RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 LIMD2Q9BT23 127 aa9.96□□□□□ -0.81
SWSAP1-201ENST00000312423 CYSTM1Q9H1C7 97 aa9.96□□□□□ -0.82
SWSAP1-201ENST00000312423 IGFL1Q6UW32 110 aa9.95□□□□□ -0.82
SWSAP1-201ENST00000312423 HMCN2Q8NDA2 5059 aa9.94□□□□□ -0.82
SWSAP1-201ENST00000312423 TRAV7A0A075B6U4 112 aa9.93□□□□□ -0.82
SWSAP1-201ENST00000312423 IGLV7-46A0A075B6I9 117 aa9.91□□□□□ -0.82
SWSAP1-201ENST00000312423 TMEM258P61165 79 aa9.9□□□□□ -0.82
SWSAP1-201ENST00000312423 A0A1W2PNM2 257 aa9.9□□□□□ -0.83
SWSAP1-201ENST00000312423 NREPQ16612 68 aa9.9□□□□□ -0.83
SWSAP1-201ENST00000312423 FP248Q71RG6 208 aaPredicted RBP9.89□□□□□ -0.83
SWSAP1-201ENST00000312423 IGKV4-1P06312 121 aa9.87□□□□□ -0.83
SWSAP1-201ENST00000312423 RPS28P62857 69 aaKnown RBP9.86□□□□□ -0.83
SWSAP1-201ENST00000312423 Q5XG85 94 aa9.83□□□□□ -0.84
SWSAP1-201ENST00000312423 BPY2O14599 106 aa9.83□□□□□ -0.84
SWSAP1-201ENST00000312423 KLKP1Q107X0 134 aa9.82□□□□□ -0.84
SWSAP1-201ENST00000312423 C20orf197Q8N268 126 aa9.82□□□□□ -0.84
SWSAP1-201ENST00000312423 TPRXLQ17RH7 258 aa9.81□□□□□ -0.84
SWSAP1-201ENST00000312423 J3KT08 172 aa9.8□□□□□ -0.84
SWSAP1-201ENST00000312423 Q8N9L7 120 aa9.79□□□□□ -0.84
SWSAP1-201ENST00000312423 C1orf195Q5TG92 126 aa9.78□□□□□ -0.84
SWSAP1-201ENST00000312423 LRP2P98164 4655 aa9.77□□□□□ -0.85
SWSAP1-201ENST00000312423 LPAP08519 4548 aa9.76□□□□□ -0.85
SWSAP1-201ENST00000312423 A0A087WSZ3 146 aa9.76□□□□□ -0.85
SWSAP1-201ENST00000312423 H7BZZ5 65 aa9.76□□□□□ -0.85
SWSAP1-201ENST00000312423 OCR1Q9BZK8 76 aa9.76□□□□□ -0.85
SWSAP1-201ENST00000312423 V9GYY9 64 aa9.76□□□□□ -0.85
SWSAP1-201ENST00000312423 KRTAP13-3Q3SY46 172 aa9.74□□□□□ -0.85
SWSAP1-201ENST00000312423 ASB16-AS1Q495Z4 193 aa9.74□□□□□ -0.85
SWSAP1-201ENST00000312423 DSCR10P59022 87 aa9.73□□□□□ -0.85
SWSAP1-201ENST00000312423 NDUFC1O43677 76 aa9.7□□□□□ -0.86
SWSAP1-201ENST00000312423 FAM236DA0A1B0GTK5 79 aa9.68□□□□□ -0.86
SWSAP1-201ENST00000312423 FAM236CP0DP71 79 aa9.68□□□□□ -0.86
SWSAP1-201ENST00000312423 SNURFQ9Y675 71 aa9.68□□□□□ -0.86
SWSAP1-201ENST00000312423 C9orf92A6NGG3 77 aa9.67□□□□□ -0.86
SWSAP1-201ENST00000312423 TMEM254Q8TBM7 123 aa9.67□□□□□ -0.86
SWSAP1-201ENST00000312423 A0A0U1RQV1 116 aa9.65□□□□□ -0.86
SWSAP1-201ENST00000312423 K7EQZ3 153 aa9.64□□□□□ -0.87
SWSAP1-201ENST00000312423 PRO0628Q9UI54 55 aa9.64□□□□□ -0.87
SWSAP1-201ENST00000312423 UBR4Q5T4S7 5183 aa9.63□□□□□ -0.87
SWSAP1-201ENST00000312423 XP32Q5T750 250 aa9.61□□□□□ -0.87
SWSAP1-201ENST00000312423 SERP1Q9Y6X1 66 aa9.61□□□□□ -0.87
SWSAP1-201ENST00000312423 ATP5EP56381 51 aaPredicted RBP9.6□□□□□ -0.87
SWSAP1-201ENST00000312423 Q96NJ1 140 aa9.6□□□□□ -0.87
SWSAP1-201ENST00000312423 HCG22E2RYF7 251 aa9.58□□□□□ -0.88
SWSAP1-201ENST00000312423 DEFB116Q30KQ4 102 aa9.57□□□□□ -0.88
SWSAP1-201ENST00000312423 LINC00472Q9H8W2 130 aa9.55□□□□□ -0.88
SWSAP1-201ENST00000312423 ZCCHC13Q8WW36 166 aaKnown RBP9.53□□□□□ -0.88
SWSAP1-201ENST00000312423 SEC61BP60468 96 aaKnown RBP9.51□□□□□ -0.89
SWSAP1-201ENST00000312423 A8MWP4 228 aa9.48□□□□□ -0.89
SWSAP1-201ENST00000312423 PRR15Q8IV56 129 aa9.48□□□□□ -0.89
SWSAP1-201ENST00000312423 LCE2DQ5TA82 110 aaPredicted RBP9.46□□□□□ -0.89
SWSAP1-201ENST00000312423 IGHV6-1A0A0B4J1U7 121 aa9.45□□□□□ -0.9
SWSAP1-201ENST00000312423 WFDC13Q8IUB5 93 aa9.44□□□□□ -0.9
SWSAP1-201ENST00000312423 RPL37P61927 97 aaKnown RBP9.43□□□□□ -0.9
SWSAP1-201ENST00000312423 SMIM26A0A096LP01 95 aa9.42□□□□□ -0.9
SWSAP1-201ENST00000312423 LINC00313P59037 77 aa9.42□□□□□ -0.9
SWSAP1-201ENST00000312423 PCOTHQ58A44 107 aa9.42□□□□□ -0.9
SWSAP1-201ENST00000312423 CASC2Q6XLA1 102 aa9.42□□□□□ -0.9
SWSAP1-201ENST00000312423 RNF213Q63HN8 5207 aa9.41□□□□□ -0.9
SWSAP1-201ENST00000312423 A0A1B0GVX0 72 aa9.4□□□□□ -0.9
SWSAP1-201ENST00000312423 NDUFB1O75438 58 aa9.4□□□□□ -0.9
SWSAP1-201ENST00000312423 C4orf26Q17RF5 130 aa9.4□□□□□ -0.9
SWSAP1-201ENST00000312423 MMP24-AS1A0A0U1RRL7 71 aa9.38□□□□□ -0.91
SWSAP1-201ENST00000312423 H3BPC8 53 aa9.37□□□□□ -0.91
SWSAP1-201ENST00000312423 Q75L30 129 aa9.37□□□□□ -0.91
SWSAP1-201ENST00000312423 NOTCH2NLQ7Z3S9 236 aa9.37□□□□□ -0.91
SWSAP1-201ENST00000312423 C8orf87E5RJ46 101 aa9.36□□□□□ -0.91
SWSAP1-201ENST00000312423 MP68P56378 58 aa9.35□□□□□ -0.91
SWSAP1-201ENST00000312423 MUC17Q685J3 4493 aa9.34□□□□□ -0.91
SWSAP1-201ENST00000312423 ATP11AUNQ6ZP68 121 aa9.34□□□□□ -0.91
SWSAP1-201ENST00000312423 C20orf166-AS1Q96NR2 134 aa9.33□□□□□ -0.92
SWSAP1-201ENST00000312423 CYP4F30PQ9H0H9 118 aa9.33□□□□□ -0.92
SWSAP1-201ENST00000312423 KRTAP4-1Q9BYQ7 146 aa9.32□□□□□ -0.92
SWSAP1-201ENST00000312423 TRAV22A0A0B4J277 110 aa9.32□□□□□ -0.92
SWSAP1-201ENST00000312423 A8MUU9 505 aa9.32□□□□□ -0.92
SWSAP1-201ENST00000312423 hDV103S1A0JD37 113 aa9.31□□□□□ -0.92
SWSAP1-201ENST00000312423 KRTAP16-1A8MUX0 517 aa9.31□□□□□ -0.92
SWSAP1-201ENST00000312423 H0Y9P7 68 aa9.3□□□□□ -0.92
SWSAP1-201ENST00000312423 LINC00208Q96KT6 92 aa9.29□□□□□ -0.92
SWSAP1-201ENST00000312423 MUC2Q02817 5179 aa9.29□□□□□ -0.92
SWSAP1-201ENST00000312423 C8orf17Q9NRJ1 99 aa9.28□□□□□ -0.92
SWSAP1-201ENST00000312423 SPANXA2-OT1Q8N9U9 137 aa9.26□□□□□ -0.93
SWSAP1-201ENST00000312423 C1orf64Q8NEQ6 169 aa9.25□□□□□ -0.93
SWSAP1-201ENST00000312423 TP53AIP1Q9HCN2 124 aa9.25□□□□□ -0.93
SWSAP1-201ENST00000312423 MRPL34Q9BQ48 92 aaKnown RBP9.16□□□□□ -0.94
SWSAP1-201ENST00000312423 Q8N9P0 234 aaPredicted RBP9.15□□□□□ -0.94
SWSAP1-201ENST00000312423 PMAIP1Q13794 54 aa9.14□□□□□ -0.95
SWSAP1-201ENST00000312423 Q1T7F1 81 aa9.13□□□□□ -0.95
SWSAP1-201ENST00000312423 NDUFS5O43920 106 aa9.12□□□□□ -0.95
SWSAP1-201ENST00000312423 MPLKIPQ8TAP9 179 aa9.12□□□□□ -0.95
SWSAP1-201ENST00000312423 COX6B2Q6YFQ2 88 aa9.04□□□□□ -0.96
SWSAP1-201ENST00000312423 KRTAP19-2Q3LHN2 52 aa9.01□□□□□ -0.97
SWSAP1-201ENST00000312423 FAT4Q6V0I7 4981 aa9□□□□□ -0.97
SWSAP1-201ENST00000312423 LOC101927531A0A1B0GV80 90 aa9□□□□□ -0.97
SWSAP1-201ENST00000312423 Q5W150 140 aa8.99□□□□□ -0.97
SWSAP1-201ENST00000312423 LCE2CQ5TA81 110 aa8.98□□□□□ -0.97
SWSAP1-201ENST00000312423 SPINK7P58062 85 aa8.97□□□□□ -0.97
SWSAP1-201ENST00000312423 LCE2AQ5TA79 106 aaPredicted RBP8.97□□□□□ -0.97
SWSAP1-201ENST00000312423 COA5Q86WW8 74 aa8.97□□□□□ -0.97
SWSAP1-201ENST00000312423 H3BS24 57 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms