RNA–Protein interactions for RNA: ENST00000317620.13

PROM2-201, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-201ENST00000317620 MYO15AQ9UKN7 3530 aa7.94□□□□□ -1.14
PROM2-201ENST00000317620 KRTAP29-1A8MX34 341 aaPredicted RBP7.94□□□□□ -1.14
PROM2-201ENST00000317620 KRTAP7-1Q8IUC3 87 aa7.94□□□□□ -1.14
PROM2-201ENST00000317620 M0R2T5 61 aa7.92□□□□□ -1.14
PROM2-201ENST00000317620 DMAC1Q96GE9 116 aa7.92□□□□□ -1.14
PROM2-201ENST00000317620 S4R3F8 94 aa7.91□□□□□ -1.14
PROM2-201ENST00000317620 CAMK2N1Q7Z7J9 78 aa7.91□□□□□ -1.14
PROM2-201ENST00000317620 TENM3Q9P273 2699 aa7.91□□□□□ -1.14
PROM2-201ENST00000317620 NOTCH2NLQ7Z3S9 236 aa7.88□□□□□ -1.15
PROM2-201ENST00000317620 SEC61BP60468 96 aaKnown RBP7.87□□□□□ -1.15
PROM2-201ENST00000317620 ASB16-AS1Q495Z4 193 aa7.87□□□□□ -1.15
PROM2-201ENST00000317620 MUC3AQ02505 3323 aa7.85□□□□□ -1.15
PROM2-201ENST00000317620 PRAC1Q96KF2 57 aa7.81□□□□□ -1.16
PROM2-201ENST00000317620 H3BS24 57 aa7.81□□□□□ -1.16
PROM2-201ENST00000317620 R4GN34 69 aa7.8□□□□□ -1.16
PROM2-201ENST00000317620 TENM1Q9UKZ4 2725 aa7.78□□□□□ -1.16
PROM2-201ENST00000317620 KRTAP13-1Q8IUC0 172 aa7.78□□□□□ -1.16
PROM2-201ENST00000317620 MXRA5Q9NR99 2828 aa7.78□□□□□ -1.16
PROM2-201ENST00000317620 DCHS1Q96JQ0 3298 aa7.78□□□□□ -1.16
PROM2-201ENST00000317620 LUZP6Q538Z0 58 aa7.77□□□□□ -1.17
PROM2-201ENST00000317620 KRTAP13-2Q52LG2 175 aa7.75□□□□□ -1.17
PROM2-201ENST00000317620 RPS29P62273 56 aaKnown RBP7.73□□□□□ -1.17
PROM2-201ENST00000317620 RPL37P61927 97 aaKnown RBP7.69□□□□□ -1.18
PROM2-201ENST00000317620 CELSR1Q9NYQ6 3014 aa7.69□□□□□ -1.18
PROM2-201ENST00000317620 RELNP78509 3460 aa7.69□□□□□ -1.18
PROM2-201ENST00000317620 DMDP11532 3685 aa7.68□□□□□ -1.18
PROM2-201ENST00000317620 PKD1L1Q8TDX9 2849 aa7.68□□□□□ -1.18
PROM2-201ENST00000317620 H1FX-AS1Q4G0G2 97 aa7.67□□□□□ -1.18
PROM2-201ENST00000317620 M0QZ58 72 aa7.65□□□□□ -1.18
PROM2-201ENST00000317620 KRTAP21-3Q3LHN1 58 aa7.63□□□□□ -1.19
PROM2-201ENST00000317620 SPATA8Q6RVD6 105 aa7.63□□□□□ -1.19
PROM2-201ENST00000317620 ROMO1P60602 79 aa7.6□□□□□ -1.19
PROM2-201ENST00000317620 TENM2Q9NT68 2774 aa7.6□□□□□ -1.19
PROM2-201ENST00000317620 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
PROM2-201ENST00000317620 WDFY3Q8IZQ1 3526 aa7.58□□□□□ -1.2
PROM2-201ENST00000317620 A6NN06 94 aa7.54□□□□□ -1.2
PROM2-201ENST00000317620 LAMA5O15230 3695 aa7.5□□□□□ -1.21
PROM2-201ENST00000317620 VWFP04275 2813 aa7.49□□□□□ -1.21
PROM2-201ENST00000317620 PDZD2O15018 2839 aa7.49□□□□□ -1.21
PROM2-201ENST00000317620 TGP01266 2768 aa7.47□□□□□ -1.21
PROM2-201ENST00000317620 A8MU10 97 aa7.47□□□□□ -1.21
PROM2-201ENST00000317620 ASPMQ8IZT6 3477 aa7.46□□□□□ -1.22
PROM2-201ENST00000317620 FBN1P35555 2871 aaKnown RBP7.46□□□□□ -1.22
PROM2-201ENST00000317620 A0A0A0MQY5 61 aa7.45□□□□□ -1.22
PROM2-201ENST00000317620 KRTAP1-4P0C5Y4 121 aa7.43□□□□□ -1.22
PROM2-201ENST00000317620 A8MUU9 505 aa7.42□□□□□ -1.22
PROM2-201ENST00000317620 PLAC4Q8WY50 150 aa7.4□□□□□ -1.23
PROM2-201ENST00000317620 C20orf166-AS1Q96NR2 134 aa7.39□□□□□ -1.23
PROM2-201ENST00000317620 ZFHX4Q86UP3 3567 aa7.36□□□□□ -1.23
PROM2-201ENST00000317620 OTOGQ6ZRI0 2925 aa7.33□□□□□ -1.24
PROM2-201ENST00000317620 SRRM2Q9UQ35 2752 aaKnown RBP7.33□□□□□ -1.24
PROM2-201ENST00000317620 KRTAP25-1Q3LHN0 102 aa7.31□□□□□ -1.24
PROM2-201ENST00000317620 XP32Q5T750 250 aa7.25□□□□□ -1.25
PROM2-201ENST00000317620 ZFHX3Q15911 3703 aa7.24□□□□□ -1.25
PROM2-201ENST00000317620 NBPF19A0A087WUL8 3843 aa7.19□□□□□ -1.26
PROM2-201ENST00000317620 KRTAP16-1A8MUX0 517 aa7.16□□□□□ -1.26
PROM2-201ENST00000317620 CSMD1Q96PZ7 3565 aa7.15□□□□□ -1.26
PROM2-201ENST00000317620 SMG1Q96Q15 3661 aaKnown RBP7.14□□□□□ -1.27
PROM2-201ENST00000317620 BSNQ9UPA5 3926 aa7.11□□□□□ -1.27
PROM2-201ENST00000317620 TPRXLQ17RH7 258 aa7.09□□□□□ -1.27
PROM2-201ENST00000317620 FBN3Q75N90 2809 aa7.06□□□□□ -1.28
PROM2-201ENST00000317620 CUBNO60494 3623 aa7.05□□□□□ -1.28
PROM2-201ENST00000317620 TNP1P09430 55 aa7.05□□□□□ -1.28
PROM2-201ENST00000317620 KRTAP13-3Q3SY46 172 aa7.05□□□□□ -1.28
PROM2-201ENST00000317620 NDUFAF8A1L188 74 aa7.04□□□□□ -1.28
PROM2-201ENST00000317620 SPENQ96T58 3664 aaKnown RBP7.03□□□□□ -1.28
PROM2-201ENST00000317620 PP632Q6XCG6 107 aa7.02□□□□□ -1.29
PROM2-201ENST00000317620 A0A1B0GVY2 172 aa7.02□□□□□ -1.29
PROM2-201ENST00000317620 SVEP1Q4LDE5 3571 aa7.01□□□□□ -1.29
PROM2-201ENST00000317620 CSMD2Q7Z408 3487 aa7.01□□□□□ -1.29
PROM2-201ENST00000317620 H0YAA0 97 aa7□□□□□ -1.29
PROM2-201ENST00000317620 KRTAP10-8P60410 259 aa6.99□□□□□ -1.29
PROM2-201ENST00000317620 COL7A1Q02388 2944 aa6.94□□□□□ -1.3
PROM2-201ENST00000317620 P0C880 135 aa6.92□□□□□ -1.3
PROM2-201ENST00000317620 C10orf95Q9H7T3 257 aa6.92□□□□□ -1.3
PROM2-201ENST00000317620 MEGF8Q7Z7M0 2845 aa6.88□□□□□ -1.31
PROM2-201ENST00000317620 TRRAPQ9Y4A5 3859 aa6.84□□□□□ -1.31
PROM2-201ENST00000317620 KRTAP10-10P60014 251 aa6.84□□□□□ -1.31
PROM2-201ENST00000317620 ANK3Q12955 4377 aaKnown RBP6.79□□□□□ -1.32
PROM2-201ENST00000317620 KRTAP3-1Q9BYR8 98 aa6.65□□□□□ -1.34
PROM2-201ENST00000317620 PRO2289Q9P1D8 64 aa6.61□□□□□ -1.35
PROM2-201ENST00000317620 KRTAP12-2P59991 146 aa6.59□□□□□ -1.35
PROM2-201ENST00000317620 VPS13CQ709C8 3753 aa6.59□□□□□ -1.36
PROM2-201ENST00000317620 ZNF469Q96JG9 3925 aaPredicted RBP6.52□□□□□ -1.37
PROM2-201ENST00000317620 KRTAP12-1P59990 96 aa6.51□□□□□ -1.37
PROM2-201ENST00000317620 MT1HL1P0DM35 61 aa6.47□□□□□ -1.37
PROM2-201ENST00000317620 KRTAP10-6P60371 365 aaPredicted RBP6.42□□□□□ -1.38
PROM2-201ENST00000317620 KRTAP13-4Q3LI77 160 aa6.41□□□□□ -1.38
PROM2-201ENST00000317620 AKAP9Q99996 3911 aa6.41□□□□□ -1.38
PROM2-201ENST00000317620 KRTAP10-4P60372 401 aaPredicted RBP6.36□□□□□ -1.39
PROM2-201ENST00000317620 HUWE1Q7Z6Z7 4374 aaKnown RBP6.34□□□□□ -1.39
PROM2-201ENST00000317620 KRTAP4-5Q9BYR2 181 aa6.31□□□□□ -1.4
PROM2-201ENST00000317620 KRTAP3-3Q9BYR6 98 aa6.24□□□□□ -1.41
PROM2-201ENST00000317620 CSMD3Q7Z407 3707 aa6.24□□□□□ -1.41
PROM2-201ENST00000317620 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.41
PROM2-201ENST00000317620 DNHD1Q96M86 4753 aa6.09□□□□□ -1.43
PROM2-201ENST00000317620 DNAH5Q8TE73 4624 aa6.09□□□□□ -1.43
PROM2-201ENST00000317620 DNAH9Q9NYC9 4486 aa6.08□□□□□ -1.44
PROM2-201ENST00000317620 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
PROM2-201ENST00000317620 PLECQ15149 4684 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms