RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 C8orf17Q9NRJ1 99 aa10.68□□□□□ -0.7
LYSMD4-201ENST00000332728 RETNLBQ9BQ08 111 aa10.67□□□□□ -0.7
LYSMD4-201ENST00000332728 C1orf64Q8NEQ6 169 aa10.66□□□□□ -0.7
LYSMD4-201ENST00000332728 KMT2CQ8NEZ4 4911 aaKnown RBP10.64□□□□□ -0.71
LYSMD4-201ENST00000332728 DYNC1H1Q14204 4646 aaKnown RBP10.64□□□□□ -0.71
LYSMD4-201ENST00000332728 A0A1B0GVX0 72 aa10.64□□□□□ -0.71
LYSMD4-201ENST00000332728 KRTAP13-2Q52LG2 175 aa10.63□□□□□ -0.71
LYSMD4-201ENST00000332728 TRAV22A0A0B4J277 110 aa10.62□□□□□ -0.71
LYSMD4-201ENST00000332728 SMIM26A0A096LP01 95 aa10.57□□□□□ -0.72
LYSMD4-201ENST00000332728 ATP5EP56381 51 aaPredicted RBP10.56□□□□□ -0.72
LYSMD4-201ENST00000332728 Q6ZSA8 131 aa10.56□□□□□ -0.72
LYSMD4-201ENST00000332728 MRPL34Q9BQ48 92 aaKnown RBP10.53□□□□□ -0.72
LYSMD4-201ENST00000332728 PLA2G1BP04054 148 aaKnown RBP10.53□□□□□ -0.72
LYSMD4-201ENST00000332728 Q5W150 140 aa10.51□□□□□ -0.73
LYSMD4-201ENST00000332728 KRTAP1-4P0C5Y4 121 aa10.48□□□□□ -0.73
LYSMD4-201ENST00000332728 CD164Q04900 197 aa10.48□□□□□ -0.73
LYSMD4-201ENST00000332728 PSPHP1O15172 72 aa10.48□□□□□ -0.73
LYSMD4-201ENST00000332728 LINC00336Q6ZUF6 198 aa10.47□□□□□ -0.73
LYSMD4-201ENST00000332728 SSBP3-AS1Q7Z2R9 100 aa10.47□□□□□ -0.73
LYSMD4-201ENST00000332728 PRR26Q8N8Z3 221 aa10.46□□□□□ -0.74
LYSMD4-201ENST00000332728 ASB16-AS1Q495Z4 193 aa10.45□□□□□ -0.74
LYSMD4-201ENST00000332728 C1orf195Q5TG92 126 aa10.45□□□□□ -0.74
LYSMD4-201ENST00000332728 RYR2Q92736 4967 aa10.43□□□□□ -0.74
LYSMD4-201ENST00000332728 TYMSOSQ8TAI1 123 aa10.43□□□□□ -0.74
LYSMD4-201ENST00000332728 APOBP04114 4563 aaKnown RBP10.42□□□□□ -0.74
LYSMD4-201ENST00000332728 LINC00313P59037 77 aa10.39□□□□□ -0.75
LYSMD4-201ENST00000332728 TP53AIP1Q9HCN2 124 aa10.39□□□□□ -0.75
LYSMD4-201ENST00000332728 BRK1Q8WUW1 75 aa10.38□□□□□ -0.75
LYSMD4-201ENST00000332728 C4orf48Q5BLP8 95 aa10.38□□□□□ -0.75
LYSMD4-201ENST00000332728 Q8N9P0 234 aaPredicted RBP10.38□□□□□ -0.75
LYSMD4-201ENST00000332728 CYP4F30PQ9H0H9 118 aa10.37□□□□□ -0.75
LYSMD4-201ENST00000332728 H3BPC8 53 aa10.34□□□□□ -0.75
LYSMD4-201ENST00000332728 KRTAP21-3Q3LHN1 58 aa10.34□□□□□ -0.75
LYSMD4-201ENST00000332728 FLG2Q5D862 2391 aaPredicted RBP10.33□□□□□ -0.76
LYSMD4-201ENST00000332728 COA5Q86WW8 74 aa10.33□□□□□ -0.76
LYSMD4-201ENST00000332728 LRP1Q07954 4544 aaKnown RBP10.31□□□□□ -0.76
LYSMD4-201ENST00000332728 A8MUN3 132 aa10.31□□□□□ -0.76
LYSMD4-201ENST00000332728 IGLV7-46A0A075B6I9 117 aa10.29□□□□□ -0.76
LYSMD4-201ENST00000332728 RYR3Q15413 4870 aa10.28□□□□□ -0.76
LYSMD4-201ENST00000332728 SPANXA2-OT1Q8N9U9 137 aa10.28□□□□□ -0.76
LYSMD4-201ENST00000332728 IGKV2D-30A0A075B6S6 120 aa10.26□□□□□ -0.77
LYSMD4-201ENST00000332728 IGKV2-30P06310 120 aa10.26□□□□□ -0.77
LYSMD4-201ENST00000332728 C9orf92A6NGG3 77 aa10.25□□□□□ -0.77
LYSMD4-201ENST00000332728 SPAG11AQ6PDA7 123 aa10.25□□□□□ -0.77
LYSMD4-201ENST00000332728 A8MU10 97 aa10.24□□□□□ -0.77
LYSMD4-201ENST00000332728 LINC00304Q8N9R0 145 aa10.23□□□□□ -0.77
LYSMD4-201ENST00000332728 DMBT1Q9UGM3 2413 aaPredicted RBP10.22□□□□□ -0.77
LYSMD4-201ENST00000332728 KRTAP13-3Q3SY46 172 aa10.22□□□□□ -0.77
LYSMD4-201ENST00000332728 HRES1P13985 223 aa10.22□□□□□ -0.77
LYSMD4-201ENST00000332728 LIMD2Q9BT23 127 aa10.22□□□□□ -0.77
LYSMD4-201ENST00000332728 C8orf87E5RJ46 101 aa10.21□□□□□ -0.77
LYSMD4-201ENST00000332728 A0A1B0GVY2 172 aa10.21□□□□□ -0.78
LYSMD4-201ENST00000332728 PRR15LQ9BU68 103 aa10.2□□□□□ -0.78
LYSMD4-201ENST00000332728 KRTAP16-1A8MUX0 517 aa10.19□□□□□ -0.78
LYSMD4-201ENST00000332728 Q1T7F1 81 aa10.18□□□□□ -0.78
LYSMD4-201ENST00000332728 LOC101927531A0A1B0GV80 90 aa10.18□□□□□ -0.78
LYSMD4-201ENST00000332728 PKHD1L1Q86WI1 4243 aa10.17□□□□□ -0.78
LYSMD4-201ENST00000332728 MYCBP2O75592 4640 aa10.16□□□□□ -0.78
LYSMD4-201ENST00000332728 SPINK1P00995 79 aa10.15□□□□□ -0.78
LYSMD4-201ENST00000332728 FAM229AH3BQW9 127 aa10.13□□□□□ -0.79
LYSMD4-201ENST00000332728 CHKB-CPT1BH3BT56 60 aa10.11□□□□□ -0.79
LYSMD4-201ENST00000332728 Q5VV11 94 aa10.11□□□□□ -0.79
LYSMD4-201ENST00000332728 KRTAP10-4P60372 401 aaPredicted RBP10.09□□□□□ -0.79
LYSMD4-201ENST00000332728 PRO0628Q9UI54 55 aa10.09□□□□□ -0.79
LYSMD4-201ENST00000332728 KIAA1109Q2LD37 5005 aa10.08□□□□□ -0.8
LYSMD4-201ENST00000332728 HSPG2P98160 4391 aa10.08□□□□□ -0.8
LYSMD4-201ENST00000332728 Q8N1X5 172 aa10.04□□□□□ -0.8
LYSMD4-201ENST00000332728 A6NED7 52 aa9.98□□□□□ -0.81
LYSMD4-201ENST00000332728 C7orf65Q6ZTY9 151 aa9.98□□□□□ -0.81
LYSMD4-201ENST00000332728 ACYP2P14621 99 aa9.97□□□□□ -0.81
LYSMD4-201ENST00000332728 KRTAP17-1Q9BYP8 105 aa9.97□□□□□ -0.81
LYSMD4-201ENST00000332728 V9GYY9 64 aa9.97□□□□□ -0.81
LYSMD4-201ENST00000332728 EPPK1P58107 5090 aaKnown RBP9.95□□□□□ -0.82
LYSMD4-201ENST00000332728 SPTSSBQ8NFR3 76 aa9.94□□□□□ -0.82
LYSMD4-201ENST00000332728 TNXBP22105 4242 aa9.94□□□□□ -0.82
LYSMD4-201ENST00000332728 RYR1P21817 5038 aa9.93□□□□□ -0.82
LYSMD4-201ENST00000332728 Q5VSD8 79 aa9.92□□□□□ -0.82
LYSMD4-201ENST00000332728 FAT3Q8TDW7 4589 aa9.92□□□□□ -0.82
LYSMD4-201ENST00000332728 DMAC1Q96GE9 116 aa9.92□□□□□ -0.82
LYSMD4-201ENST00000332728 SPINK7P58062 85 aa9.92□□□□□ -0.82
LYSMD4-201ENST00000332728 LCA10Q71F78 164 aa9.87□□□□□ -0.83
LYSMD4-201ENST00000332728 LINC01558Q9Y6Z2 57 aa9.87□□□□□ -0.83
LYSMD4-201ENST00000332728 Q75L30 129 aa9.82□□□□□ -0.84
LYSMD4-201ENST00000332728 RPS29P62273 56 aaKnown RBP9.78□□□□□ -0.84
LYSMD4-201ENST00000332728 A0A1B0GU69 56 aa9.74□□□□□ -0.85
LYSMD4-201ENST00000332728 A8MUU9 505 aa9.74□□□□□ -0.85
LYSMD4-201ENST00000332728 PMAIP1Q13794 54 aa9.74□□□□□ -0.85
LYSMD4-201ENST00000332728 C20orf166-AS1Q96NR2 134 aa9.72□□□□□ -0.85
LYSMD4-201ENST00000332728 LPAP08519 4548 aa9.71□□□□□ -0.85
LYSMD4-201ENST00000332728 KRTAP10-8P60410 259 aa9.67□□□□□ -0.86
LYSMD4-201ENST00000332728 KRTAP3-1Q9BYR8 98 aa9.67□□□□□ -0.86
LYSMD4-201ENST00000332728 ABCA13Q86UQ4 5058 aa9.67□□□□□ -0.86
LYSMD4-201ENST00000332728 LRP2P98164 4655 aa9.65□□□□□ -0.87
LYSMD4-201ENST00000332728 CDC42SE1Q9NRR8 79 aa9.63□□□□□ -0.87
LYSMD4-201ENST00000332728 ATP11AUNQ6ZP68 121 aa9.58□□□□□ -0.88
LYSMD4-201ENST00000332728 KRTAP4-5Q9BYR2 181 aa9.57□□□□□ -0.88
LYSMD4-201ENST00000332728 MT1HL1P0DM35 61 aa9.52□□□□□ -0.88
LYSMD4-201ENST00000332728 XP32Q5T750 250 aa9.52□□□□□ -0.89
LYSMD4-201ENST00000332728 MIR22HGQ0VDD5 57 aa9.46□□□□□ -0.89
LYSMD4-201ENST00000332728 SEC61GP60059 68 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms