RNA–Protein interactions for RNA: ENST00000332687.10

RLIM-201, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLIM, Length 8,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-201ENST00000332687 MGAQ8IWI9 3026 aa2.87□□□□□ -1.95
RLIM-201ENST00000332687 KALRNO60229 2985 aa2.86□□□□□ -1.95
RLIM-201ENST00000332687 PRO2289Q9P1D8 64 aa2.86□□□□□ -1.95
RLIM-201ENST00000332687 C20orf166-AS1Q96NR2 134 aa2.85□□□□□ -1.95
RLIM-201ENST00000332687 A8MUU9 505 aa2.85□□□□□ -1.95
RLIM-201ENST00000332687 TNP1P09430 55 aa2.84□□□□□ -1.96
RLIM-201ENST00000332687 PP632Q6XCG6 107 aa2.84□□□□□ -1.96
RLIM-201ENST00000332687 IGSF10Q6WRI0 2623 aa2.83□□□□□ -1.96
RLIM-201ENST00000332687 TPRXLQ17RH7 258 aa2.83□□□□□ -1.96
RLIM-201ENST00000332687 A0A087X002 238 aa2.83□□□□□ -1.96
RLIM-201ENST00000332687 CHD7Q9P2D1 2997 aa2.82□□□□□ -1.96
RLIM-201ENST00000332687 KRTAP29-1A8MX34 341 aaPredicted RBP2.81□□□□□ -1.96
RLIM-201ENST00000332687 KRTAP13-1Q8IUC0 172 aa2.8□□□□□ -1.96
RLIM-201ENST00000332687 DMXL1Q9Y485 3027 aa2.79□□□□□ -1.96
RLIM-201ENST00000332687 Q8NDZ9 215 aa2.78□□□□□ -1.96
RLIM-201ENST00000332687 ZZEF1O43149 2961 aa2.78□□□□□ -1.96
RLIM-201ENST00000332687 SPATA8Q6RVD6 105 aa2.77□□□□□ -1.97
RLIM-201ENST00000332687 Q5VV11 94 aa2.77□□□□□ -1.97
RLIM-201ENST00000332687 ASH1LQ9NR48 2969 aaKnown RBP2.77□□□□□ -1.97
RLIM-201ENST00000332687 DSPP15924 2871 aaKnown RBP2.76□□□□□ -1.97
RLIM-201ENST00000332687 TRANK1O15050 2925 aa2.76□□□□□ -1.97
RLIM-201ENST00000332687 KRTAP13-2Q52LG2 175 aa2.74□□□□□ -1.97
RLIM-201ENST00000332687 NBEAQ8NFP9 2946 aa2.74□□□□□ -1.97
RLIM-201ENST00000332687 UBR5O95071 2799 aaPredicted RBP2.72□□□□□ -1.97
RLIM-201ENST00000332687 KRTAP25-1Q3LHN0 102 aa2.7□□□□□ -1.98
RLIM-201ENST00000332687 XP32Q5T750 250 aa2.7□□□□□ -1.98
RLIM-201ENST00000332687 CELSR1Q9NYQ6 3014 aa2.7□□□□□ -1.98
RLIM-201ENST00000332687 APCP25054 2843 aa2.7□□□□□ -1.98
RLIM-201ENST00000332687 TACC2O95359 2948 aa2.69□□□□□ -1.98
RLIM-201ENST00000332687 CRYBG3Q68DQ2 2970 aa2.68□□□□□ -1.98
RLIM-201ENST00000332687 HIVEP1P15822 2718 aa2.68□□□□□ -1.98
RLIM-201ENST00000332687 CHD9Q3L8U1 2897 aa2.68□□□□□ -1.98
RLIM-201ENST00000332687 KRTAP10-8P60410 259 aa2.66□□□□□ -1.98
RLIM-201ENST00000332687 KRTAP10-10P60014 251 aa2.66□□□□□ -1.98
RLIM-201ENST00000332687 ITPR1Q14643 2758 aa2.66□□□□□ -1.98
RLIM-201ENST00000332687 NIPBLQ6KC79 2804 aaeCLIP2.65□□□□□ -1.99
RLIM-201ENST00000332687 FLNCQ14315 2725 aa2.64□□□□□ -1.99
RLIM-201ENST00000332687 TENM4Q6N022 2769 aa2.64□□□□□ -1.99
RLIM-201ENST00000332687 KRTAP1-4P0C5Y4 121 aa2.64□□□□□ -1.99
RLIM-201ENST00000332687 UTP20O75691 2785 aaKnown RBP2.64□□□□□ -1.99
RLIM-201ENST00000332687 KRTAP13-3Q3SY46 172 aa2.64□□□□□ -1.99
RLIM-201ENST00000332687 KRTAP11-1Q8IUC1 163 aa2.64□□□□□ -1.99
RLIM-201ENST00000332687 KRTAP7-1Q8IUC3 87 aa2.63□□□□□ -1.99
RLIM-201ENST00000332687 NBEAL2Q6ZNJ1 2754 aa2.63□□□□□ -1.99
RLIM-201ENST00000332687 TENM1Q9UKZ4 2725 aa2.62□□□□□ -1.99
RLIM-201ENST00000332687 KRTAP16-1A8MUX0 517 aa2.61□□□□□ -1.99
RLIM-201ENST00000332687 A0A1B0GVY2 172 aa2.6□□□□□ -1.99
RLIM-201ENST00000332687 H0YAA0 97 aa2.6□□□□□ -1.99
RLIM-201ENST00000332687 PRAC1Q96KF2 57 aa2.59□□□□□ -1.99
RLIM-201ENST00000332687 LRBAP50851 2863 aa2.59□□□□□ -1.99
RLIM-201ENST00000332687 P0C880 135 aa2.57□□□□□ -2
RLIM-201ENST00000332687 VPS13CQ709C8 3753 aa2.57□□□□□ -2
RLIM-201ENST00000332687 C10orf95Q9H7T3 257 aa2.56□□□□□ -2
RLIM-201ENST00000332687 TENM3Q9P273 2699 aa2.55□□□□□ -2
RLIM-201ENST00000332687 NBPF19A0A087WUL8 3843 aa2.55□□□□□ -2
RLIM-201ENST00000332687 A6NN06 94 aa2.55□□□□□ -2
RLIM-201ENST00000332687 DCHS2Q6V1P9 2916 aa2.54□□□□□ -2
RLIM-201ENST00000332687 A8MU10 97 aa2.54□□□□□ -2
RLIM-201ENST00000332687 CYSTM1Q9H1C7 97 aa2.53□□□□□ -2
RLIM-201ENST00000332687 H3BS24 57 aa2.52□□□□□ -2.01
RLIM-201ENST00000332687 NF1P21359 2839 aa2.48□□□□□ -2.01
RLIM-201ENST00000332687 CSMD3Q7Z407 3707 aa2.48□□□□□ -2.01
RLIM-201ENST00000332687 KRTAP13-4Q3LI77 160 aa2.46□□□□□ -2.02
RLIM-201ENST00000332687 CELSR2Q9HCU4 2923 aa2.44□□□□□ -2.02
RLIM-201ENST00000332687 NDUFAF8A1L188 74 aa2.44□□□□□ -2.02
RLIM-201ENST00000332687 MXRA5Q9NR99 2828 aa2.42□□□□□ -2.02
RLIM-201ENST00000332687 DNHD1Q96M86 4753 aa2.42□□□□□ -2.02
RLIM-201ENST00000332687 TENM2Q9NT68 2774 aa2.4□□□□□ -2.02
RLIM-201ENST00000332687 PDZD2O15018 2839 aa2.4□□□□□ -2.03
RLIM-201ENST00000332687 TGP01266 2768 aa2.4□□□□□ -2.03
RLIM-201ENST00000332687 KRTAP23-1A1A580 65 aa2.37□□□□□ -2.03
RLIM-201ENST00000332687 KRTAP15-1Q3LI76 137 aa2.34□□□□□ -2.03
RLIM-201ENST00000332687 ZANQ9Y493 2812 aa2.34□□□□□ -2.03
RLIM-201ENST00000332687 AKAP9Q99996 3911 aa2.32□□□□□ -2.04
RLIM-201ENST00000332687 KRTAP12-2P59991 146 aa2.32□□□□□ -2.04
RLIM-201ENST00000332687 HRNRQ86YZ3 2850 aaPredicted RBP2.31□□□□□ -2.04
RLIM-201ENST00000332687 KRTAP12-1P59990 96 aa2.31□□□□□ -2.04
RLIM-201ENST00000332687 PKD1L1Q8TDX9 2849 aa2.31□□□□□ -2.04
RLIM-201ENST00000332687 FBN3Q75N90 2809 aa2.29□□□□□ -2.04
RLIM-201ENST00000332687 INE1O15225 51 aa2.29□□□□□ -2.04
RLIM-201ENST00000332687 MT1HL1P0DM35 61 aa2.29□□□□□ -2.04
RLIM-201ENST00000332687 KRTAP10-12P60413 245 aa2.29□□□□□ -2.04
RLIM-201ENST00000332687 KRTAP19-4Q3LI73 84 aa2.28□□□□□ -2.04
RLIM-201ENST00000332687 FBN2P35556 2912 aa2.26□□□□□ -2.05
RLIM-201ENST00000332687 ALMS1Q8TCU4 4167 aa2.25□□□□□ -2.05
RLIM-201ENST00000332687 VWFP04275 2813 aa2.25□□□□□ -2.05
RLIM-201ENST00000332687 ZNF469Q96JG9 3925 aaPredicted RBP2.23□□□□□ -2.05
RLIM-201ENST00000332687 RYR2Q92736 4967 aa2.23□□□□□ -2.05
RLIM-201ENST00000332687 RYR1P21817 5038 aa2.21□□□□□ -2.06
RLIM-201ENST00000332687 BIRC6Q9NR09 4857 aa2.21□□□□□ -2.06
RLIM-201ENST00000332687 KRTAP3-1Q9BYR8 98 aa2.2□□□□□ -2.06
RLIM-201ENST00000332687 COL7A1Q02388 2944 aa2.19□□□□□ -2.06
RLIM-201ENST00000332687 ANK3Q12955 4377 aaKnown RBP2.19□□□□□ -2.06
RLIM-201ENST00000332687 HUWE1Q7Z6Z7 4374 aaKnown RBP2.19□□□□□ -2.06
RLIM-201ENST00000332687 KRTAP10-6P60371 365 aaPredicted RBP2.18□□□□□ -2.06
RLIM-201ENST00000332687 BSNQ9UPA5 3926 aa2.18□□□□□ -2.06
RLIM-201ENST00000332687 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
RLIM-201ENST00000332687 KRTAP10-4P60372 401 aaPredicted RBP2.17□□□□□ -2.06
RLIM-201ENST00000332687 KRTAP8-1Q8IUC2 63 aa2.17□□□□□ -2.06
RLIM-201ENST00000332687 MEGF8Q7Z7M0 2845 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms