RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 PLA2G1BP04054 148 aaKnown RBP9.9□□□□□ -0.83
SSR4-201ENST00000320857 Q5XG85 94 aa9.89□□□□□ -0.83
SSR4-201ENST00000320857 FAM236DA0A1B0GTK5 79 aa9.88□□□□□ -0.83
SSR4-201ENST00000320857 FAM236CP0DP71 79 aa9.88□□□□□ -0.83
SSR4-201ENST00000320857 SMR3BP02814 79 aaPredicted RBP9.87□□□□□ -0.83
SSR4-201ENST00000320857 MP68P56378 58 aa9.87□□□□□ -0.83
SSR4-201ENST00000320857 TYMSOSQ8TAI1 123 aa9.85□□□□□ -0.83
SSR4-201ENST00000320857 LIMD2Q9BT23 127 aa9.85□□□□□ -0.83
SSR4-201ENST00000320857 C4orf48Q5BLP8 95 aa9.83□□□□□ -0.84
SSR4-201ENST00000320857 ATP5EP56381 51 aaPredicted RBP9.83□□□□□ -0.84
SSR4-201ENST00000320857 RPS28P62857 69 aaKnown RBP9.83□□□□□ -0.84
SSR4-201ENST00000320857 ZCCHC13Q8WW36 166 aaKnown RBP9.83□□□□□ -0.84
SSR4-201ENST00000320857 TP53AIP1Q9HCN2 124 aa9.82□□□□□ -0.84
SSR4-201ENST00000320857 HSPG2P98160 4391 aa9.82□□□□□ -0.84
SSR4-201ENST00000320857 H3BPC8 53 aa9.81□□□□□ -0.84
SSR4-201ENST00000320857 KRTAP10-4P60372 401 aaPredicted RBP9.81□□□□□ -0.84
SSR4-201ENST00000320857 H0Y9P7 68 aa9.8□□□□□ -0.84
SSR4-201ENST00000320857 MRPL34Q9BQ48 92 aaKnown RBP9.8□□□□□ -0.84
SSR4-201ENST00000320857 C8orf87E5RJ46 101 aa9.8□□□□□ -0.84
SSR4-201ENST00000320857 C1orf195Q5TG92 126 aa9.79□□□□□ -0.84
SSR4-201ENST00000320857 SPINK1P00995 79 aa9.78□□□□□ -0.84
SSR4-201ENST00000320857 NOTCH2NLQ7Z3S9 236 aa9.77□□□□□ -0.85
SSR4-201ENST00000320857 LINC00208Q96KT6 92 aa9.77□□□□□ -0.85
SSR4-201ENST00000320857 TRAV22A0A0B4J277 110 aa9.76□□□□□ -0.85
SSR4-201ENST00000320857 HERC2O95714 4834 aa9.75□□□□□ -0.85
SSR4-201ENST00000320857 NDUFS5O43920 106 aa9.75□□□□□ -0.85
SSR4-201ENST00000320857 PRR26Q8N8Z3 221 aa9.75□□□□□ -0.85
SSR4-201ENST00000320857 KRTAP17-1Q9BYP8 105 aa9.75□□□□□ -0.85
SSR4-201ENST00000320857 FAT1Q14517 4588 aa9.75□□□□□ -0.85
SSR4-201ENST00000320857 SPAG11AQ6PDA7 123 aa9.74□□□□□ -0.85
SSR4-201ENST00000320857 LINC00304Q8N9R0 145 aa9.73□□□□□ -0.85
SSR4-201ENST00000320857 SERP1Q9Y6X1 66 aa9.73□□□□□ -0.85
SSR4-201ENST00000320857 RPS29P62273 56 aaKnown RBP9.71□□□□□ -0.85
SSR4-201ENST00000320857 FAM229AH3BQW9 127 aa9.71□□□□□ -0.86
SSR4-201ENST00000320857 LINC00313P59037 77 aa9.71□□□□□ -0.86
SSR4-201ENST00000320857 Q5VSD8 79 aa9.71□□□□□ -0.86
SSR4-201ENST00000320857 C1orf64Q8NEQ6 169 aa9.71□□□□□ -0.86
SSR4-201ENST00000320857 Q8N1X5 172 aa9.7□□□□□ -0.86
SSR4-201ENST00000320857 OXTP01178 125 aa9.64□□□□□ -0.87
SSR4-201ENST00000320857 KRTAP4-5Q9BYR2 181 aa9.64□□□□□ -0.87
SSR4-201ENST00000320857 PKHD1L1Q86WI1 4243 aa9.61□□□□□ -0.87
SSR4-201ENST00000320857 SPANXA2-OT1Q8N9U9 137 aa9.6□□□□□ -0.87
SSR4-201ENST00000320857 ABCA13Q86UQ4 5058 aa9.59□□□□□ -0.87
SSR4-201ENST00000320857 Q8N9P0 234 aaPredicted RBP9.59□□□□□ -0.87
SSR4-201ENST00000320857 CYP4F30PQ9H0H9 118 aa9.59□□□□□ -0.87
SSR4-201ENST00000320857 KRTAP16-1A8MUX0 517 aa9.57□□□□□ -0.88
SSR4-201ENST00000320857 LOC101927531A0A1B0GV80 90 aa9.55□□□□□ -0.88
SSR4-201ENST00000320857 KRTAP13-3Q3SY46 172 aa9.55□□□□□ -0.88
SSR4-201ENST00000320857 Q5W150 140 aa9.55□□□□□ -0.88
SSR4-201ENST00000320857 PRR4Q16378 134 aa9.53□□□□□ -0.88
SSR4-201ENST00000320857 SMIM26A0A096LP01 95 aa9.51□□□□□ -0.89
SSR4-201ENST00000320857 PCOTHQ58A44 107 aa9.51□□□□□ -0.89
SSR4-201ENST00000320857 IGLV7-46A0A075B6I9 117 aa9.49□□□□□ -0.89
SSR4-201ENST00000320857 PCLOQ9Y6V0 5065 aa9.47□□□□□ -0.89
SSR4-201ENST00000320857 KRTAP10-8P60410 259 aa9.44□□□□□ -0.9
SSR4-201ENST00000320857 RETNLBQ9BQ08 111 aa9.43□□□□□ -0.9
SSR4-201ENST00000320857 FLG2Q5D862 2391 aaPredicted RBP9.4□□□□□ -0.9
SSR4-201ENST00000320857 IGKV2-30P06310 120 aa9.4□□□□□ -0.9
SSR4-201ENST00000320857 FP248Q71RG6 208 aaPredicted RBP9.39□□□□□ -0.91
SSR4-201ENST00000320857 MYCBP2O75592 4640 aa9.37□□□□□ -0.91
SSR4-201ENST00000320857 LRP1Q07954 4544 aaKnown RBP9.37□□□□□ -0.91
SSR4-201ENST00000320857 FAT3Q8TDW7 4589 aa9.36□□□□□ -0.91
SSR4-201ENST00000320857 TNXBP22105 4242 aa9.34□□□□□ -0.91
SSR4-201ENST00000320857 C9orf92A6NGG3 77 aa9.34□□□□□ -0.91
SSR4-201ENST00000320857 C4orf26Q17RF5 130 aa9.32□□□□□ -0.92
SSR4-201ENST00000320857 COA5Q86WW8 74 aa9.32□□□□□ -0.92
SSR4-201ENST00000320857 C20orf166-AS1Q96NR2 134 aa9.32□□□□□ -0.92
SSR4-201ENST00000320857 A8MUU9 505 aa9.31□□□□□ -0.92
SSR4-201ENST00000320857 HRES1P13985 223 aa9.31□□□□□ -0.92
SSR4-201ENST00000320857 IGKV2D-30A0A075B6S6 120 aa9.29□□□□□ -0.92
SSR4-201ENST00000320857 MPLKIPQ8TAP9 179 aa9.29□□□□□ -0.92
SSR4-201ENST00000320857 J3QL48 77 aa9.27□□□□□ -0.93
SSR4-201ENST00000320857 MT1HL1P0DM35 61 aa9.26□□□□□ -0.93
SSR4-201ENST00000320857 Q1T7F1 81 aa9.25□□□□□ -0.93
SSR4-201ENST00000320857 C7orf65Q6ZTY9 151 aa9.24□□□□□ -0.93
SSR4-201ENST00000320857 ACYP2P14621 99 aa9.23□□□□□ -0.93
SSR4-201ENST00000320857 DMAC1Q96GE9 116 aa9.23□□□□□ -0.93
SSR4-201ENST00000320857 V9GYY9 64 aa9.23□□□□□ -0.93
SSR4-201ENST00000320857 Q75L30 129 aa9.2□□□□□ -0.94
SSR4-201ENST00000320857 DMBT1Q9UGM3 2413 aaPredicted RBP9.15□□□□□ -0.94
SSR4-201ENST00000320857 CHKB-CPT1BH3BT56 60 aa9.11□□□□□ -0.95
SSR4-201ENST00000320857 HERC1Q15751 4861 aa9.08□□□□□ -0.96
SSR4-201ENST00000320857 PSPHP1O15172 72 aa9.07□□□□□ -0.96
SSR4-201ENST00000320857 ATP11AUNQ6ZP68 121 aa9.07□□□□□ -0.96
SSR4-201ENST00000320857 A8MUN3 132 aa9.06□□□□□ -0.96
SSR4-201ENST00000320857 SPINK7P58062 85 aa9.06□□□□□ -0.96
SSR4-201ENST00000320857 RPL37P61927 97 aaKnown RBP9.05□□□□□ -0.96
SSR4-201ENST00000320857 LINC01558Q9Y6Z2 57 aa9.04□□□□□ -0.96
SSR4-201ENST00000320857 XP32Q5T750 250 aa9.03□□□□□ -0.96
SSR4-201ENST00000320857 PRR15LQ9BU68 103 aa9.02□□□□□ -0.97
SSR4-201ENST00000320857 Q5VV11 94 aa8.98□□□□□ -0.97
SSR4-201ENST00000320857 BRK1Q8WUW1 75 aa8.93□□□□□ -0.98
SSR4-201ENST00000320857 TPRXLQ17RH7 258 aa8.92□□□□□ -0.98
SSR4-201ENST00000320857 COX6B2Q6YFQ2 88 aa8.88□□□□□ -0.99
SSR4-201ENST00000320857 KRTAP3-1Q9BYR8 98 aa8.88□□□□□ -0.99
SSR4-201ENST00000320857 PRO0628Q9UI54 55 aa8.88□□□□□ -0.99
SSR4-201ENST00000320857 HMCN2Q8NDA2 5059 aa8.87□□□□□ -0.99
SSR4-201ENST00000320857 SPTSSBQ8NFR3 76 aa8.87□□□□□ -0.99
SSR4-201ENST00000320857 A0A1B0GU69 56 aa8.81□□□□□ -1
SSR4-201ENST00000320857 A6NED7 52 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms