RNA–Protein interactions for RNA: ENST00000316341.7

SLC12A4-201, Transcript of solute carrier family 12 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC12A4, Length 4,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-201ENST00000316341 NOTCH2NLQ7Z3S9 236 aa10.95□□□□□ -0.66
SLC12A4-201ENST00000316341 LINC00304Q8N9R0 145 aa10.95□□□□□ -0.66
SLC12A4-201ENST00000316341 Q5W150 140 aa10.94□□□□□ -0.66
SLC12A4-201ENST00000316341 TENM3Q9P273 2699 aa10.94□□□□□ -0.66
SLC12A4-201ENST00000316341 VWFP04275 2813 aa10.89□□□□□ -0.67
SLC12A4-201ENST00000316341 SPINT4Q6UDR6 99 aa10.88□□□□□ -0.67
SLC12A4-201ENST00000316341 PLAC8Q9NZF1 115 aa10.87□□□□□ -0.67
SLC12A4-201ENST00000316341 Q6ZR54 194 aa10.86□□□□□ -0.67
SLC12A4-201ENST00000316341 TENM1Q9UKZ4 2725 aa10.85□□□□□ -0.67
SLC12A4-201ENST00000316341 LINC01554Q52M75 96 aa10.83□□□□□ -0.68
SLC12A4-201ENST00000316341 A0A0D9SG42 100 aa10.81□□□□□ -0.68
SLC12A4-201ENST00000316341 PDZD2O15018 2839 aa10.8□□□□□ -0.68
SLC12A4-201ENST00000316341 CSAG1Q6PB30 78 aa10.78□□□□□ -0.68
SLC12A4-201ENST00000316341 LINC00483Q53H64 154 aa10.76□□□□□ -0.69
SLC12A4-201ENST00000316341 CSMD2Q7Z408 3487 aa10.76□□□□□ -0.69
SLC12A4-201ENST00000316341 DMAC1Q96GE9 116 aa10.73□□□□□ -0.69
SLC12A4-201ENST00000316341 FBN1P35555 2871 aaKnown RBP10.73□□□□□ -0.69
SLC12A4-201ENST00000316341 A0A1B0GU33 70 aa10.73□□□□□ -0.69
SLC12A4-201ENST00000316341 TENM4Q6N022 2769 aa10.72□□□□□ -0.69
SLC12A4-201ENST00000316341 BSNQ9UPA5 3926 aa10.71□□□□□ -0.69
SLC12A4-201ENST00000316341 A6NN06 94 aa10.7□□□□□ -0.7
SLC12A4-201ENST00000316341 CRIPTQ9P021 101 aa10.69□□□□□ -0.7
SLC12A4-201ENST00000316341 FLG2Q5D862 2391 aaPredicted RBP10.69□□□□□ -0.7
SLC12A4-201ENST00000316341 PKD1L1Q8TDX9 2849 aa10.65□□□□□ -0.7
SLC12A4-201ENST00000316341 ADM2Q7Z4H4 148 aa10.64□□□□□ -0.71
SLC12A4-201ENST00000316341 KRTAP10-2P60368 255 aa10.63□□□□□ -0.71
SLC12A4-201ENST00000316341 NBPF19A0A087WUL8 3843 aa10.6□□□□□ -0.71
SLC12A4-201ENST00000316341 H3BS24 57 aa10.6□□□□□ -0.71
SLC12A4-201ENST00000316341 KRTAP13-1Q8IUC0 172 aa10.6□□□□□ -0.71
SLC12A4-201ENST00000316341 Q6ZRN7 208 aaPredicted RBP10.57□□□□□ -0.72
SLC12A4-201ENST00000316341 KRTAP10-1P60331 282 aa10.54□□□□□ -0.72
SLC12A4-201ENST00000316341 OTOGQ6ZRI0 2925 aa10.52□□□□□ -0.73
SLC12A4-201ENST00000316341 SPATA8Q6RVD6 105 aa10.5□□□□□ -0.73
SLC12A4-201ENST00000316341 VPS13CQ709C8 3753 aa10.43□□□□□ -0.74
SLC12A4-201ENST00000316341 ZFHX3Q15911 3703 aa10.42□□□□□ -0.74
SLC12A4-201ENST00000316341 TENM2Q9NT68 2774 aa10.41□□□□□ -0.74
SLC12A4-201ENST00000316341 TGP01266 2768 aa10.38□□□□□ -0.75
SLC12A4-201ENST00000316341 KRTAP13-2Q52LG2 175 aa10.38□□□□□ -0.75
SLC12A4-201ENST00000316341 SRRM2Q9UQ35 2752 aaKnown RBP10.34□□□□□ -0.75
SLC12A4-201ENST00000316341 H1FX-AS1Q4G0G2 97 aa10.34□□□□□ -0.75
SLC12A4-201ENST00000316341 ASB16-AS1Q495Z4 193 aa10.31□□□□□ -0.76
SLC12A4-201ENST00000316341 TRRAPQ9Y4A5 3859 aa10.3□□□□□ -0.76
SLC12A4-201ENST00000316341 RPL37P61927 97 aaKnown RBP10.23□□□□□ -0.77
SLC12A4-201ENST00000316341 S4R3F8 94 aa10.21□□□□□ -0.78
SLC12A4-201ENST00000316341 ROMO1P60602 79 aa10.19□□□□□ -0.78
SLC12A4-201ENST00000316341 COX6B2Q6YFQ2 88 aa10.16□□□□□ -0.78
SLC12A4-201ENST00000316341 KRTAP25-1Q3LHN0 102 aa10.14□□□□□ -0.79
SLC12A4-201ENST00000316341 Q6ZSA8 131 aa10.13□□□□□ -0.79
SLC12A4-201ENST00000316341 ANK3Q12955 4377 aaKnown RBP10.06□□□□□ -0.8
SLC12A4-201ENST00000316341 FBN3Q75N90 2809 aa10.04□□□□□ -0.8
SLC12A4-201ENST00000316341 J3QL48 77 aa10□□□□□ -0.81
SLC12A4-201ENST00000316341 KRTAP1-4P0C5Y4 121 aa9.95□□□□□ -0.82
SLC12A4-201ENST00000316341 CAMK2N1Q7Z7J9 78 aa9.94□□□□□ -0.82
SLC12A4-201ENST00000316341 R4GN34 69 aa9.94□□□□□ -0.82
SLC12A4-201ENST00000316341 ZNF469Q96JG9 3925 aaPredicted RBP9.93□□□□□ -0.82
SLC12A4-201ENST00000316341 KRTAP13-3Q3SY46 172 aa9.93□□□□□ -0.82
SLC12A4-201ENST00000316341 KRTAP16-1A8MUX0 517 aa9.92□□□□□ -0.82
SLC12A4-201ENST00000316341 H0YAA0 97 aa9.92□□□□□ -0.82
SLC12A4-201ENST00000316341 Q5VSD8 79 aa9.91□□□□□ -0.82
SLC12A4-201ENST00000316341 LUZP6Q538Z0 58 aa9.9□□□□□ -0.82
SLC12A4-201ENST00000316341 A8MUU9 505 aa9.9□□□□□ -0.82
SLC12A4-201ENST00000316341 RPS29P62273 56 aaKnown RBP9.87□□□□□ -0.83
SLC12A4-201ENST00000316341 M0QZ58 72 aa9.87□□□□□ -0.83
SLC12A4-201ENST00000316341 COL7A1Q02388 2944 aa9.87□□□□□ -0.83
SLC12A4-201ENST00000316341 CSMD3Q7Z407 3707 aa9.84□□□□□ -0.83
SLC12A4-201ENST00000316341 C20orf166-AS1Q96NR2 134 aa9.8□□□□□ -0.84
SLC12A4-201ENST00000316341 NDUFAF8A1L188 74 aa9.78□□□□□ -0.84
SLC12A4-201ENST00000316341 MEGF8Q7Z7M0 2845 aa9.77□□□□□ -0.85
SLC12A4-201ENST00000316341 C10orf95Q9H7T3 257 aa9.75□□□□□ -0.85
SLC12A4-201ENST00000316341 AKAP9Q99996 3911 aa9.72□□□□□ -0.85
SLC12A4-201ENST00000316341 SEC61BP60468 96 aaKnown RBP9.54□□□□□ -0.88
SLC12A4-201ENST00000316341 P0C880 135 aa9.49□□□□□ -0.89
SLC12A4-201ENST00000316341 A0A0A0MQY5 61 aa9.49□□□□□ -0.89
SLC12A4-201ENST00000316341 XP32Q5T750 250 aa9.46□□□□□ -0.9
SLC12A4-201ENST00000316341 M0R2T5 61 aa9.44□□□□□ -0.9
SLC12A4-201ENST00000316341 KRTAP3-1Q9BYR8 98 aa9.4□□□□□ -0.9
SLC12A4-201ENST00000316341 HUWE1Q7Z6Z7 4374 aaKnown RBP9.36□□□□□ -0.91
SLC12A4-201ENST00000316341 KRTAP12-2P59991 146 aa9.21□□□□□ -0.94
SLC12A4-201ENST00000316341 TPRXLQ17RH7 258 aa9.21□□□□□ -0.94
SLC12A4-201ENST00000316341 DNAH10Q8IVF4 4471 aa9.19□□□□□ -0.94
SLC12A4-201ENST00000316341 PLAC4Q8WY50 150 aa9.19□□□□□ -0.94
SLC12A4-201ENST00000316341 KRTAP13-4Q3LI77 160 aa9.16□□□□□ -0.94
SLC12A4-201ENST00000316341 KRTAP10-8P60410 259 aa9.15□□□□□ -0.94
SLC12A4-201ENST00000316341 KRTAP10-6P60371 365 aaPredicted RBP9.07□□□□□ -0.96
SLC12A4-201ENST00000316341 KRTAP12-1P59990 96 aa9.03□□□□□ -0.96
SLC12A4-201ENST00000316341 TNP1P09430 55 aa9.02□□□□□ -0.97
SLC12A4-201ENST00000316341 A0A1B0GVY2 172 aa9.01□□□□□ -0.97
SLC12A4-201ENST00000316341 PLECQ15149 4684 aaKnown RBP8.99□□□□□ -0.97
SLC12A4-201ENST00000316341 DNAH9Q9NYC9 4486 aa8.94□□□□□ -0.98
SLC12A4-201ENST00000316341 DNAH1Q9P2D7 4330 aa8.89□□□□□ -0.99
SLC12A4-201ENST00000316341 PP632Q6XCG6 107 aa8.89□□□□□ -0.99
SLC12A4-201ENST00000316341 DNAH11Q96DT5 4516 aa8.88□□□□□ -0.99
SLC12A4-201ENST00000316341 KRTAP3-3Q9BYR6 98 aa8.84□□□□□ -0.99
SLC12A4-201ENST00000316341 KRTAP3-2Q9BYR7 98 aa8.83□□□□□ -1
SLC12A4-201ENST00000316341 KRTAP21-3Q3LHN1 58 aa8.82□□□□□ -1
SLC12A4-201ENST00000316341 DNAH8Q96JB1 4490 aa8.69□□□□□ -1.02
SLC12A4-201ENST00000316341 DNAH5Q8TE73 4624 aa8.68□□□□□ -1.02
SLC12A4-201ENST00000316341 ANK2Q01484 3957 aa8.68□□□□□ -1.02
SLC12A4-201ENST00000316341 STARD9Q9P2P6 4700 aa8.66□□□□□ -1.02
SLC12A4-201ENST00000316341 KRTAP15-1Q3LI76 137 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms