RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 TEX49A0A1B0GTD5 131 aa4.55□□□□□ -1.68
CDC42-201ENST00000315554 LINC00313P59037 77 aa4.55□□□□□ -1.68
CDC42-201ENST00000315554 Q8N377 158 aa4.55□□□□□ -1.68
CDC42-201ENST00000315554 IGLV5-48A0A075B6I7 105 aa4.54□□□□□ -1.68
CDC42-201ENST00000315554 SMIM26A0A096LP01 95 aa4.54□□□□□ -1.68
CDC42-201ENST00000315554 SMIM29Q86T20 159 aa4.54□□□□□ -1.68
CDC42-201ENST00000315554 CLEC2BQ92478 149 aa4.54□□□□□ -1.68
CDC42-201ENST00000315554 RETNLBQ9BQ08 111 aa4.54□□□□□ -1.68
CDC42-201ENST00000315554 A0A0G2JQZ4 141 aa4.53□□□□□ -1.68
CDC42-201ENST00000315554 H0YGX0 51 aa4.53□□□□□ -1.68
CDC42-201ENST00000315554 LCA10Q71F78 164 aa4.53□□□□□ -1.68
CDC42-201ENST00000315554 TEN1Q86WV5 123 aa4.53□□□□□ -1.68
CDC42-201ENST00000315554 TRBV20-1A0A075B6N2 111 aa4.52□□□□□ -1.69
CDC42-201ENST00000315554 H3BMG7 143 aa4.52□□□□□ -1.69
CDC42-201ENST00000315554 PRR4Q16378 134 aa4.52□□□□□ -1.69
CDC42-201ENST00000315554 SSBP3-AS1Q7Z2R9 100 aa4.52□□□□□ -1.69
CDC42-201ENST00000315554 FABP2P12104 132 aa4.51□□□□□ -1.69
CDC42-201ENST00000315554 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.51□□□□□ -1.69
CDC42-201ENST00000315554 SERP1Q9Y6X1 66 aa4.5□□□□□ -1.69
CDC42-201ENST00000315554 F8WEM9 126 aa4.49□□□□□ -1.69
CDC42-201ENST00000315554 TRACP01848 142 aa4.49□□□□□ -1.69
CDC42-201ENST00000315554 SCGB1C2P0DMR2 95 aa4.49□□□□□ -1.69
CDC42-201ENST00000315554 SPAG11AQ6PDA7 123 aa4.49□□□□□ -1.69
CDC42-201ENST00000315554 H3BT86 120 aa4.49□□□□□ -1.69
CDC42-201ENST00000315554 SNCGO76070 127 aa4.49□□□□□ -1.69
CDC42-201ENST00000315554 COX6CP09669 75 aa4.49□□□□□ -1.69
CDC42-201ENST00000315554 H3BUT2 72 aa4.48□□□□□ -1.69
CDC42-201ENST00000315554 SPINK1P00995 79 aa4.48□□□□□ -1.69
CDC42-201ENST00000315554 DNAL4O96015 105 aa4.47□□□□□ -1.69
CDC42-201ENST00000315554 COX7CP15954 63 aa4.47□□□□□ -1.69
CDC42-201ENST00000315554 TMEM256-PLSCR3K7ERE1 68 aa4.46□□□□□ -1.7
CDC42-201ENST00000315554 SPCS1Q9Y6A9 102 aa4.46□□□□□ -1.7
CDC42-201ENST00000315554 A0A1W2PPM0 123 aa4.45□□□□□ -1.7
CDC42-201ENST00000315554 IGFL1Q6UW32 110 aa4.45□□□□□ -1.7
CDC42-201ENST00000315554 PPDPFLQ8WWR9 84 aa4.45□□□□□ -1.7
CDC42-201ENST00000315554 ORMDL1Q9P0S3 153 aa4.45□□□□□ -1.7
CDC42-201ENST00000315554 IGLV7-46A0A075B6I9 117 aa4.44□□□□□ -1.7
CDC42-201ENST00000315554 TCL1BO95988 128 aa4.44□□□□□ -1.7
CDC42-201ENST00000315554 FP248Q71RG6 208 aaPredicted RBP4.44□□□□□ -1.7
CDC42-201ENST00000315554 LRP2P98164 4655 aa4.44□□□□□ -1.7
CDC42-201ENST00000315554 IGLV8-61A0A075B6I0 122 aa4.43□□□□□ -1.7
CDC42-201ENST00000315554 TRBV7-7A0A0K0K1E9 115 aa4.43□□□□□ -1.7
CDC42-201ENST00000315554 RPS29P62273 56 aaKnown RBP4.43□□□□□ -1.7
CDC42-201ENST00000315554 Q6JHZ5 121 aa4.43□□□□□ -1.7
CDC42-201ENST00000315554 DSCR8Q96T75 97 aa4.43□□□□□ -1.7
CDC42-201ENST00000315554 OCR1Q9BZK8 76 aa4.43□□□□□ -1.7
CDC42-201ENST00000315554 LPAP08519 4548 aa4.42□□□□□ -1.7
CDC42-201ENST00000315554 ATXN8Q156A1 80 aa4.42□□□□□ -1.7
CDC42-201ENST00000315554 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
CDC42-201ENST00000315554 LIMD2Q9BT23 127 aa4.42□□□□□ -1.7
CDC42-201ENST00000315554 PRO0461Q9UI25 63 aa4.41□□□□□ -1.7
CDC42-201ENST00000315554 UBR4Q5T4S7 5183 aa4.41□□□□□ -1.7
CDC42-201ENST00000315554 BAALC-AS2P0C853 105 aa4.4□□□□□ -1.71
CDC42-201ENST00000315554 ETDBQ3ZM63 59 aa4.39□□□□□ -1.71
CDC42-201ENST00000315554 LINC01554Q52M75 96 aa4.39□□□□□ -1.71
CDC42-201ENST00000315554 H3BQ85 93 aa4.38□□□□□ -1.71
CDC42-201ENST00000315554 CXCL6P80162 114 aa4.38□□□□□ -1.71
CDC42-201ENST00000315554 A0A1W2PNM2 257 aa4.37□□□□□ -1.71
CDC42-201ENST00000315554 TPRXLQ17RH7 258 aa4.37□□□□□ -1.71
CDC42-201ENST00000315554 KRTAP13-3Q3SY46 172 aa4.37□□□□□ -1.71
CDC42-201ENST00000315554 C7orf65Q6ZTY9 151 aa4.37□□□□□ -1.71
CDC42-201ENST00000315554 A0A087WSZ3 146 aa4.37□□□□□ -1.71
CDC42-201ENST00000315554 A0A1B0GW54 56 aa4.37□□□□□ -1.71
CDC42-201ENST00000315554 C9orf92A6NGG3 77 aa4.36□□□□□ -1.71
CDC42-201ENST00000315554 CCKP06307 115 aa4.35□□□□□ -1.71
CDC42-201ENST00000315554 RBM3P98179 157 aaKnown RBP4.35□□□□□ -1.71
CDC42-201ENST00000315554 TRBV7-4A0A0J9YYF1 115 aa4.34□□□□□ -1.71
CDC42-201ENST00000315554 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
CDC42-201ENST00000315554 ATOX1O00244 68 aa4.33□□□□□ -1.72
CDC42-201ENST00000315554 ATP5EP56381 51 aaPredicted RBP4.32□□□□□ -1.72
CDC42-201ENST00000315554 HIST1H4AP62805 103 aaKnown RBP4.32□□□□□ -1.72
CDC42-201ENST00000315554 ASB16-AS1Q495Z4 193 aa4.32□□□□□ -1.72
CDC42-201ENST00000315554 C14orf132Q9NPU4 83 aa4.32□□□□□ -1.72
CDC42-201ENST00000315554 A6NN06 94 aa4.3□□□□□ -1.72
CDC42-201ENST00000315554 JMJD7-PLA2G4BH0Y9G9 81 aa4.3□□□□□ -1.72
CDC42-201ENST00000315554 DEFB116Q30KQ4 102 aa4.3□□□□□ -1.72
CDC42-201ENST00000315554 Q96NJ1 140 aa4.3□□□□□ -1.72
CDC42-201ENST00000315554 RNF213Q63HN8 5207 aa4.3□□□□□ -1.72
CDC42-201ENST00000315554 Q6ZQT0 140 aa4.3□□□□□ -1.72
CDC42-201ENST00000315554 OBSCN-AS1Q96MR7 158 aa4.29□□□□□ -1.72
CDC42-201ENST00000315554 LOC110117498A0A087WWA1 95 aa4.28□□□□□ -1.72
CDC42-201ENST00000315554 KRTAP16-1A8MUX0 517 aa4.28□□□□□ -1.72
CDC42-201ENST00000315554 IGKV4-1P06312 121 aa4.27□□□□□ -1.73
CDC42-201ENST00000315554 ATP11AUNQ6ZP68 121 aa4.27□□□□□ -1.73
CDC42-201ENST00000315554 SERP2Q8N6R1 65 aa4.27□□□□□ -1.73
CDC42-201ENST00000315554 CYSTM1Q9H1C7 97 aa4.27□□□□□ -1.73
CDC42-201ENST00000315554 LINC00472Q9H8W2 130 aa4.26□□□□□ -1.73
CDC42-201ENST00000315554 DSCR10P59022 87 aa4.25□□□□□ -1.73
CDC42-201ENST00000315554 CAMK2N1Q7Z7J9 78 aa4.25□□□□□ -1.73
CDC42-201ENST00000315554 PDE6GP18545 87 aa4.24□□□□□ -1.73
CDC42-201ENST00000315554 PCOTHQ58A44 107 aa4.24□□□□□ -1.73
CDC42-201ENST00000315554 KRTAP4-1Q9BYQ7 146 aa4.24□□□□□ -1.73
CDC42-201ENST00000315554 MUC17Q685J3 4493 aa4.23□□□□□ -1.73
CDC42-201ENST00000315554 RPL37P61927 97 aaKnown RBP4.22□□□□□ -1.73
CDC42-201ENST00000315554 Q1T7F1 81 aa4.22□□□□□ -1.73
CDC42-201ENST00000315554 NREPQ16612 68 aa4.21□□□□□ -1.74
CDC42-201ENST00000315554 MUC2Q02817 5179 aa4.19□□□□□ -1.74
CDC42-201ENST00000315554 A0A1B0GVX0 72 aa4.19□□□□□ -1.74
CDC42-201ENST00000315554 K7ERS5 55 aa4.18□□□□□ -1.74
CDC42-201ENST00000315554 ACYP1P07311 99 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms