJ46 101 aa5.44□□□□□ -1.54
SYN3-201ENST00000332840 hDV103S1A0JD37 113 aa5.43□□□□□ -1.54
SYN3-201ENST00000332840 UQCRQO14949 82 aa5.43□□□□□ -1.54
SYN3-201ENST00000332840 KRTAP13-3Q3SY46 172 aa5.43□□□□□ -1.54
SYN3-201ENST00000332840 OCR1Q9BZK8 76 aa5.42□□□□□ -1.54
SYN3-201ENST00000332840 TMEM254Q8TBM7 123 aa5.41□□□□□ -1.54
SYN3-201ENST00000332840 CCDC179H3BU77 68 aa5.4□□□□□ -1.54
SYN3-201ENST00000332840 LINC00313P59037 77 aa5.4□□□□□ -1.54
SYN3-201ENST00000332840 MRPL34Q9BQ48 92 aaKnown RBP5.4□□□□□ -1.54
SYN3-201ENST00000332840 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.54
SYN3-201ENST00000332840 SEC61BP60468 96 aaKnown RBP5.38□□□□□ -1.55
SYN3-201ENST00000332840 NOTCH2NLQ7Z3S9 236 aa5.38□□□□□ -1.55
SYN3-201ENST00000332840 TP53AIP1Q9HCN2 124 aa5.37□□□□□ -1.55
SYN3-201ENST00000332840 C5orf47Q569G3 176 aa5.36□□□□□ -1.55
SYN3-201ENST00000332840 NDUFS5O43920 106 aa5.35□□□□□ -1.55
SYN3-201ENST00000332840 C20orf197Q8N268 126 aa5.34□□□□□ -1.55
SYN3-201ENST00000332840 KRTAP16-1A8MUX0 517 aa5.32□□□□□ -1.56
SYN3-201ENST00000332840 MP68P56378 58 aa5.32□□□□□ -1.56
SYN3-201ENST00000332840 Q8N9P0 234 aaPredicted RBP5.32□□□□□ -1.56
SYN3-201ENST00000332840 H3BPC8 53 aa5.31□□□□□ -1.56
SYN3-201ENST00000332840 KLKP1Q107X0 134 aa5.31□□□□□ -1.56
SYN3-201ENST00000332840 TRAV22A0A0B4J277 110 aa5.3□□□□□ -1.56
SYN3-201ENST00000332840 H0Y9P7 68 aa5.3□□□□□ -1.56
SYN3-201ENST00000332840 SNURFQ9Y675 71 aa5.29□□□□□ -1.56
SYN3-201ENST00000332840 NDUFC1O43677 76 aa5.28□□□□□ -1.56
SYN3-201ENST00000332840 MUC17Q685J3 4493 aa5.28□□□□□ -1.56
SYN3-201ENST00000332840 C9orf92A6NGG3 77 aa5.27□□□□□ -1.57
SYN3-201ENST00000332840 LINC00208Q96KT6 92 aa5.27□□□□□ -1.57
SYN3-201ENST00000332840 ZCCHC13Q8WW36 166 aaKnown RBP5.26□□□□□ -1.57
SYN3-201ENST00000332840 CRCT1Q9UGL9 99 aa5.26□□□□□ -1.57
SYN3-201ENST00000332840 CYSTM1Q9H1C7 97 aa5.25□□□□□ -1.57
SYN3-201ENST00000332840 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
SYN3-201ENST00000332840 C1orf64Q8NEQ6 169 aa5.24□□□□□ -1.57
SYN3-201ENST00000332840 C20orf166-AS1Q96NR2 134 aa5.24□□□□□ -1.57
SYN3-201ENST00000332840 A8MUU9 505 aa5.23□□□□□ -1.57
SYN3-201ENST00000332840 H7BZZ5 65 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms