RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 C8orf87E5RJ46 101 aa8.84□□□□□ -0.99
PTPMT1-201ENST00000326656 K7ERJ3 54 aa8.84□□□□□ -0.99
PTPMT1-201ENST00000326656 C21orf62-AS1Q17RA5 79 aa8.84□□□□□ -0.99
PTPMT1-201ENST00000326656 RBM3P98179 157 aaKnown RBP8.82□□□□□ -1
PTPMT1-201ENST00000326656 A0A1B0GVX0 72 aa8.81□□□□□ -1
PTPMT1-201ENST00000326656 MT2AP02795 61 aa8.81□□□□□ -1
PTPMT1-201ENST00000326656 DSCR8Q96T75 97 aa8.8□□□□□ -1
PTPMT1-201ENST00000326656 J3KT08 172 aa8.79□□□□□ -1
PTPMT1-201ENST00000326656 MTURNQ8N3F0 131 aa8.79□□□□□ -1
PTPMT1-201ENST00000326656 UQCR10Q9UDW1 63 aa8.78□□□□□ -1
PTPMT1-201ENST00000326656 SCGB1C2P0DMR2 95 aa8.77□□□□□ -1.01
PTPMT1-201ENST00000326656 VPS25Q9BRG1 176 aa8.77□□□□□ -1.01
PTPMT1-201ENST00000326656 FCGBPQ9Y6R7 5405 aaPredicted RBP8.75□□□□□ -1.01
PTPMT1-201ENST00000326656 C9JAW5 83 aa8.74□□□□□ -1.01
PTPMT1-201ENST00000326656 ZCCHC13Q8WW36 166 aaKnown RBP8.74□□□□□ -1.01
PTPMT1-201ENST00000326656 MT1FP04733 61 aa8.73□□□□□ -1.01
PTPMT1-201ENST00000326656 BAALC-AS2P0C853 105 aa8.72□□□□□ -1.01
PTPMT1-201ENST00000326656 KRTAP10-10P60014 251 aa8.72□□□□□ -1.01
PTPMT1-201ENST00000326656 NDUFB1O75438 58 aa8.71□□□□□ -1.02
PTPMT1-201ENST00000326656 Q6ZQT0 140 aa8.71□□□□□ -1.02
PTPMT1-201ENST00000326656 KRTAP9-3Q9BYQ3 159 aa8.71□□□□□ -1.02
PTPMT1-201ENST00000326656 A0A1B0GW54 56 aa8.7□□□□□ -1.02
PTPMT1-201ENST00000326656 SPINK7P58062 85 aa8.7□□□□□ -1.02
PTPMT1-201ENST00000326656 Q8N9P0 234 aaPredicted RBP8.69□□□□□ -1.02
PTPMT1-201ENST00000326656 LOC105371267A0A1B0GV96 52 aa8.67□□□□□ -1.02
PTPMT1-201ENST00000326656 JMJD7-PLA2G4BH0Y9G9 81 aa8.65□□□□□ -1.02
PTPMT1-201ENST00000326656 KRTAP19-1Q8IUB9 90 aa8.65□□□□□ -1.02
PTPMT1-201ENST00000326656 A8MWP4 228 aa8.63□□□□□ -1.03
PTPMT1-201ENST00000326656 PDE6GP18545 87 aa8.63□□□□□ -1.03
PTPMT1-201ENST00000326656 LOC110117498A0A087WWA1 95 aa8.62□□□□□ -1.03
PTPMT1-201ENST00000326656 SMIM6P0DI80 62 aa8.62□□□□□ -1.03
PTPMT1-201ENST00000326656 ATXN8Q156A1 80 aa8.6□□□□□ -1.03
PTPMT1-201ENST00000326656 LYRM7Q5U5X0 104 aa8.6□□□□□ -1.03
PTPMT1-201ENST00000326656 C8orf17Q9NRJ1 99 aa8.6□□□□□ -1.03
PTPMT1-201ENST00000326656 SYNE2Q8WXH0 6885 aaKnown RBP8.58□□□□□ -1.04
PTPMT1-201ENST00000326656 IGKV3D-7A0A0C4DH55 119 aa8.56□□□□□ -1.04
PTPMT1-201ENST00000326656 M0R143 59 aa8.56□□□□□ -1.04
PTPMT1-201ENST00000326656 LINC00846Q9NV44 126 aa8.56□□□□□ -1.04
PTPMT1-201ENST00000326656 MACF1Q9UPN3 7388 aaKnown RBP8.55□□□□□ -1.04
PTPMT1-201ENST00000326656 Q6ZVQ6 151 aa8.55□□□□□ -1.04
PTPMT1-201ENST00000326656 WFDC13Q8IUB5 93 aa8.55□□□□□ -1.04
PTPMT1-201ENST00000326656 PRR15Q8IV56 129 aa8.53□□□□□ -1.04
PTPMT1-201ENST00000326656 NREPQ16612 68 aa8.5□□□□□ -1.05
PTPMT1-201ENST00000326656 NAA38Q9BRA0 125 aaKnown RBP8.49□□□□□ -1.05
PTPMT1-201ENST00000326656 C14orf132Q9NPU4 83 aa8.49□□□□□ -1.05
PTPMT1-201ENST00000326656 TMEM254Q8TBM7 123 aa8.47□□□□□ -1.05
PTPMT1-201ENST00000326656 MRPL34Q9BQ48 92 aaKnown RBP8.47□□□□□ -1.05
PTPMT1-201ENST00000326656 KRTAP19-6Q3LI70 58 aa8.46□□□□□ -1.06
PTPMT1-201ENST00000326656 MMP24-AS1A0A0U1RRL7 71 aa8.44□□□□□ -1.06
PTPMT1-201ENST00000326656 TSTD3H0UI37 97 aa8.44□□□□□ -1.06
PTPMT1-201ENST00000326656 H1FX-AS1Q4G0G2 97 aa8.43□□□□□ -1.06
PTPMT1-201ENST00000326656 hDV103S1A0JD37 113 aa8.41□□□□□ -1.06
PTPMT1-201ENST00000326656 K7EQZ3 153 aa8.36□□□□□ -1.07
PTPMT1-201ENST00000326656 NDUFS5O43920 106 aa8.36□□□□□ -1.07
PTPMT1-201ENST00000326656 LOC100996750A0A140TA64 210 aa8.35□□□□□ -1.07
PTPMT1-201ENST00000326656 BATFQ16520 125 aa8.35□□□□□ -1.07
PTPMT1-201ENST00000326656 KRTAP4-6Q9BYQ5 205 aa8.35□□□□□ -1.07
PTPMT1-201ENST00000326656 H3BT86 120 aa8.34□□□□□ -1.07
PTPMT1-201ENST00000326656 BPY2O14599 106 aa8.32□□□□□ -1.08
PTPMT1-201ENST00000326656 C7orf65Q6ZTY9 151 aa8.31□□□□□ -1.08
PTPMT1-201ENST00000326656 IGKV2D-30A0A075B6S6 120 aa8.3□□□□□ -1.08
PTPMT1-201ENST00000326656 IGKV2-30P06310 120 aa8.3□□□□□ -1.08
PTPMT1-201ENST00000326656 Q5W150 140 aa8.28□□□□□ -1.08
PTPMT1-201ENST00000326656 C9orf118A6NHY6 69 aa8.26□□□□□ -1.09
PTPMT1-201ENST00000326656 TAX1BP3O14907 124 aa8.26□□□□□ -1.09
PTPMT1-201ENST00000326656 PCP4L1A6NKN8 68 aa8.24□□□□□ -1.09
PTPMT1-201ENST00000326656 KRTAP6-3Q3LI67 103 aa8.24□□□□□ -1.09
PTPMT1-201ENST00000326656 CASC2Q6XLA1 102 aa8.24□□□□□ -1.09
PTPMT1-201ENST00000326656 A0A1W2PPM0 123 aa8.23□□□□□ -1.09
PTPMT1-201ENST00000326656 CXCL6P80162 114 aa8.21□□□□□ -1.1
PTPMT1-201ENST00000326656 HCG22E2RYF7 251 aa8.2□□□□□ -1.1
PTPMT1-201ENST00000326656 C4orf26Q17RF5 130 aa8.18□□□□□ -1.1
PTPMT1-201ENST00000326656 Q8N9L7 120 aa8.17□□□□□ -1.1
PTPMT1-201ENST00000326656 NEBP20929 6669 aa8.13□□□□□ -1.11
PTPMT1-201ENST00000326656 COL5A1-AS1Q5SY13 56 aa8.1□□□□□ -1.11
PTPMT1-201ENST00000326656 UBL5Q9BZL1 73 aa8.1□□□□□ -1.11
PTPMT1-201ENST00000326656 SPCS1Q9Y6A9 102 aa8.09□□□□□ -1.11
PTPMT1-201ENST00000326656 C5orf47Q569G3 176 aa8.08□□□□□ -1.12
PTPMT1-201ENST00000326656 CSAG1Q6PB30 78 aa8.07□□□□□ -1.12
PTPMT1-201ENST00000326656 FAM236AA0A1B0GUQ0 79 aa8.06□□□□□ -1.12
PTPMT1-201ENST00000326656 FAM236BA0A1B0GV22 79 aa8.06□□□□□ -1.12
PTPMT1-201ENST00000326656 KRTAP3-1Q9BYR8 98 aa8.06□□□□□ -1.12
PTPMT1-201ENST00000326656 S4R3F8 94 aa8.04□□□□□ -1.12
PTPMT1-201ENST00000326656 C1orf64Q8NEQ6 169 aa8.03□□□□□ -1.12
PTPMT1-201ENST00000326656 TP53AIP1Q9HCN2 124 aa8.03□□□□□ -1.12
PTPMT1-201ENST00000326656 PRO0461Q9UI25 63 aa8.01□□□□□ -1.13
PTPMT1-201ENST00000326656 SPRR2GQ9BYE4 73 aa8□□□□□ -1.13
PTPMT1-201ENST00000326656 A6NN06 94 aa7.99□□□□□ -1.13
PTPMT1-201ENST00000326656 Q5VV11 94 aa7.99□□□□□ -1.13
PTPMT1-201ENST00000326656 K7EP34 96 aa7.98□□□□□ -1.13
PTPMT1-201ENST00000326656 KRTAP19-8Q3LI54 63 aa7.98□□□□□ -1.13
PTPMT1-201ENST00000326656 LCA10Q71F78 164 aa7.98□□□□□ -1.13
PTPMT1-201ENST00000326656 MT1BP07438 61 aa7.97□□□□□ -1.13
PTPMT1-201ENST00000326656 MUC12Q9UKN1 5478 aa7.96□□□□□ -1.14
PTPMT1-201ENST00000326656 KRTAP20-1Q3LI63 56 aa7.92□□□□□ -1.14
PTPMT1-201ENST00000326656 KLKP1Q107X0 134 aa7.9□□□□□ -1.14
PTPMT1-201ENST00000326656 GTF2H5Q6ZYL4 71 aa7.88□□□□□ -1.15
PTPMT1-201ENST00000326656 KRTAP10-5P60370 271 aa7.86□□□□□ -1.15
PTPMT1-201ENST00000326656 CRIPTQ9P021 101 aa7.86□□□□□ -1.15
PTPMT1-201ENST00000326656 CYP4F30PQ9H0H9 118 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms