RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 C1orf195Q5TG92 126 aa12.33□□□□□ -0.44
CPNE7-202ENST00000319518 PLAC8Q9NZF1 115 aa12.33□□□□□ -0.44
CPNE7-202ENST00000319518 TP53AIP1Q9HCN2 124 aa12.32□□□□□ -0.44
CPNE7-202ENST00000319518 DNAH5Q8TE73 4624 aa12.32□□□□□ -0.44
CPNE7-202ENST00000319518 DNAH11Q96DT5 4516 aa12.32□□□□□ -0.44
CPNE7-202ENST00000319518 COA5Q86WW8 74 aa12.32□□□□□ -0.44
CPNE7-202ENST00000319518 A8MU10 97 aa12.31□□□□□ -0.44
CPNE7-202ENST00000319518 KRTAP10-2P60368 255 aa12.31□□□□□ -0.44
CPNE7-202ENST00000319518 ZNF706Q9Y5V0 76 aaPredicted RBP12.31□□□□□ -0.44
CPNE7-202ENST00000319518 ZNF861PO60384 105 aa12.29□□□□□ -0.44
CPNE7-202ENST00000319518 ALMS1Q8TCU4 4167 aa12.27□□□□□ -0.44
CPNE7-202ENST00000319518 NDUFS5O43920 106 aa12.26□□□□□ -0.45
CPNE7-202ENST00000319518 MRPL34Q9BQ48 92 aaKnown RBP12.25□□□□□ -0.45
CPNE7-202ENST00000319518 LIMD2Q9BT23 127 aa12.25□□□□□ -0.45
CPNE7-202ENST00000319518 KRTAP21-3Q3LHN1 58 aa12.24□□□□□ -0.45
CPNE7-202ENST00000319518 PRR15LQ9BU68 103 aa12.22□□□□□ -0.45
CPNE7-202ENST00000319518 PKD1P98161 4303 aa12.22□□□□□ -0.45
CPNE7-202ENST00000319518 FAT2Q9NYQ8 4349 aa12.22□□□□□ -0.45
CPNE7-202ENST00000319518 CDK2AP2O75956 126 aa12.2□□□□□ -0.46
CPNE7-202ENST00000319518 CHKB-CPT1BH3BT56 60 aa12.18□□□□□ -0.46
CPNE7-202ENST00000319518 CIRBP-AS1Q8TBR5 109 aa12.18□□□□□ -0.46
CPNE7-202ENST00000319518 SPINK6Q6UWN8 80 aa12.15□□□□□ -0.46
CPNE7-202ENST00000319518 LOC101927531A0A1B0GV80 90 aa12.15□□□□□ -0.47
CPNE7-202ENST00000319518 Q5W150 140 aa12.15□□□□□ -0.47
CPNE7-202ENST00000319518 IGLV7-43P04211 117 aa12.13□□□□□ -0.47
CPNE7-202ENST00000319518 KRTAP10-1P60331 282 aa12.13□□□□□ -0.47
CPNE7-202ENST00000319518 HRES1P13985 223 aa12.12□□□□□ -0.47
CPNE7-202ENST00000319518 KRTAP13-3Q3SY46 172 aa12.12□□□□□ -0.47
CPNE7-202ENST00000319518 Q75L30 129 aa12.11□□□□□ -0.47
CPNE7-202ENST00000319518 LRP1BQ9NZR2 4599 aa12.11□□□□□ -0.47
CPNE7-202ENST00000319518 SPAG11AQ6PDA7 123 aa12.09□□□□□ -0.47
CPNE7-202ENST00000319518 LCA10Q71F78 164 aa12.08□□□□□ -0.48
CPNE7-202ENST00000319518 LINC01558Q9Y6Z2 57 aa12.05□□□□□ -0.48
CPNE7-202ENST00000319518 SACSQ9NZJ4 4579 aa12.05□□□□□ -0.48
CPNE7-202ENST00000319518 PMAIP1Q13794 54 aa12.04□□□□□ -0.48
CPNE7-202ENST00000319518 Q6ZSA8 131 aa12.02□□□□□ -0.48
CPNE7-202ENST00000319518 A6NED7 52 aa12.01□□□□□ -0.49
CPNE7-202ENST00000319518 PKHD1P08F94 4074 aa12□□□□□ -0.49
CPNE7-202ENST00000319518 SSBP3-AS1Q7Z2R9 100 aa11.97□□□□□ -0.49
CPNE7-202ENST00000319518 VPS13BQ7Z7G8 4022 aa11.95□□□□□ -0.5
CPNE7-202ENST00000319518 PRR26Q8N8Z3 221 aa11.94□□□□□ -0.5
CPNE7-202ENST00000319518 C8orf87E5RJ46 101 aa11.92□□□□□ -0.5
CPNE7-202ENST00000319518 KRTAP13-2Q52LG2 175 aa11.92□□□□□ -0.5
CPNE7-202ENST00000319518 SPTSSBQ8NFR3 76 aa11.92□□□□□ -0.5
CPNE7-202ENST00000319518 CDC42SE1Q9NRR8 79 aa11.9□□□□□ -0.5
CPNE7-202ENST00000319518 SPINK7P58062 85 aa11.9□□□□□ -0.5
CPNE7-202ENST00000319518 ATP11AUNQ6ZP68 121 aa11.89□□□□□ -0.51
CPNE7-202ENST00000319518 LINC00313P59037 77 aa11.87□□□□□ -0.51
CPNE7-202ENST00000319518 RETNLBQ9BQ08 111 aa11.86□□□□□ -0.51
CPNE7-202ENST00000319518 ACYP2P14621 99 aa11.82□□□□□ -0.52
CPNE7-202ENST00000319518 DMAC1Q96GE9 116 aa11.82□□□□□ -0.52
CPNE7-202ENST00000319518 SEC61GP60059 68 aa11.81□□□□□ -0.52
CPNE7-202ENST00000319518 A6NN06 94 aa11.8□□□□□ -0.52
CPNE7-202ENST00000319518 KRTAP16-1A8MUX0 517 aa11.8□□□□□ -0.52
CPNE7-202ENST00000319518 FAM229AH3BQW9 127 aa11.8□□□□□ -0.52
CPNE7-202ENST00000319518 DYNC1H1Q14204 4646 aaKnown RBP11.79□□□□□ -0.52
CPNE7-202ENST00000319518 IGKV2-30P06310 120 aa11.77□□□□□ -0.52
CPNE7-202ENST00000319518 KRTAP1-4P0C5Y4 121 aa11.77□□□□□ -0.52
CPNE7-202ENST00000319518 KTN1-AS1Q86SY8 53 aa11.74□□□□□ -0.53
CPNE7-202ENST00000319518 KMT2CQ8NEZ4 4911 aaKnown RBP11.73□□□□□ -0.53
CPNE7-202ENST00000319518 RYR2Q92736 4967 aa11.72□□□□□ -0.53
CPNE7-202ENST00000319518 SMR3BP02814 79 aaPredicted RBP11.71□□□□□ -0.53
CPNE7-202ENST00000319518 PLA2G1BP04054 148 aaKnown RBP11.67□□□□□ -0.54
CPNE7-202ENST00000319518 A0A1B0GVY2 172 aa11.66□□□□□ -0.54
CPNE7-202ENST00000319518 FAT1Q14517 4588 aa11.66□□□□□ -0.54
CPNE7-202ENST00000319518 APOBP04114 4563 aaKnown RBP11.63□□□□□ -0.55
CPNE7-202ENST00000319518 IGKV2D-30A0A075B6S6 120 aa11.61□□□□□ -0.55
CPNE7-202ENST00000319518 TYMSOSQ8TAI1 123 aa11.59□□□□□ -0.55
CPNE7-202ENST00000319518 A0A1B0GU69 56 aa11.55□□□□□ -0.56
CPNE7-202ENST00000319518 C7orf65Q6ZTY9 151 aa11.52□□□□□ -0.56
CPNE7-202ENST00000319518 RBM12B-AS1Q9P1G2 102 aa11.51□□□□□ -0.57
CPNE7-202ENST00000319518 C4orf48Q5BLP8 95 aa11.5□□□□□ -0.57
CPNE7-202ENST00000319518 SPINK1P00995 79 aa11.48□□□□□ -0.57
CPNE7-202ENST00000319518 KRTAP10-4P60372 401 aaPredicted RBP11.47□□□□□ -0.57
CPNE7-202ENST00000319518 SPATA8Q6RVD6 105 aa11.45□□□□□ -0.58
CPNE7-202ENST00000319518 LINC00304Q8N9R0 145 aa11.42□□□□□ -0.58
CPNE7-202ENST00000319518 RYR3Q15413 4870 aa11.4□□□□□ -0.58
CPNE7-202ENST00000319518 Q8N1X5 172 aa11.37□□□□□ -0.59
CPNE7-202ENST00000319518 PKHD1L1Q86WI1 4243 aa11.36□□□□□ -0.59
CPNE7-202ENST00000319518 MIR22HGQ0VDD5 57 aa11.36□□□□□ -0.59
CPNE7-202ENST00000319518 UQCR11O14957 56 aa11.35□□□□□ -0.59
CPNE7-202ENST00000319518 RPS29P62273 56 aaKnown RBP11.3□□□□□ -0.6
CPNE7-202ENST00000319518 ADM2Q7Z4H4 148 aa11.3□□□□□ -0.6
CPNE7-202ENST00000319518 PRAC1Q96KF2 57 aa11.3□□□□□ -0.6
CPNE7-202ENST00000319518 HSPG2P98160 4391 aa11.25□□□□□ -0.61
CPNE7-202ENST00000319518 LRP1Q07954 4544 aaKnown RBP11.23□□□□□ -0.61
CPNE7-202ENST00000319518 C9orf92A6NGG3 77 aa11.23□□□□□ -0.61
CPNE7-202ENST00000319518 A8MUU9 505 aa11.19□□□□□ -0.62
CPNE7-202ENST00000319518 C20orf166-AS1Q96NR2 134 aa11.19□□□□□ -0.62
CPNE7-202ENST00000319518 KRTAP3-1Q9BYR8 98 aa11.18□□□□□ -0.62
CPNE7-202ENST00000319518 KRTAP17-1Q9BYP8 105 aa11.14□□□□□ -0.63
CPNE7-202ENST00000319518 Q5VSD8 79 aa11.13□□□□□ -0.63
CPNE7-202ENST00000319518 RYR1P21817 5038 aa11.13□□□□□ -0.63
CPNE7-202ENST00000319518 TNXBP22105 4242 aa11.11□□□□□ -0.63
CPNE7-202ENST00000319518 FLG2Q5D862 2391 aaPredicted RBP11.1□□□□□ -0.63
CPNE7-202ENST00000319518 KIAA1109Q2LD37 5005 aa11.08□□□□□ -0.64
CPNE7-202ENST00000319518 H0YAA0 97 aa11.05□□□□□ -0.64
CPNE7-202ENST00000319518 FAT3Q8TDW7 4589 aa11.02□□□□□ -0.65
CPNE7-202ENST00000319518 EPPK1P58107 5090 aaKnown RBP11□□□□□ -0.65
CPNE7-202ENST00000319518 KRTAP10-8P60410 259 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms