RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 ASB16-AS1Q495Z4 193 aa8.65□□□□□ -1.03
CLK4-201ENST00000316308 A0A1B0GVX0 72 aa8.64□□□□□ -1.03
CLK4-201ENST00000316308 KRTAP13-2Q52LG2 175 aa8.63□□□□□ -1.03
CLK4-201ENST00000316308 NDUFS5O43920 106 aa8.62□□□□□ -1.03
CLK4-201ENST00000316308 Q6ZSA8 131 aa8.62□□□□□ -1.03
CLK4-201ENST00000316308 FAT1Q14517 4588 aa8.6□□□□□ -1.03
CLK4-201ENST00000316308 PCOTHQ58A44 107 aa8.6□□□□□ -1.03
CLK4-201ENST00000316308 DYNC1H1Q14204 4646 aaKnown RBP8.59□□□□□ -1.03
CLK4-201ENST00000316308 LINC00336Q6ZUF6 198 aa8.58□□□□□ -1.04
CLK4-201ENST00000316308 CDK2AP2O75956 126 aa8.56□□□□□ -1.04
CLK4-201ENST00000316308 MRPL34Q9BQ48 92 aaKnown RBP8.55□□□□□ -1.04
CLK4-201ENST00000316308 Q5W150 140 aa8.55□□□□□ -1.04
CLK4-201ENST00000316308 CYP4F30PQ9H0H9 118 aa8.55□□□□□ -1.04
CLK4-201ENST00000316308 KRTAP1-4P0C5Y4 121 aa8.54□□□□□ -1.04
CLK4-201ENST00000316308 KMT2CQ8NEZ4 4911 aaKnown RBP8.53□□□□□ -1.04
CLK4-201ENST00000316308 CD164Q04900 197 aa8.53□□□□□ -1.04
CLK4-201ENST00000316308 SSBP3-AS1Q7Z2R9 100 aa8.5□□□□□ -1.05
CLK4-201ENST00000316308 H3BPC8 53 aa8.49□□□□□ -1.05
CLK4-201ENST00000316308 RETNLBQ9BQ08 111 aa8.48□□□□□ -1.05
CLK4-201ENST00000316308 C1orf195Q5TG92 126 aa8.47□□□□□ -1.05
CLK4-201ENST00000316308 TP53AIP1Q9HCN2 124 aa8.47□□□□□ -1.05
CLK4-201ENST00000316308 APOBP04114 4563 aaKnown RBP8.47□□□□□ -1.05
CLK4-201ENST00000316308 SMR3BP02814 79 aaPredicted RBP8.47□□□□□ -1.05
CLK4-201ENST00000316308 PSPHP1O15172 72 aa8.46□□□□□ -1.05
CLK4-201ENST00000316308 SPANXA2-OT1Q8N9U9 137 aa8.45□□□□□ -1.06
CLK4-201ENST00000316308 KRTAP13-3Q3SY46 172 aa8.44□□□□□ -1.06
CLK4-201ENST00000316308 RYR2Q92736 4967 aa8.44□□□□□ -1.06
CLK4-201ENST00000316308 PLA2G1BP04054 148 aaKnown RBP8.43□□□□□ -1.06
CLK4-201ENST00000316308 IGLV7-46A0A075B6I9 117 aa8.43□□□□□ -1.06
CLK4-201ENST00000316308 Q8N9P0 234 aaPredicted RBP8.43□□□□□ -1.06
CLK4-201ENST00000316308 BRK1Q8WUW1 75 aa8.4□□□□□ -1.07
CLK4-201ENST00000316308 Q1T7F1 81 aa8.39□□□□□ -1.07
CLK4-201ENST00000316308 KRTAP21-3Q3LHN1 58 aa8.39□□□□□ -1.07
CLK4-201ENST00000316308 COA5Q86WW8 74 aa8.39□□□□□ -1.07
CLK4-201ENST00000316308 LINC00313P59037 77 aa8.39□□□□□ -1.07
CLK4-201ENST00000316308 A8MUN3 132 aa8.38□□□□□ -1.07
CLK4-201ENST00000316308 PRR26Q8N8Z3 221 aa8.38□□□□□ -1.07
CLK4-201ENST00000316308 TYMSOSQ8TAI1 123 aa8.35□□□□□ -1.07
CLK4-201ENST00000316308 KRTAP16-1A8MUX0 517 aa8.35□□□□□ -1.07
CLK4-201ENST00000316308 A8MU10 97 aa8.34□□□□□ -1.07
CLK4-201ENST00000316308 HRES1P13985 223 aa8.33□□□□□ -1.08
CLK4-201ENST00000316308 C8orf87E5RJ46 101 aa8.31□□□□□ -1.08
CLK4-201ENST00000316308 PKHD1L1Q86WI1 4243 aa8.31□□□□□ -1.08
CLK4-201ENST00000316308 PRO0628Q9UI54 55 aa8.3□□□□□ -1.08
CLK4-201ENST00000316308 LRP1Q07954 4544 aaKnown RBP8.3□□□□□ -1.08
CLK4-201ENST00000316308 A0A1B0GVY2 172 aa8.29□□□□□ -1.08
CLK4-201ENST00000316308 Q5VV11 94 aa8.29□□□□□ -1.08
CLK4-201ENST00000316308 LOC101927531A0A1B0GV80 90 aa8.28□□□□□ -1.08
CLK4-201ENST00000316308 SPAG11AQ6PDA7 123 aa8.27□□□□□ -1.08
CLK4-201ENST00000316308 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
CLK4-201ENST00000316308 RYR3Q15413 4870 aa8.26□□□□□ -1.09
CLK4-201ENST00000316308 KRTAP10-4P60372 401 aaPredicted RBP8.25□□□□□ -1.09
CLK4-201ENST00000316308 PRR15LQ9BU68 103 aa8.25□□□□□ -1.09
CLK4-201ENST00000316308 LIMD2Q9BT23 127 aa8.25□□□□□ -1.09
CLK4-201ENST00000316308 LINC00304Q8N9R0 145 aa8.22□□□□□ -1.09
CLK4-201ENST00000316308 FAM229AH3BQW9 127 aa8.22□□□□□ -1.09
CLK4-201ENST00000316308 SPINK1P00995 79 aa8.22□□□□□ -1.09
CLK4-201ENST00000316308 IGKV2D-30A0A075B6S6 120 aa8.21□□□□□ -1.1
CLK4-201ENST00000316308 IGKV2-30P06310 120 aa8.21□□□□□ -1.1
CLK4-201ENST00000316308 HSPG2P98160 4391 aa8.18□□□□□ -1.1
CLK4-201ENST00000316308 CHKB-CPT1BH3BT56 60 aa8.17□□□□□ -1.1
CLK4-201ENST00000316308 C9orf92A6NGG3 77 aa8.17□□□□□ -1.1
CLK4-201ENST00000316308 V9GYY9 64 aa8.16□□□□□ -1.1
CLK4-201ENST00000316308 TNXBP22105 4242 aa8.14□□□□□ -1.11
CLK4-201ENST00000316308 MYCBP2O75592 4640 aa8.14□□□□□ -1.11
CLK4-201ENST00000316308 DMAC1Q96GE9 116 aa8.13□□□□□ -1.11
CLK4-201ENST00000316308 FLG2Q5D862 2391 aaPredicted RBP8.12□□□□□ -1.11
CLK4-201ENST00000316308 LINC01558Q9Y6Z2 57 aa8.1□□□□□ -1.11
CLK4-201ENST00000316308 LCA10Q71F78 164 aa8.1□□□□□ -1.11
CLK4-201ENST00000316308 ACYP2P14621 99 aa8.09□□□□□ -1.11
CLK4-201ENST00000316308 KRTAP17-1Q9BYP8 105 aa8.09□□□□□ -1.12
CLK4-201ENST00000316308 FAT3Q8TDW7 4589 aa8.08□□□□□ -1.12
CLK4-201ENST00000316308 Q75L30 129 aa8.08□□□□□ -1.12
CLK4-201ENST00000316308 SPINK7P58062 85 aa8.07□□□□□ -1.12
CLK4-201ENST00000316308 KIAA1109Q2LD37 5005 aa8.06□□□□□ -1.12
CLK4-201ENST00000316308 DMBT1Q9UGM3 2413 aaPredicted RBP8.06□□□□□ -1.12
CLK4-201ENST00000316308 A6NED7 52 aa8.06□□□□□ -1.12
CLK4-201ENST00000316308 Q8N1X5 172 aa8.05□□□□□ -1.12
CLK4-201ENST00000316308 RPS29P62273 56 aaKnown RBP8.03□□□□□ -1.12
CLK4-201ENST00000316308 RYR1P21817 5038 aa8.03□□□□□ -1.12
CLK4-201ENST00000316308 C7orf65Q6ZTY9 151 aa8.01□□□□□ -1.13
CLK4-201ENST00000316308 SPTSSBQ8NFR3 76 aa7.98□□□□□ -1.13
CLK4-201ENST00000316308 EPPK1P58107 5090 aaKnown RBP7.97□□□□□ -1.13
CLK4-201ENST00000316308 A8MUU9 505 aa7.95□□□□□ -1.14
CLK4-201ENST00000316308 C20orf166-AS1Q96NR2 134 aa7.94□□□□□ -1.14
CLK4-201ENST00000316308 Q5VSD8 79 aa7.92□□□□□ -1.14
CLK4-201ENST00000316308 KRTAP3-1Q9BYR8 98 aa7.91□□□□□ -1.14
CLK4-201ENST00000316308 PMAIP1Q13794 54 aa7.9□□□□□ -1.15
CLK4-201ENST00000316308 CDC42SE1Q9NRR8 79 aa7.9□□□□□ -1.15
CLK4-201ENST00000316308 LPAP08519 4548 aa7.87□□□□□ -1.15
CLK4-201ENST00000316308 A0A1B0GU69 56 aa7.87□□□□□ -1.15
CLK4-201ENST00000316308 KRTAP10-8P60410 259 aa7.86□□□□□ -1.15
CLK4-201ENST00000316308 ATP11AUNQ6ZP68 121 aa7.81□□□□□ -1.16
CLK4-201ENST00000316308 ABCA13Q86UQ4 5058 aa7.79□□□□□ -1.16
CLK4-201ENST00000316308 A6NN06 94 aa7.77□□□□□ -1.16
CLK4-201ENST00000316308 LRP2P98164 4655 aa7.77□□□□□ -1.17
CLK4-201ENST00000316308 MT1HL1P0DM35 61 aa7.72□□□□□ -1.17
CLK4-201ENST00000316308 XP32Q5T750 250 aa7.7□□□□□ -1.18
CLK4-201ENST00000316308 SPATA8Q6RVD6 105 aa7.68□□□□□ -1.18
CLK4-201ENST00000316308 MIR22HGQ0VDD5 57 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 681.7 ms