RNA–Protein interactions for RNA: ENST00000314138.10

RPL27A-201, Transcript of ribosomal protein L27a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL27A, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL27A-201ENST00000314138 NDUFAF8A1L188 74 aa7.17□□□□□ -1.26
RPL27A-201ENST00000314138 COL12A1Q99715 3063 aa7.16□□□□□ -1.26
RPL27A-201ENST00000314138 A0A087X002 238 aa7.16□□□□□ -1.26
RPL27A-201ENST00000314138 ITPR1Q14643 2758 aa7.16□□□□□ -1.26
RPL27A-201ENST00000314138 DMDP11532 3685 aa7.13□□□□□ -1.27
RPL27A-201ENST00000314138 WDFY3Q8IZQ1 3526 aa7.1□□□□□ -1.27
RPL27A-201ENST00000314138 LINC00483Q53H64 154 aa7.1□□□□□ -1.27
RPL27A-201ENST00000314138 NOTCH2NLQ7Z3S9 236 aa7.09□□□□□ -1.27
RPL27A-201ENST00000314138 KALRNO60229 2985 aa7.09□□□□□ -1.28
RPL27A-201ENST00000314138 ASPMQ8IZT6 3477 aa7.08□□□□□ -1.28
RPL27A-201ENST00000314138 CAMK2N1Q7Z7J9 78 aa7.07□□□□□ -1.28
RPL27A-201ENST00000314138 UTP20O75691 2785 aaKnown RBP7.06□□□□□ -1.28
RPL27A-201ENST00000314138 LAMA5O15230 3695 aa7.05□□□□□ -1.28
RPL27A-201ENST00000314138 PANO1I0J062 215 aa7.05□□□□□ -1.28
RPL27A-201ENST00000314138 DCHS1Q96JQ0 3298 aa7.04□□□□□ -1.28
RPL27A-201ENST00000314138 TACC2O95359 2948 aa7.04□□□□□ -1.28
RPL27A-201ENST00000314138 A8MUU9 505 aa7.02□□□□□ -1.29
RPL27A-201ENST00000314138 S4R3F8 94 aa7.01□□□□□ -1.29
RPL27A-201ENST00000314138 LRBAP50851 2863 aa7□□□□□ -1.29
RPL27A-201ENST00000314138 Q6ZRN7 208 aaPredicted RBP6.98□□□□□ -1.29
RPL27A-201ENST00000314138 ASH1LQ9NR48 2969 aaKnown RBP6.97□□□□□ -1.29
RPL27A-201ENST00000314138 KRTAP11-1Q8IUC1 163 aa6.95□□□□□ -1.3
RPL27A-201ENST00000314138 RELNP78509 3460 aa6.94□□□□□ -1.3
RPL27A-201ENST00000314138 APCP25054 2843 aa6.94□□□□□ -1.3
RPL27A-201ENST00000314138 R4GN34 69 aa6.93□□□□□ -1.3
RPL27A-201ENST00000314138 KRTAP7-1Q8IUC3 87 aa6.92□□□□□ -1.3
RPL27A-201ENST00000314138 RPS29P62273 56 aaKnown RBP6.91□□□□□ -1.3
RPL27A-201ENST00000314138 C20orf166-AS1Q96NR2 134 aa6.9□□□□□ -1.3
RPL27A-201ENST00000314138 NIPBLQ6KC79 2804 aaeCLIP6.89□□□□□ -1.31
RPL27A-201ENST00000314138 CRYBG3Q68DQ2 2970 aa6.85□□□□□ -1.31
RPL27A-201ENST00000314138 ZFHX4Q86UP3 3567 aa6.85□□□□□ -1.31
RPL27A-201ENST00000314138 PLAC4Q8WY50 150 aa6.85□□□□□ -1.31
RPL27A-201ENST00000314138 ZANQ9Y493 2812 aa6.82□□□□□ -1.32
RPL27A-201ENST00000314138 M0QZ58 72 aa6.82□□□□□ -1.32
RPL27A-201ENST00000314138 TENM3Q9P273 2699 aa6.76□□□□□ -1.33
RPL27A-201ENST00000314138 KRTAP13-1Q8IUC0 172 aa6.74□□□□□ -1.33
RPL27A-201ENST00000314138 DCHS2Q6V1P9 2916 aa6.73□□□□□ -1.33
RPL27A-201ENST00000314138 TENM2Q9NT68 2774 aa6.73□□□□□ -1.33
RPL27A-201ENST00000314138 CELSR2Q9HCU4 2923 aa6.73□□□□□ -1.33
RPL27A-201ENST00000314138 C10orf95Q9H7T3 257 aa6.71□□□□□ -1.34
RPL27A-201ENST00000314138 H0YAA0 97 aa6.71□□□□□ -1.34
RPL27A-201ENST00000314138 SMG1Q96Q15 3661 aaKnown RBP6.7□□□□□ -1.34
RPL27A-201ENST00000314138 NF1P21359 2839 aa6.67□□□□□ -1.34
RPL27A-201ENST00000314138 TENM1Q9UKZ4 2725 aa6.67□□□□□ -1.34
RPL27A-201ENST00000314138 HRNRQ86YZ3 2850 aaPredicted RBP6.66□□□□□ -1.34
RPL27A-201ENST00000314138 KRTAP13-2Q52LG2 175 aa6.6□□□□□ -1.35
RPL27A-201ENST00000314138 FBN2P35556 2912 aa6.6□□□□□ -1.35
RPL27A-201ENST00000314138 P0C880 135 aa6.58□□□□□ -1.36
RPL27A-201ENST00000314138 TPRXLQ17RH7 258 aa6.56□□□□□ -1.36
RPL27A-201ENST00000314138 MXRA5Q9NR99 2828 aa6.55□□□□□ -1.36
RPL27A-201ENST00000314138 A0A1B0GVY2 172 aa6.52□□□□□ -1.37
RPL27A-201ENST00000314138 SVEP1Q4LDE5 3571 aa6.5□□□□□ -1.37
RPL27A-201ENST00000314138 CELSR1Q9NYQ6 3014 aa6.48□□□□□ -1.37
RPL27A-201ENST00000314138 CSMD1Q96PZ7 3565 aa6.46□□□□□ -1.38
RPL27A-201ENST00000314138 PKD1L1Q8TDX9 2849 aa6.46□□□□□ -1.38
RPL27A-201ENST00000314138 SPENQ96T58 3664 aaKnown RBP6.44□□□□□ -1.38
RPL27A-201ENST00000314138 PP632Q6XCG6 107 aa6.43□□□□□ -1.38
RPL27A-201ENST00000314138 CUBNO60494 3623 aa6.42□□□□□ -1.38
RPL27A-201ENST00000314138 XP32Q5T750 250 aa6.41□□□□□ -1.38
RPL27A-201ENST00000314138 KRTAP13-3Q3SY46 172 aa6.4□□□□□ -1.38
RPL27A-201ENST00000314138 KRTAP1-4P0C5Y4 121 aa6.39□□□□□ -1.39
RPL27A-201ENST00000314138 TGP01266 2768 aa6.38□□□□□ -1.39
RPL27A-201ENST00000314138 TNP1P09430 55 aa6.38□□□□□ -1.39
RPL27A-201ENST00000314138 KRTAP10-8P60410 259 aa6.37□□□□□ -1.39
RPL27A-201ENST00000314138 KRTAP10-10P60014 251 aa6.36□□□□□ -1.39
RPL27A-201ENST00000314138 CSMD2Q7Z408 3487 aa6.35□□□□□ -1.39
RPL27A-201ENST00000314138 NBPF19A0A087WUL8 3843 aa6.35□□□□□ -1.39
RPL27A-201ENST00000314138 ZFHX3Q15911 3703 aa6.34□□□□□ -1.39
RPL27A-201ENST00000314138 OTOGQ6ZRI0 2925 aa6.29□□□□□ -1.4
RPL27A-201ENST00000314138 BSNQ9UPA5 3926 aa6.28□□□□□ -1.4
RPL27A-201ENST00000314138 PRO2289Q9P1D8 64 aa6.28□□□□□ -1.4
RPL27A-201ENST00000314138 PDZD2O15018 2839 aa6.23□□□□□ -1.41
RPL27A-201ENST00000314138 FBN1P35555 2871 aaKnown RBP6.23□□□□□ -1.41
RPL27A-201ENST00000314138 FBN3Q75N90 2809 aa6.21□□□□□ -1.41
RPL27A-201ENST00000314138 VWFP04275 2813 aa6.19□□□□□ -1.42
RPL27A-201ENST00000314138 KRTAP12-2P59991 146 aa6.15□□□□□ -1.42
RPL27A-201ENST00000314138 SRRM2Q9UQ35 2752 aaKnown RBP6.09□□□□□ -1.43
RPL27A-201ENST00000314138 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
RPL27A-201ENST00000314138 VPS13CQ709C8 3753 aa6.05□□□□□ -1.44
RPL27A-201ENST00000314138 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
RPL27A-201ENST00000314138 KRTAP3-1Q9BYR8 98 aa6□□□□□ -1.45
RPL27A-201ENST00000314138 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
RPL27A-201ENST00000314138 TRRAPQ9Y4A5 3859 aa5.95□□□□□ -1.46
RPL27A-201ENST00000314138 KRTAP10-6P60371 365 aaPredicted RBP5.91□□□□□ -1.46
RPL27A-201ENST00000314138 ZNF469Q96JG9 3925 aaPredicted RBP5.89□□□□□ -1.47
RPL27A-201ENST00000314138 MT1HL1P0DM35 61 aa5.84□□□□□ -1.47
RPL27A-201ENST00000314138 ANK3Q12955 4377 aaKnown RBP5.81□□□□□ -1.48
RPL27A-201ENST00000314138 KRTAP4-5Q9BYR2 181 aa5.8□□□□□ -1.48
RPL27A-201ENST00000314138 INE1O15225 51 aa5.75□□□□□ -1.49
RPL27A-201ENST00000314138 MEGF8Q7Z7M0 2845 aa5.7□□□□□ -1.5
RPL27A-201ENST00000314138 KRTAP3-2Q9BYR7 98 aa5.68□□□□□ -1.5
RPL27A-201ENST00000314138 COL7A1Q02388 2944 aa5.63□□□□□ -1.51
RPL27A-201ENST00000314138 KRTAP3-3Q9BYR6 98 aa5.6□□□□□ -1.51
RPL27A-201ENST00000314138 AKAP9Q99996 3911 aa5.6□□□□□ -1.51
RPL27A-201ENST00000314138 KRTAP10-4P60372 401 aaPredicted RBP5.55□□□□□ -1.52
RPL27A-201ENST00000314138 CSMD3Q7Z407 3707 aa5.46□□□□□ -1.54
RPL27A-201ENST00000314138 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
RPL27A-201ENST00000314138 DNHD1Q96M86 4753 aa5.29□□□□□ -1.56
RPL27A-201ENST00000314138 HUWE1Q7Z6Z7 4374 aaKnown RBP5.29□□□□□ -1.56
RPL27A-201ENST00000314138 ALMS1Q8TCU4 4167 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms