RNA–Protein interactions for RNA: ENST00000324856.11

ARID1A-201, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARID1A, Length 8,577 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-201ENST00000324856 TGP01266 2768 aa10.9□□□□□ -0.66
ARID1A-201ENST00000324856 ATMQ13315 3056 aa10.9□□□□□ -0.66
ARID1A-201ENST00000324856 USP34Q70CQ2 3546 aa10.87□□□□□ -0.67
ARID1A-201ENST00000324856 ADGRG4Q8IZF6 3080 aa10.87□□□□□ -0.67
ARID1A-201ENST00000324856 KRTAP4-16G5E9R7 235 aaPredicted RBP10.86□□□□□ -0.67
ARID1A-201ENST00000324856 BRCA2P51587 3418 aa10.86□□□□□ -0.67
ARID1A-201ENST00000324856 SRRM2Q9UQ35 2752 aaKnown RBP10.85□□□□□ -0.67
ARID1A-201ENST00000324856 DCHS2Q6V1P9 2916 aa10.81□□□□□ -0.68
ARID1A-201ENST00000324856 C20orf166-AS1Q96NR2 134 aa10.81□□□□□ -0.68
ARID1A-201ENST00000324856 ZANQ9Y493 2812 aa10.75□□□□□ -0.69
ARID1A-201ENST00000324856 KRTAP1-3Q8IUG1 177 aa10.71□□□□□ -0.7
ARID1A-201ENST00000324856 CFAP47Q6ZTR5 3102 aa10.7□□□□□ -0.7
ARID1A-201ENST00000324856 VCANP13611 3396 aa10.69□□□□□ -0.7
ARID1A-201ENST00000324856 RPS29P62273 56 aaKnown RBP10.68□□□□□ -0.7
ARID1A-201ENST00000324856 CELSR1Q9NYQ6 3014 aa10.68□□□□□ -0.7
ARID1A-201ENST00000324856 FBN2P35556 2912 aa10.67□□□□□ -0.7
ARID1A-201ENST00000324856 A8MUU9 505 aa10.64□□□□□ -0.71
ARID1A-201ENST00000324856 KRTAP1-1Q07627 177 aa10.63□□□□□ -0.71
ARID1A-201ENST00000324856 KRTAP11-1Q8IUC1 163 aa10.62□□□□□ -0.71
ARID1A-201ENST00000324856 PP632Q6XCG6 107 aa10.61□□□□□ -0.71
ARID1A-201ENST00000324856 CDH23Q9H251 3354 aa10.58□□□□□ -0.72
ARID1A-201ENST00000324856 A8MU10 97 aa10.57□□□□□ -0.72
ARID1A-201ENST00000324856 NOTCH2NLQ7Z3S9 236 aa10.56□□□□□ -0.72
ARID1A-201ENST00000324856 KRTAP1-5Q9BYS1 174 aa10.52□□□□□ -0.72
ARID1A-201ENST00000324856 TNP1P09430 55 aa10.5□□□□□ -0.73
ARID1A-201ENST00000324856 C10orf95Q9H7T3 257 aa10.48□□□□□ -0.73
ARID1A-201ENST00000324856 Q5VSD8 79 aa10.44□□□□□ -0.74
ARID1A-201ENST00000324856 SPEGQ15772 3267 aa10.44□□□□□ -0.74
ARID1A-201ENST00000324856 MXRA5Q9NR99 2828 aa10.41□□□□□ -0.74
ARID1A-201ENST00000324856 VWFP04275 2813 aa10.41□□□□□ -0.74
ARID1A-201ENST00000324856 PKD1L1Q8TDX9 2849 aa10.33□□□□□ -0.76
ARID1A-201ENST00000324856 KRTAP10-1P60331 282 aa10.33□□□□□ -0.76
ARID1A-201ENST00000324856 WDFY3Q8IZQ1 3526 aa10.26□□□□□ -0.77
ARID1A-201ENST00000324856 TENM4Q6N022 2769 aa10.26□□□□□ -0.77
ARID1A-201ENST00000324856 HRNRQ86YZ3 2850 aaPredicted RBP10.25□□□□□ -0.77
ARID1A-201ENST00000324856 KRTAP10-2P60368 255 aa10.25□□□□□ -0.77
ARID1A-201ENST00000324856 P0C880 135 aa10.23□□□□□ -0.77
ARID1A-201ENST00000324856 MYO15AQ9UKN7 3530 aa10.21□□□□□ -0.77
ARID1A-201ENST00000324856 EYSQ5T1H1 3165 aa10.19□□□□□ -0.78
ARID1A-201ENST00000324856 Q6ZRN7 208 aaPredicted RBP10.19□□□□□ -0.78
ARID1A-201ENST00000324856 SZT2Q5T011 3432 aa10.18□□□□□ -0.78
ARID1A-201ENST00000324856 KRTAP13-1Q8IUC0 172 aa10.16□□□□□ -0.78
ARID1A-201ENST00000324856 COL7A1Q02388 2944 aa10.15□□□□□ -0.79
ARID1A-201ENST00000324856 H0YAA0 97 aa10.13□□□□□ -0.79
ARID1A-201ENST00000324856 ASPMQ8IZT6 3477 aa10.06□□□□□ -0.8
ARID1A-201ENST00000324856 TENM2Q9NT68 2774 aa10.04□□□□□ -0.8
ARID1A-201ENST00000324856 KRTAP13-2Q52LG2 175 aa10□□□□□ -0.81
ARID1A-201ENST00000324856 KRTAP7-1Q8IUC3 87 aa9.98□□□□□ -0.81
ARID1A-201ENST00000324856 SPTBN5Q9NRC6 3674 aaKnown RBP9.97□□□□□ -0.81
ARID1A-201ENST00000324856 ZFHX3Q15911 3703 aa9.91□□□□□ -0.82
ARID1A-201ENST00000324856 LOC400499M0QZD8 3231 aa9.9□□□□□ -0.82
ARID1A-201ENST00000324856 ZFHX4Q86UP3 3567 aa9.89□□□□□ -0.83
ARID1A-201ENST00000324856 LAMA5O15230 3695 aa9.88□□□□□ -0.83
ARID1A-201ENST00000324856 MEGF8Q7Z7M0 2845 aa9.8□□□□□ -0.84
ARID1A-201ENST00000324856 KRTAP10-8P60410 259 aa9.77□□□□□ -0.84
ARID1A-201ENST00000324856 RELNP78509 3460 aa9.73□□□□□ -0.85
ARID1A-201ENST00000324856 PRO2289Q9P1D8 64 aa9.73□□□□□ -0.85
ARID1A-201ENST00000324856 NBPF19A0A087WUL8 3843 aa9.72□□□□□ -0.85
ARID1A-201ENST00000324856 SMG1Q96Q15 3661 aaKnown RBP9.71□□□□□ -0.85
ARID1A-201ENST00000324856 DCHS1Q96JQ0 3298 aa9.65□□□□□ -0.86
ARID1A-201ENST00000324856 SPENQ96T58 3664 aaKnown RBP9.64□□□□□ -0.87
ARID1A-201ENST00000324856 DMDP11532 3685 aa9.63□□□□□ -0.87
ARID1A-201ENST00000324856 FBN1P35555 2871 aaKnown RBP9.6□□□□□ -0.87
ARID1A-201ENST00000324856 XP32Q5T750 250 aa9.56□□□□□ -0.88
ARID1A-201ENST00000324856 FBN3Q75N90 2809 aa9.54□□□□□ -0.88
ARID1A-201ENST00000324856 OTOGQ6ZRI0 2925 aa9.52□□□□□ -0.89
ARID1A-201ENST00000324856 CSMD1Q96PZ7 3565 aa9.52□□□□□ -0.89
ARID1A-201ENST00000324856 TPRXLQ17RH7 258 aa9.48□□□□□ -0.89
ARID1A-201ENST00000324856 KRTAP1-4P0C5Y4 121 aa9.41□□□□□ -0.9
ARID1A-201ENST00000324856 KRTAP13-4Q3LI77 160 aa9.4□□□□□ -0.9
ARID1A-201ENST00000324856 INE1O15225 51 aa9.34□□□□□ -0.91
ARID1A-201ENST00000324856 KRTAP13-3Q3SY46 172 aa9.33□□□□□ -0.92
ARID1A-201ENST00000324856 CUBNO60494 3623 aa9.31□□□□□ -0.92
ARID1A-201ENST00000324856 KRTAP12-2P59991 146 aa9.31□□□□□ -0.92
ARID1A-201ENST00000324856 KRTAP10-10P60014 251 aa9.22□□□□□ -0.93
ARID1A-201ENST00000324856 VPS13CQ709C8 3753 aa9.16□□□□□ -0.94
ARID1A-201ENST00000324856 KRTAP12-1P59990 96 aa9.16□□□□□ -0.94
ARID1A-201ENST00000324856 A0A1B0GVY2 172 aa9.13□□□□□ -0.95
ARID1A-201ENST00000324856 SVEP1Q4LDE5 3571 aa9.1□□□□□ -0.95
ARID1A-201ENST00000324856 TRRAPQ9Y4A5 3859 aa9.07□□□□□ -0.96
ARID1A-201ENST00000324856 KRTAP21-3Q3LHN1 58 aa9□□□□□ -0.97
ARID1A-201ENST00000324856 AKAP9Q99996 3911 aa8.99□□□□□ -0.97
ARID1A-201ENST00000324856 MUC3AQ02505 3323 aa8.95□□□□□ -0.98
ARID1A-201ENST00000324856 KRTAP15-1Q3LI76 137 aa8.95□□□□□ -0.98
ARID1A-201ENST00000324856 CSMD3Q7Z407 3707 aa8.81□□□□□ -1
ARID1A-201ENST00000324856 CSMD2Q7Z408 3487 aa8.67□□□□□ -1.02
ARID1A-201ENST00000324856 KRTAP10-6P60371 365 aaPredicted RBP8.66□□□□□ -1.02
ARID1A-201ENST00000324856 KRTAP3-1Q9BYR8 98 aa8.63□□□□□ -1.03
ARID1A-201ENST00000324856 KRTAP23-1A1A580 65 aa8.55□□□□□ -1.04
ARID1A-201ENST00000324856 BSNQ9UPA5 3926 aa8.51□□□□□ -1.05
ARID1A-201ENST00000324856 ALMS1Q8TCU4 4167 aa8.4□□□□□ -1.06
ARID1A-201ENST00000324856 KRTAP10-12P60413 245 aa8.36□□□□□ -1.07
ARID1A-201ENST00000324856 KRTAP3-2Q9BYR7 98 aa8.21□□□□□ -1.09
ARID1A-201ENST00000324856 KRTAP12-3P60328 96 aa8.16□□□□□ -1.1
ARID1A-201ENST00000324856 LYSTQ99698 3801 aa8.14□□□□□ -1.11
ARID1A-201ENST00000324856 KRTAP3-3Q9BYR6 98 aa8.14□□□□□ -1.11
ARID1A-201ENST00000324856 CRCT1Q9UGL9 99 aa8.04□□□□□ -1.12
ARID1A-201ENST00000324856 ZNF469Q96JG9 3925 aaPredicted RBP7.98□□□□□ -1.13
ARID1A-201ENST00000324856 LCE3AQ5TA76 89 aa7.82□□□□□ -1.16
ARID1A-201ENST00000324856 CMYA5Q8N3K9 4069 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms