RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 C8orf87E5RJ46 101 aa15.18■□□□□ 0.02
SYNGR1-202ENST00000318801 A0A1B0GVX0 72 aa15.17■□□□□ 0.02
SYNGR1-202ENST00000318801 NDUFB1O75438 58 aa15.15■□□□□ 0.02
SYNGR1-202ENST00000318801 M0R2T5 61 aa15.14■□□□□ 0.01
SYNGR1-202ENST00000318801 KRTAP16-1A8MUX0 517 aa15.13■□□□□ 0.01
SYNGR1-202ENST00000318801 NOTCH2NLQ7Z3S9 236 aa15.13■□□□□ 0.01
SYNGR1-202ENST00000318801 C14orf132Q9NPU4 83 aa15.13■□□□□ 0.01
SYNGR1-202ENST00000318801 A0A1W2PPM0 123 aa15.11■□□□□ 0.01
SYNGR1-202ENST00000318801 TAX1BP3O14907 124 aa15.09■□□□□ 0.01
SYNGR1-202ENST00000318801 H3BT86 120 aa15.07■□□□□ 0
SYNGR1-202ENST00000318801 NREPQ16612 68 aa15.02■□□□□ -0
SYNGR1-202ENST00000318801 A8MWP4 228 aa14.99□□□□□ -0.01
SYNGR1-202ENST00000318801 MTURNQ8N3F0 131 aa14.93□□□□□ -0.02
SYNGR1-202ENST00000318801 SPCS1Q9Y6A9 102 aa14.93□□□□□ -0.02
SYNGR1-202ENST00000318801 KRTAP10-6P60371 365 aaPredicted RBP14.91□□□□□ -0.02
SYNGR1-202ENST00000318801 LCE2DQ5TA82 110 aaPredicted RBP14.91□□□□□ -0.02
SYNGR1-202ENST00000318801 COL5A1-AS1Q5SY13 56 aa14.9□□□□□ -0.02
SYNGR1-202ENST00000318801 C8orf17Q9NRJ1 99 aa14.89□□□□□ -0.03
SYNGR1-202ENST00000318801 FLGP20930 4061 aaPredicted RBP14.89□□□□□ -0.03
SYNGR1-202ENST00000318801 IGKV3D-7A0A0C4DH55 119 aa14.87□□□□□ -0.03
SYNGR1-202ENST00000318801 RBM12B-AS1Q9P1G2 102 aa14.87□□□□□ -0.03
SYNGR1-202ENST00000318801 LORP23490 312 aaPredicted RBP14.86□□□□□ -0.03
SYNGR1-202ENST00000318801 ZCCHC13Q8WW36 166 aaKnown RBP14.86□□□□□ -0.03
SYNGR1-202ENST00000318801 FAM236DA0A1B0GTK5 79 aa14.85□□□□□ -0.03
SYNGR1-202ENST00000318801 FAM236CP0DP71 79 aa14.85□□□□□ -0.03
SYNGR1-202ENST00000318801 PRR15Q8IV56 129 aa14.85□□□□□ -0.03
SYNGR1-202ENST00000318801 Q8N9P0 234 aaPredicted RBP14.85□□□□□ -0.03
SYNGR1-202ENST00000318801 Q6ZVQ6 151 aa14.81□□□□□ -0.04
SYNGR1-202ENST00000318801 BPY2O14599 106 aa14.74□□□□□ -0.05
SYNGR1-202ENST00000318801 HRES1P13985 223 aa14.73□□□□□ -0.05
SYNGR1-202ENST00000318801 SPINK7P58062 85 aa14.71□□□□□ -0.06
SYNGR1-202ENST00000318801 TMEM254Q8TBM7 123 aa14.7□□□□□ -0.06
SYNGR1-202ENST00000318801 KRTAP9-6A0A140TA67 174 aa14.68□□□□□ -0.06
SYNGR1-202ENST00000318801 MPLKIPQ8TAP9 179 aa14.68□□□□□ -0.06
SYNGR1-202ENST00000318801 MRPL34Q9BQ48 92 aaKnown RBP14.68□□□□□ -0.06
SYNGR1-202ENST00000318801 K7EP34 96 aa14.67□□□□□ -0.06
SYNGR1-202ENST00000318801 hDV103S1A0JD37 113 aa14.66□□□□□ -0.06
SYNGR1-202ENST00000318801 K7EQZ3 153 aa14.66□□□□□ -0.06
SYNGR1-202ENST00000318801 SMCPP49901 116 aaPredicted RBP14.66□□□□□ -0.06
SYNGR1-202ENST00000318801 MMP24-AS1A0A0U1RRL7 71 aa14.65□□□□□ -0.06
SYNGR1-202ENST00000318801 NDUFS5O43920 106 aa14.61□□□□□ -0.07
SYNGR1-202ENST00000318801 GTF2H5Q6ZYL4 71 aa14.61□□□□□ -0.07
SYNGR1-202ENST00000318801 PRO0461Q9UI25 63 aa14.59□□□□□ -0.07
SYNGR1-202ENST00000318801 PCP4L1A6NKN8 68 aa14.58□□□□□ -0.08
SYNGR1-202ENST00000318801 UBL5Q9BZL1 73 aa14.58□□□□□ -0.08
SYNGR1-202ENST00000318801 FSIP2Q5CZC0 6907 aa14.5□□□□□ -0.09
SYNGR1-202ENST00000318801 F8W1H4 67 aa14.48□□□□□ -0.09
SYNGR1-202ENST00000318801 CASC2Q6XLA1 102 aa14.48□□□□□ -0.09
SYNGR1-202ENST00000318801 WFDC13Q8IUB5 93 aa14.47□□□□□ -0.09
SYNGR1-202ENST00000318801 LINC00846Q9NV44 126 aa14.47□□□□□ -0.09
SYNGR1-202ENST00000318801 Q8N9L7 120 aa14.47□□□□□ -0.09
SYNGR1-202ENST00000318801 CRCT1Q9UGL9 99 aa14.46□□□□□ -0.1
SYNGR1-202ENST00000318801 KRTAP9-8Q9BYQ0 159 aa14.4□□□□□ -0.1
SYNGR1-202ENST00000318801 HCG22E2RYF7 251 aa14.35□□□□□ -0.11
SYNGR1-202ENST00000318801 ETDBQ3ZM63 59 aa14.34□□□□□ -0.11
SYNGR1-202ENST00000318801 CXCL6P80162 114 aa14.33□□□□□ -0.12
SYNGR1-202ENST00000318801 IGKV2D-30A0A075B6S6 120 aa14.32□□□□□ -0.12
SYNGR1-202ENST00000318801 IGKV2-30P06310 120 aa14.32□□□□□ -0.12
SYNGR1-202ENST00000318801 C7orf65Q6ZTY9 151 aa14.3□□□□□ -0.12
SYNGR1-202ENST00000318801 Q5W150 140 aa14.28□□□□□ -0.12
SYNGR1-202ENST00000318801 MT2AP02795 61 aa14.22□□□□□ -0.13
SYNGR1-202ENST00000318801 H1FX-AS1Q4G0G2 97 aa14.19□□□□□ -0.14
SYNGR1-202ENST00000318801 KRTAP10-10P60014 251 aa14.18□□□□□ -0.14
SYNGR1-202ENST00000318801 ACYP1P07311 99 aa14.12□□□□□ -0.15
SYNGR1-202ENST00000318801 TP53AIP1Q9HCN2 124 aa14.12□□□□□ -0.15
SYNGR1-202ENST00000318801 MT1FP04733 61 aa14.09□□□□□ -0.15
SYNGR1-202ENST00000318801 C4orf26Q17RF5 130 aa14.02□□□□□ -0.17
SYNGR1-202ENST00000318801 FAM240AA0A1B0GVK7 77 aa13.99□□□□□ -0.17
SYNGR1-202ENST00000318801 ATP5EP2Q5VTU8 51 aa13.95□□□□□ -0.18
SYNGR1-202ENST00000318801 KRTAP9-3Q9BYQ3 159 aa13.95□□□□□ -0.18
SYNGR1-202ENST00000318801 HIST1H4AP62805 103 aaKnown RBP13.85□□□□□ -0.19
SYNGR1-202ENST00000318801 USH2AO75445 5202 aa13.84□□□□□ -0.19
SYNGR1-202ENST00000318801 LCE2BO14633 110 aa13.82□□□□□ -0.2
SYNGR1-202ENST00000318801 C1orf64Q8NEQ6 169 aa13.82□□□□□ -0.2
SYNGR1-202ENST00000318801 TRAV22A0A0B4J277 110 aa13.77□□□□□ -0.21
SYNGR1-202ENST00000318801 LINC00643Q86TS7 51 aa13.74□□□□□ -0.21
SYNGR1-202ENST00000318801 CYP4F30PQ9H0H9 118 aa13.73□□□□□ -0.21
SYNGR1-202ENST00000318801 S4R3F8 94 aa13.73□□□□□ -0.21
SYNGR1-202ENST00000318801 A0A1B0GV90 55 aa13.72□□□□□ -0.21
SYNGR1-202ENST00000318801 LOC101927531A0A1B0GV80 90 aa13.71□□□□□ -0.22
SYNGR1-202ENST00000318801 KRTAP3-1Q9BYR8 98 aa13.71□□□□□ -0.22
SYNGR1-202ENST00000318801 C5orf47Q569G3 176 aa13.7□□□□□ -0.22
SYNGR1-202ENST00000318801 UQCRQO14949 82 aa13.69□□□□□ -0.22
SYNGR1-202ENST00000318801 CSAG1Q6PB30 78 aa13.67□□□□□ -0.22
SYNGR1-202ENST00000318801 SSPOA2VEC9 5147 aa13.65□□□□□ -0.22
SYNGR1-202ENST00000318801 ATOX1O00244 68 aa13.64□□□□□ -0.23
SYNGR1-202ENST00000318801 J3QR89 54 aa13.59□□□□□ -0.23
SYNGR1-202ENST00000318801 H0Y9P7 68 aa13.58□□□□□ -0.24
SYNGR1-202ENST00000318801 LCA10Q71F78 164 aa13.58□□□□□ -0.24
SYNGR1-202ENST00000318801 A0A087WVE0 104 aa13.56□□□□□ -0.24
SYNGR1-202ENST00000318801 FAM236AA0A1B0GUQ0 79 aa13.56□□□□□ -0.24
SYNGR1-202ENST00000318801 FAM236BA0A1B0GV22 79 aa13.56□□□□□ -0.24
SYNGR1-202ENST00000318801 KRTAP19-1Q8IUB9 90 aa13.56□□□□□ -0.24
SYNGR1-202ENST00000318801 MP68P56378 58 aa13.42□□□□□ -0.26
SYNGR1-202ENST00000318801 FCGBPQ9Y6R7 5405 aaPredicted RBP13.41□□□□□ -0.26
SYNGR1-202ENST00000318801 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.4□□□□□ -0.26
SYNGR1-202ENST00000318801 LINC00208Q96KT6 92 aa13.39□□□□□ -0.27
SYNGR1-202ENST00000318801 KRTAP19-6Q3LI70 58 aa13.36□□□□□ -0.27
SYNGR1-202ENST00000318801 OCR1Q9BZK8 76 aa13.33□□□□□ -0.27
SYNGR1-202ENST00000318801 KRTAP3-3Q9BYR6 98 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms