RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 CSAG1Q6PB30 78 aa8.26□□□□□ -1.09
ZNF541-202ENST00000314121 FLG2Q5D862 2391 aaPredicted RBP8.26□□□□□ -1.09
ZNF541-202ENST00000314121 DMAC1Q96GE9 116 aa8.26□□□□□ -1.09
ZNF541-202ENST00000314121 KRTAP7-1Q8IUC3 87 aa8.25□□□□□ -1.09
ZNF541-202ENST00000314121 MXRA5Q9NR99 2828 aa8.24□□□□□ -1.09
ZNF541-202ENST00000314121 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
ZNF541-202ENST00000314121 A8MU10 97 aa8.17□□□□□ -1.1
ZNF541-202ENST00000314121 TENM4Q6N022 2769 aa8.15□□□□□ -1.1
ZNF541-202ENST00000314121 A0A087X002 238 aa8.15□□□□□ -1.1
ZNF541-202ENST00000314121 NOTCH2NLQ7Z3S9 236 aa8.15□□□□□ -1.1
ZNF541-202ENST00000314121 COX6B2Q6YFQ2 88 aa8.13□□□□□ -1.11
ZNF541-202ENST00000314121 J3QL48 77 aa8.12□□□□□ -1.11
ZNF541-202ENST00000314121 KRTAP10-2P60368 255 aa8.12□□□□□ -1.11
ZNF541-202ENST00000314121 KRTAP10-1P60331 282 aa8.12□□□□□ -1.11
ZNF541-202ENST00000314121 A6NN06 94 aa8.11□□□□□ -1.11
ZNF541-202ENST00000314121 CELSR1Q9NYQ6 3014 aa8.1□□□□□ -1.11
ZNF541-202ENST00000314121 Q6ZRN7 208 aaPredicted RBP8.09□□□□□ -1.11
ZNF541-202ENST00000314121 ASB16-AS1Q495Z4 193 aa8.08□□□□□ -1.12
ZNF541-202ENST00000314121 KRTAP13-1Q8IUC0 172 aa8.07□□□□□ -1.12
ZNF541-202ENST00000314121 Q6ZSA8 131 aa8.07□□□□□ -1.12
ZNF541-202ENST00000314121 SMG1Q96Q15 3661 aaKnown RBP8.04□□□□□ -1.12
ZNF541-202ENST00000314121 SPATA8Q6RVD6 105 aa8.04□□□□□ -1.12
ZNF541-202ENST00000314121 CSMD1Q96PZ7 3565 aa8.03□□□□□ -1.12
ZNF541-202ENST00000314121 S4R3F8 94 aa8□□□□□ -1.13
ZNF541-202ENST00000314121 ADM2Q7Z4H4 148 aa7.99□□□□□ -1.13
ZNF541-202ENST00000314121 RPL37P61927 97 aaKnown RBP7.98□□□□□ -1.13
ZNF541-202ENST00000314121 H1FX-AS1Q4G0G2 97 aa7.98□□□□□ -1.13
ZNF541-202ENST00000314121 CUBNO60494 3623 aa7.96□□□□□ -1.13
ZNF541-202ENST00000314121 SVEP1Q4LDE5 3571 aa7.93□□□□□ -1.14
ZNF541-202ENST00000314121 LUZP6Q538Z0 58 aa7.92□□□□□ -1.14
ZNF541-202ENST00000314121 ROMO1P60602 79 aa7.9□□□□□ -1.14
ZNF541-202ENST00000314121 CAMK2N1Q7Z7J9 78 aa7.89□□□□□ -1.15
ZNF541-202ENST00000314121 KRTAP13-2Q52LG2 175 aa7.89□□□□□ -1.15
ZNF541-202ENST00000314121 TENM3Q9P273 2699 aa7.87□□□□□ -1.15
ZNF541-202ENST00000314121 RPS29P62273 56 aaKnown RBP7.87□□□□□ -1.15
ZNF541-202ENST00000314121 TENM1Q9UKZ4 2725 aa7.87□□□□□ -1.15
ZNF541-202ENST00000314121 FBN1P35555 2871 aaKnown RBP7.85□□□□□ -1.15
ZNF541-202ENST00000314121 R4GN34 69 aa7.83□□□□□ -1.16
ZNF541-202ENST00000314121 VWFP04275 2813 aa7.8□□□□□ -1.16
ZNF541-202ENST00000314121 Q5VSD8 79 aa7.8□□□□□ -1.16
ZNF541-202ENST00000314121 PKD1L1Q8TDX9 2849 aa7.78□□□□□ -1.16
ZNF541-202ENST00000314121 KRTAP25-1Q3LHN0 102 aa7.77□□□□□ -1.17
ZNF541-202ENST00000314121 PDZD2O15018 2839 aa7.76□□□□□ -1.17
ZNF541-202ENST00000314121 OTOGQ6ZRI0 2925 aa7.75□□□□□ -1.17
ZNF541-202ENST00000314121 SEC61BP60468 96 aaKnown RBP7.73□□□□□ -1.17
ZNF541-202ENST00000314121 A0A0A0MQY5 61 aa7.7□□□□□ -1.18
ZNF541-202ENST00000314121 M0QZ58 72 aa7.7□□□□□ -1.18
ZNF541-202ENST00000314121 CSMD2Q7Z408 3487 aa7.69□□□□□ -1.18
ZNF541-202ENST00000314121 ZFHX3Q15911 3703 aa7.67□□□□□ -1.18
ZNF541-202ENST00000314121 SPENQ96T58 3664 aaKnown RBP7.66□□□□□ -1.18
ZNF541-202ENST00000314121 KRTAP16-1A8MUX0 517 aa7.66□□□□□ -1.18
ZNF541-202ENST00000314121 NBPF19A0A087WUL8 3843 aa7.66□□□□□ -1.18
ZNF541-202ENST00000314121 A8MUU9 505 aa7.63□□□□□ -1.19
ZNF541-202ENST00000314121 NDUFAF8A1L188 74 aa7.61□□□□□ -1.19
ZNF541-202ENST00000314121 C20orf166-AS1Q96NR2 134 aa7.61□□□□□ -1.19
ZNF541-202ENST00000314121 TGP01266 2768 aa7.6□□□□□ -1.19
ZNF541-202ENST00000314121 KRTAP1-4P0C5Y4 121 aa7.58□□□□□ -1.2
ZNF541-202ENST00000314121 M0R2T5 61 aa7.57□□□□□ -1.2
ZNF541-202ENST00000314121 TENM2Q9NT68 2774 aa7.55□□□□□ -1.2
ZNF541-202ENST00000314121 KRTAP13-3Q3SY46 172 aa7.43□□□□□ -1.22
ZNF541-202ENST00000314121 H0YAA0 97 aa7.42□□□□□ -1.22
ZNF541-202ENST00000314121 BSNQ9UPA5 3926 aa7.41□□□□□ -1.22
ZNF541-202ENST00000314121 SRRM2Q9UQ35 2752 aaKnown RBP7.4□□□□□ -1.23
ZNF541-202ENST00000314121 PLAC4Q8WY50 150 aa7.31□□□□□ -1.24
ZNF541-202ENST00000314121 TRRAPQ9Y4A5 3859 aa7.31□□□□□ -1.24
ZNF541-202ENST00000314121 KRTAP21-3Q3LHN1 58 aa7.31□□□□□ -1.24
ZNF541-202ENST00000314121 XP32Q5T750 250 aa7.3□□□□□ -1.24
ZNF541-202ENST00000314121 C10orf95Q9H7T3 257 aa7.29□□□□□ -1.24
ZNF541-202ENST00000314121 FBN3Q75N90 2809 aa7.22□□□□□ -1.25
ZNF541-202ENST00000314121 TNP1P09430 55 aa7.16□□□□□ -1.26
ZNF541-202ENST00000314121 P0C880 135 aa7.15□□□□□ -1.27
ZNF541-202ENST00000314121 VPS13CQ709C8 3753 aa7.13□□□□□ -1.27
ZNF541-202ENST00000314121 ANK3Q12955 4377 aaKnown RBP7.12□□□□□ -1.27
ZNF541-202ENST00000314121 PP632Q6XCG6 107 aa7.12□□□□□ -1.27
ZNF541-202ENST00000314121 TPRXLQ17RH7 258 aa7.1□□□□□ -1.27
ZNF541-202ENST00000314121 COL7A1Q02388 2944 aa7.08□□□□□ -1.28
ZNF541-202ENST00000314121 MEGF8Q7Z7M0 2845 aa7.04□□□□□ -1.28
ZNF541-202ENST00000314121 KRTAP10-8P60410 259 aa7.03□□□□□ -1.28
ZNF541-202ENST00000314121 KRTAP3-1Q9BYR8 98 aa6.98□□□□□ -1.29
ZNF541-202ENST00000314121 ZNF469Q96JG9 3925 aaPredicted RBP6.96□□□□□ -1.29
ZNF541-202ENST00000314121 A0A1B0GVY2 172 aa6.96□□□□□ -1.3
ZNF541-202ENST00000314121 KRTAP12-2P59991 146 aa6.89□□□□□ -1.31
ZNF541-202ENST00000314121 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
ZNF541-202ENST00000314121 CSMD3Q7Z407 3707 aa6.8□□□□□ -1.32
ZNF541-202ENST00000314121 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
ZNF541-202ENST00000314121 KRTAP13-4Q3LI77 160 aa6.75□□□□□ -1.33
ZNF541-202ENST00000314121 KRTAP10-10P60014 251 aa6.67□□□□□ -1.34
ZNF541-202ENST00000314121 HUWE1Q7Z6Z7 4374 aaKnown RBP6.58□□□□□ -1.36
ZNF541-202ENST00000314121 KRTAP3-2Q9BYR7 98 aa6.58□□□□□ -1.36
ZNF541-202ENST00000314121 AKAP9Q99996 3911 aa6.57□□□□□ -1.36
ZNF541-202ENST00000314121 KRTAP3-3Q9BYR6 98 aa6.57□□□□□ -1.36
ZNF541-202ENST00000314121 KRTAP15-1Q3LI76 137 aa6.53□□□□□ -1.36
ZNF541-202ENST00000314121 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
ZNF541-202ENST00000314121 KRTAP10-4P60372 401 aaPredicted RBP6.49□□□□□ -1.37
ZNF541-202ENST00000314121 MT1HL1P0DM35 61 aa6.47□□□□□ -1.37
ZNF541-202ENST00000314121 DNAH9Q9NYC9 4486 aa6.35□□□□□ -1.39
ZNF541-202ENST00000314121 DNHD1Q96M86 4753 aa6.33□□□□□ -1.4
ZNF541-202ENST00000314121 PLECQ15149 4684 aaKnown RBP6.3□□□□□ -1.4
ZNF541-202ENST00000314121 DNAH10Q8IVF4 4471 aa6.27□□□□□ -1.41
ZNF541-202ENST00000314121 DNAH11Q96DT5 4516 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms