RNA–Protein interactions for RNA: ENST00000328024.10

RAB11B-201, Transcript of RAB11B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11B, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-201ENST00000328024 LPAP08519 4548 aa11.51□□□□□ -0.57
RAB11B-201ENST00000328024 SPINK1P00995 79 aa11.51□□□□□ -0.57
RAB11B-201ENST00000328024 TMEM258P61165 79 aa11.51□□□□□ -0.57
RAB11B-201ENST00000328024 HRCT1Q6UXD1 115 aa11.48□□□□□ -0.57
RAB11B-201ENST00000328024 PRR4Q16378 134 aa11.47□□□□□ -0.57
RAB11B-201ENST00000328024 KLKP1Q107X0 134 aa11.46□□□□□ -0.58
RAB11B-201ENST00000328024 RPS29P62273 56 aaKnown RBP11.44□□□□□ -0.58
RAB11B-201ENST00000328024 C20orf197Q8N268 126 aa11.44□□□□□ -0.58
RAB11B-201ENST00000328024 Q8N9L7 120 aa11.44□□□□□ -0.58
RAB11B-201ENST00000328024 DSCR10P59022 87 aa11.44□□□□□ -0.58
RAB11B-201ENST00000328024 UBR4Q5T4S7 5183 aa11.42□□□□□ -0.58
RAB11B-201ENST00000328024 NDUFC1O43677 76 aa11.42□□□□□ -0.58
RAB11B-201ENST00000328024 A0A087WSZ3 146 aa11.41□□□□□ -0.58
RAB11B-201ENST00000328024 RPS28P62857 69 aaKnown RBP11.41□□□□□ -0.58
RAB11B-201ENST00000328024 OCR1Q9BZK8 76 aa11.41□□□□□ -0.58
RAB11B-201ENST00000328024 CD164Q04900 197 aa11.4□□□□□ -0.58
RAB11B-201ENST00000328024 CYSTM1Q9H1C7 97 aa11.38□□□□□ -0.59
RAB11B-201ENST00000328024 J3KT08 172 aa11.35□□□□□ -0.59
RAB11B-201ENST00000328024 K7EQZ3 153 aa11.35□□□□□ -0.59
RAB11B-201ENST00000328024 IGLV7-46A0A075B6I9 117 aa11.33□□□□□ -0.59
RAB11B-201ENST00000328024 HCG22E2RYF7 251 aa11.33□□□□□ -0.59
RAB11B-201ENST00000328024 TMEM254Q8TBM7 123 aa11.32□□□□□ -0.6
RAB11B-201ENST00000328024 LINC00472Q9H8W2 130 aa11.32□□□□□ -0.6
RAB11B-201ENST00000328024 H7BZZ5 65 aa11.31□□□□□ -0.6
RAB11B-201ENST00000328024 LIMD2Q9BT23 127 aa11.31□□□□□ -0.6
RAB11B-201ENST00000328024 Q5XG85 94 aa11.3□□□□□ -0.6
RAB11B-201ENST00000328024 FP248Q71RG6 208 aaPredicted RBP11.3□□□□□ -0.6
RAB11B-201ENST00000328024 A8MWP4 228 aa11.28□□□□□ -0.6
RAB11B-201ENST00000328024 ATP5EP56381 51 aaPredicted RBP11.26□□□□□ -0.61
RAB11B-201ENST00000328024 PRR15Q8IV56 129 aa11.26□□□□□ -0.61
RAB11B-201ENST00000328024 A0A0U1RQV1 116 aa11.26□□□□□ -0.61
RAB11B-201ENST00000328024 C5orf47Q569G3 176 aa11.26□□□□□ -0.61
RAB11B-201ENST00000328024 FAM236DA0A1B0GTK5 79 aa11.25□□□□□ -0.61
RAB11B-201ENST00000328024 FAM236CP0DP71 79 aa11.25□□□□□ -0.61
RAB11B-201ENST00000328024 SNURFQ9Y675 71 aa11.25□□□□□ -0.61
RAB11B-201ENST00000328024 TPRXLQ17RH7 258 aa11.24□□□□□ -0.61
RAB11B-201ENST00000328024 C1orf195Q5TG92 126 aa11.23□□□□□ -0.61
RAB11B-201ENST00000328024 NDUFB1O75438 58 aa11.23□□□□□ -0.61
RAB11B-201ENST00000328024 DEFB116Q30KQ4 102 aa11.21□□□□□ -0.61
RAB11B-201ENST00000328024 KRTAP13-3Q3SY46 172 aa11.21□□□□□ -0.61
RAB11B-201ENST00000328024 ASB16-AS1Q495Z4 193 aa11.17□□□□□ -0.62
RAB11B-201ENST00000328024 RNF213Q63HN8 5207 aa11.17□□□□□ -0.62
RAB11B-201ENST00000328024 CASC2Q6XLA1 102 aa11.16□□□□□ -0.62
RAB11B-201ENST00000328024 SERP1Q9Y6X1 66 aa11.15□□□□□ -0.62
RAB11B-201ENST00000328024 WFDC13Q8IUB5 93 aa11.13□□□□□ -0.63
RAB11B-201ENST00000328024 H3BPC8 53 aa11.13□□□□□ -0.63
RAB11B-201ENST00000328024 Q96NJ1 140 aa11.13□□□□□ -0.63
RAB11B-201ENST00000328024 MP68P56378 58 aa11.11□□□□□ -0.63
RAB11B-201ENST00000328024 ZCCHC13Q8WW36 166 aaKnown RBP11.11□□□□□ -0.63
RAB11B-201ENST00000328024 MUC17Q685J3 4493 aa11.08□□□□□ -0.64
RAB11B-201ENST00000328024 MMP24-AS1A0A0U1RRL7 71 aa11.07□□□□□ -0.64
RAB11B-201ENST00000328024 C9orf92A6NGG3 77 aa11.05□□□□□ -0.64
RAB11B-201ENST00000328024 TP53AIP1Q9HCN2 124 aa11.05□□□□□ -0.64
RAB11B-201ENST00000328024 hDV103S1A0JD37 113 aa11.05□□□□□ -0.64
RAB11B-201ENST00000328024 A0A1B0GVX0 72 aa11.03□□□□□ -0.64
RAB11B-201ENST00000328024 XP32Q5T750 250 aa11.03□□□□□ -0.64
RAB11B-201ENST00000328024 C8orf17Q9NRJ1 99 aa11.01□□□□□ -0.65
RAB11B-201ENST00000328024 MUC2Q02817 5179 aa10.99□□□□□ -0.65
RAB11B-201ENST00000328024 H0Y9P7 68 aa10.97□□□□□ -0.65
RAB11B-201ENST00000328024 SMIM26A0A096LP01 95 aa10.95□□□□□ -0.66
RAB11B-201ENST00000328024 TRAV22A0A0B4J277 110 aa10.94□□□□□ -0.66
RAB11B-201ENST00000328024 LINC00208Q96KT6 92 aa10.94□□□□□ -0.66
RAB11B-201ENST00000328024 IGHV6-1A0A0B4J1U7 121 aa10.93□□□□□ -0.66
RAB11B-201ENST00000328024 MRPL34Q9BQ48 92 aaKnown RBP10.92□□□□□ -0.66
RAB11B-201ENST00000328024 CYP4F30PQ9H0H9 118 aa10.92□□□□□ -0.66
RAB11B-201ENST00000328024 C8orf87E5RJ46 101 aa10.91□□□□□ -0.66
RAB11B-201ENST00000328024 SPANXA2-OT1Q8N9U9 137 aa10.91□□□□□ -0.66
RAB11B-201ENST00000328024 C1orf64Q8NEQ6 169 aa10.88□□□□□ -0.67
RAB11B-201ENST00000328024 SEC61BP60468 96 aaKnown RBP10.85□□□□□ -0.67
RAB11B-201ENST00000328024 KRTAP4-1Q9BYQ7 146 aa10.83□□□□□ -0.68
RAB11B-201ENST00000328024 RPL37P61927 97 aaKnown RBP10.81□□□□□ -0.68
RAB11B-201ENST00000328024 NOTCH2NLQ7Z3S9 236 aa10.81□□□□□ -0.68
RAB11B-201ENST00000328024 PCOTHQ58A44 107 aa10.8□□□□□ -0.68
RAB11B-201ENST00000328024 NDUFS5O43920 106 aa10.8□□□□□ -0.68
RAB11B-201ENST00000328024 LINC00313P59037 77 aa10.75□□□□□ -0.69
RAB11B-201ENST00000328024 KRTAP16-1A8MUX0 517 aa10.74□□□□□ -0.69
RAB11B-201ENST00000328024 Q75L30 129 aa10.72□□□□□ -0.69
RAB11B-201ENST00000328024 LOC101927531A0A1B0GV80 90 aa10.72□□□□□ -0.69
RAB11B-201ENST00000328024 C20orf166-AS1Q96NR2 134 aa10.72□□□□□ -0.69
RAB11B-201ENST00000328024 A8MUU9 505 aa10.7□□□□□ -0.7
RAB11B-201ENST00000328024 C4orf26Q17RF5 130 aa10.7□□□□□ -0.7
RAB11B-201ENST00000328024 FAT4Q6V0I7 4981 aa10.7□□□□□ -0.7
RAB11B-201ENST00000328024 Q8N9P0 234 aaPredicted RBP10.68□□□□□ -0.7
RAB11B-201ENST00000328024 SVIPQ8NHG7 77 aa10.65□□□□□ -0.71
RAB11B-201ENST00000328024 Q1T7F1 81 aa10.62□□□□□ -0.71
RAB11B-201ENST00000328024 ATP11AUNQ6ZP68 121 aa10.62□□□□□ -0.71
RAB11B-201ENST00000328024 V9GYY9 64 aa10.62□□□□□ -0.71
RAB11B-201ENST00000328024 Q5W150 140 aa10.58□□□□□ -0.72
RAB11B-201ENST00000328024 MPLKIPQ8TAP9 179 aa10.54□□□□□ -0.72
RAB11B-201ENST00000328024 KRTAP19-2Q3LHN2 52 aa10.51□□□□□ -0.73
RAB11B-201ENST00000328024 COA5Q86WW8 74 aa10.49□□□□□ -0.73
RAB11B-201ENST00000328024 IGKV2-30P06310 120 aa10.47□□□□□ -0.73
RAB11B-201ENST00000328024 LCE2CQ5TA81 110 aa10.46□□□□□ -0.74
RAB11B-201ENST00000328024 LCE2AQ5TA79 106 aaPredicted RBP10.42□□□□□ -0.74
RAB11B-201ENST00000328024 ACYP2P14621 99 aa10.41□□□□□ -0.74
RAB11B-201ENST00000328024 HRES1P13985 223 aa10.38□□□□□ -0.75
RAB11B-201ENST00000328024 DMAC1Q96GE9 116 aa10.36□□□□□ -0.75
RAB11B-201ENST00000328024 PRO0628Q9UI54 55 aa10.35□□□□□ -0.75
RAB11B-201ENST00000328024 LINC01558Q9Y6Z2 57 aa10.29□□□□□ -0.76
RAB11B-201ENST00000328024 PSPHP1O15172 72 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms