RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 J3KT08 172 aa8.99□□□□□ -0.97
TPM1-203ENST00000317516 RBM12B-AS1Q9P1G2 102 aa8.99□□□□□ -0.97
TPM1-203ENST00000317516 A0A1B0GVX0 72 aa8.98□□□□□ -0.97
TPM1-203ENST00000317516 M0R143 59 aa8.96□□□□□ -0.98
TPM1-203ENST00000317516 NDUFB1O75438 58 aa8.94□□□□□ -0.98
TPM1-203ENST00000317516 ATXN8Q156A1 80 aa8.94□□□□□ -0.98
TPM1-203ENST00000317516 Q6ZQT0 140 aa8.94□□□□□ -0.98
TPM1-203ENST00000317516 JMJD7-PLA2G4BH0Y9G9 81 aa8.93□□□□□ -0.98
TPM1-203ENST00000317516 A0A1B0GW54 56 aa8.91□□□□□ -0.98
TPM1-203ENST00000317516 HRES1P13985 223 aa8.91□□□□□ -0.98
TPM1-203ENST00000317516 KRTAP9-8Q9BYQ0 159 aa8.91□□□□□ -0.98
TPM1-203ENST00000317516 MPLKIPQ8TAP9 179 aa8.9□□□□□ -0.98
TPM1-203ENST00000317516 PDE6GP18545 87 aa8.89□□□□□ -0.99
TPM1-203ENST00000317516 MTURNQ8N3F0 131 aa8.89□□□□□ -0.99
TPM1-203ENST00000317516 ZCCHC13Q8WW36 166 aaKnown RBP8.88□□□□□ -0.99
TPM1-203ENST00000317516 LOC110117498A0A087WWA1 95 aa8.86□□□□□ -0.99
TPM1-203ENST00000317516 NAA38Q9BRA0 125 aaKnown RBP8.86□□□□□ -0.99
TPM1-203ENST00000317516 LYRM7Q5U5X0 104 aa8.85□□□□□ -0.99
TPM1-203ENST00000317516 SMIM6P0DI80 62 aa8.84□□□□□ -0.99
TPM1-203ENST00000317516 A8MWP4 228 aa8.83□□□□□ -1
TPM1-203ENST00000317516 Q8N9P0 234 aaPredicted RBP8.83□□□□□ -1
TPM1-203ENST00000317516 SPINK7P58062 85 aa8.82□□□□□ -1
TPM1-203ENST00000317516 C8orf17Q9NRJ1 99 aa8.81□□□□□ -1
TPM1-203ENST00000317516 C14orf132Q9NPU4 83 aa8.79□□□□□ -1
TPM1-203ENST00000317516 NREPQ16612 68 aa8.78□□□□□ -1
TPM1-203ENST00000317516 IGKV3D-7A0A0C4DH55 119 aa8.77□□□□□ -1.01
TPM1-203ENST00000317516 MT2AP02795 61 aa8.77□□□□□ -1.01
TPM1-203ENST00000317516 LOC105371267A0A1B0GV96 52 aa8.76□□□□□ -1.01
TPM1-203ENST00000317516 Q6ZVQ6 151 aa8.75□□□□□ -1.01
TPM1-203ENST00000317516 TSTD3H0UI37 97 aa8.74□□□□□ -1.01
TPM1-203ENST00000317516 PRR15Q8IV56 129 aa8.74□□□□□ -1.01
TPM1-203ENST00000317516 KRTAP10-10P60014 251 aa8.73□□□□□ -1.01
TPM1-203ENST00000317516 BATFQ16520 125 aa8.72□□□□□ -1.01
TPM1-203ENST00000317516 MT1FP04733 61 aa8.69□□□□□ -1.02
TPM1-203ENST00000317516 WFDC13Q8IUB5 93 aa8.68□□□□□ -1.02
TPM1-203ENST00000317516 TMEM254Q8TBM7 123 aa8.67□□□□□ -1.02
TPM1-203ENST00000317516 MRPL34Q9BQ48 92 aaKnown RBP8.67□□□□□ -1.02
TPM1-203ENST00000317516 H3BT86 120 aa8.66□□□□□ -1.02
TPM1-203ENST00000317516 C9orf118A6NHY6 69 aa8.65□□□□□ -1.02
TPM1-203ENST00000317516 MMP24-AS1A0A0U1RRL7 71 aa8.64□□□□□ -1.03
TPM1-203ENST00000317516 KRTAP9-3Q9BYQ3 159 aa8.64□□□□□ -1.03
TPM1-203ENST00000317516 hDV103S1A0JD37 113 aa8.63□□□□□ -1.03
TPM1-203ENST00000317516 TAX1BP3O14907 124 aa8.62□□□□□ -1.03
TPM1-203ENST00000317516 A0A1W2PPM0 123 aa8.61□□□□□ -1.03
TPM1-203ENST00000317516 NDUFS5O43920 106 aa8.61□□□□□ -1.03
TPM1-203ENST00000317516 USH2AO75445 5202 aa8.61□□□□□ -1.03
TPM1-203ENST00000317516 K7EQZ3 153 aa8.6□□□□□ -1.03
TPM1-203ENST00000317516 BPY2O14599 106 aa8.6□□□□□ -1.03
TPM1-203ENST00000317516 LCE2BO14633 110 aa8.59□□□□□ -1.03
TPM1-203ENST00000317516 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.56□□□□□ -1.04
TPM1-203ENST00000317516 H1FX-AS1Q4G0G2 97 aa8.53□□□□□ -1.04
TPM1-203ENST00000317516 SSPOA2VEC9 5147 aa8.53□□□□□ -1.04
TPM1-203ENST00000317516 KRTAP19-1Q8IUB9 90 aa8.51□□□□□ -1.05
TPM1-203ENST00000317516 IGKV2D-30A0A075B6S6 120 aa8.49□□□□□ -1.05
TPM1-203ENST00000317516 KRTAP9-7A8MTY7 169 aa8.49□□□□□ -1.05
TPM1-203ENST00000317516 IGKV2-30P06310 120 aa8.49□□□□□ -1.05
TPM1-203ENST00000317516 C7orf65Q6ZTY9 151 aa8.49□□□□□ -1.05
TPM1-203ENST00000317516 LINC00846Q9NV44 126 aa8.49□□□□□ -1.05
TPM1-203ENST00000317516 SPCS1Q9Y6A9 102 aa8.49□□□□□ -1.05
TPM1-203ENST00000317516 CASC2Q6XLA1 102 aa8.48□□□□□ -1.05
TPM1-203ENST00000317516 Q5W150 140 aa8.46□□□□□ -1.06
TPM1-203ENST00000317516 HCG22E2RYF7 251 aa8.44□□□□□ -1.06
TPM1-203ENST00000317516 SMCPP49901 116 aaPredicted RBP8.44□□□□□ -1.06
TPM1-203ENST00000317516 Q8N9L7 120 aa8.44□□□□□ -1.06
TPM1-203ENST00000317516 CXCL6P80162 114 aa8.42□□□□□ -1.06
TPM1-203ENST00000317516 UBL5Q9BZL1 73 aa8.42□□□□□ -1.06
TPM1-203ENST00000317516 FCGBPQ9Y6R7 5405 aaPredicted RBP8.4□□□□□ -1.06
TPM1-203ENST00000317516 COL5A1-AS1Q5SY13 56 aa8.38□□□□□ -1.07
TPM1-203ENST00000317516 PRO0461Q9UI25 63 aa8.37□□□□□ -1.07
TPM1-203ENST00000317516 C4orf26Q17RF5 130 aa8.35□□□□□ -1.07
TPM1-203ENST00000317516 KRTAP19-6Q3LI70 58 aa8.34□□□□□ -1.07
TPM1-203ENST00000317516 K7EP34 96 aa8.31□□□□□ -1.08
TPM1-203ENST00000317516 TP53AIP1Q9HCN2 124 aa8.25□□□□□ -1.09
TPM1-203ENST00000317516 GTF2H5Q6ZYL4 71 aa8.24□□□□□ -1.09
TPM1-203ENST00000317516 PCP4L1A6NKN8 68 aa8.22□□□□□ -1.09
TPM1-203ENST00000317516 C5orf47Q569G3 176 aa8.22□□□□□ -1.09
TPM1-203ENST00000317516 F8W1H4 67 aa8.2□□□□□ -1.1
TPM1-203ENST00000317516 C1orf64Q8NEQ6 169 aa8.2□□□□□ -1.1
TPM1-203ENST00000317516 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
TPM1-203ENST00000317516 S4R3F8 94 aa8.19□□□□□ -1.1
TPM1-203ENST00000317516 FAM236AA0A1B0GUQ0 79 aa8.18□□□□□ -1.1
TPM1-203ENST00000317516 FAM236BA0A1B0GV22 79 aa8.18□□□□□ -1.1
TPM1-203ENST00000317516 KRTAP3-1Q9BYR8 98 aa8.18□□□□□ -1.1
TPM1-203ENST00000317516 MACF1Q9UPN3 7388 aaKnown RBP8.17□□□□□ -1.1
TPM1-203ENST00000317516 ETDBQ3ZM63 59 aa8.14□□□□□ -1.11
TPM1-203ENST00000317516 SYNE2Q8WXH0 6885 aaKnown RBP8.11□□□□□ -1.11
TPM1-203ENST00000317516 LCA10Q71F78 164 aa8.11□□□□□ -1.11
TPM1-203ENST00000317516 CYP4F30PQ9H0H9 118 aa8.06□□□□□ -1.12
TPM1-203ENST00000317516 ACYP1P07311 99 aa8.04□□□□□ -1.12
TPM1-203ENST00000317516 TRAV22A0A0B4J277 110 aa8.02□□□□□ -1.13
TPM1-203ENST00000317516 Q5VV11 94 aa8.02□□□□□ -1.13
TPM1-203ENST00000317516 LOC101927531A0A1B0GV80 90 aa8.01□□□□□ -1.13
TPM1-203ENST00000317516 KRTAP6-3Q3LI67 103 aa8.01□□□□□ -1.13
TPM1-203ENST00000317516 SPRR2GQ9BYE4 73 aa8□□□□□ -1.13
TPM1-203ENST00000317516 A6NN06 94 aa7.98□□□□□ -1.13
TPM1-203ENST00000317516 KLKP1Q107X0 134 aa7.98□□□□□ -1.13
TPM1-203ENST00000317516 ATP5EP2Q5VTU8 51 aa7.97□□□□□ -1.13
TPM1-203ENST00000317516 KRTAP19-8Q3LI54 63 aa7.96□□□□□ -1.14
TPM1-203ENST00000317516 FAM240AA0A1B0GVK7 77 aa7.95□□□□□ -1.14
TPM1-203ENST00000317516 MT1BP07438 61 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms