RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 JMJD7-PLA2G4BH0Y9G9 81 aa6.3□□□□□ -1.4
SCFD1-201ENST00000311943 LYRM7Q5U5X0 104 aa6.3□□□□□ -1.4
SCFD1-201ENST00000311943 Q75L30 129 aa6.3□□□□□ -1.4
SCFD1-201ENST00000311943 A0A0U1RQV1 116 aa6.3□□□□□ -1.4
SCFD1-201ENST00000311943 COL5A1-AS1Q5SY13 56 aa6.29□□□□□ -1.4
SCFD1-201ENST00000311943 C20orf166-AS1Q96NR2 134 aa6.29□□□□□ -1.4
SCFD1-201ENST00000311943 A8MUU9 505 aa6.28□□□□□ -1.4
SCFD1-201ENST00000311943 LINC00313P59037 77 aa6.28□□□□□ -1.4
SCFD1-201ENST00000311943 H3BT86 120 aa6.26□□□□□ -1.41
SCFD1-201ENST00000311943 ATP11AUNQ6ZP68 121 aa6.26□□□□□ -1.41
SCFD1-201ENST00000311943 PRO0461Q9UI25 63 aa6.26□□□□□ -1.41
SCFD1-201ENST00000311943 MT1HP80294 61 aa6.25□□□□□ -1.41
SCFD1-201ENST00000311943 A0A1B0GVX0 72 aa6.25□□□□□ -1.41
SCFD1-201ENST00000311943 IGKV3D-7A0A0C4DH55 119 aa6.23□□□□□ -1.41
SCFD1-201ENST00000311943 K7EP34 96 aa6.23□□□□□ -1.41
SCFD1-201ENST00000311943 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-201ENST00000311943 NREPQ16612 68 aa6.2□□□□□ -1.42
SCFD1-201ENST00000311943 PDE6GP18545 87 aa6.19□□□□□ -1.42
SCFD1-201ENST00000311943 LORP23490 312 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-201ENST00000311943 Q8N9L7 120 aa6.19□□□□□ -1.42
SCFD1-201ENST00000311943 A8MWP4 228 aa6.18□□□□□ -1.42
SCFD1-201ENST00000311943 K7EQZ3 153 aa6.18□□□□□ -1.42
SCFD1-201ENST00000311943 SVIPQ8NHG7 77 aa6.17□□□□□ -1.42
SCFD1-201ENST00000311943 C8orf17Q9NRJ1 99 aa6.17□□□□□ -1.42
SCFD1-201ENST00000311943 J3KT08 172 aa6.16□□□□□ -1.42
SCFD1-201ENST00000311943 COX6B2Q6YFQ2 88 aa6.16□□□□□ -1.42
SCFD1-201ENST00000311943 Q6ZVQ6 151 aa6.15□□□□□ -1.42
SCFD1-201ENST00000311943 H3BS24 57 aa6.15□□□□□ -1.43
SCFD1-201ENST00000311943 LINC00846Q9NV44 126 aa6.15□□□□□ -1.43
SCFD1-201ENST00000311943 C8orf87E5RJ46 101 aa6.14□□□□□ -1.43
SCFD1-201ENST00000311943 PRR15Q8IV56 129 aa6.14□□□□□ -1.43
SCFD1-201ENST00000311943 MMP24-AS1A0A0U1RRL7 71 aa6.13□□□□□ -1.43
SCFD1-201ENST00000311943 ETDBQ3ZM63 59 aa6.13□□□□□ -1.43
SCFD1-201ENST00000311943 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
SCFD1-201ENST00000311943 A0A1B0GW54 56 aa6.13□□□□□ -1.43
SCFD1-201ENST00000311943 NDUFB1O75438 58 aa6.13□□□□□ -1.43
SCFD1-201ENST00000311943 BPY2O14599 106 aa6.12□□□□□ -1.43
SCFD1-201ENST00000311943 Q8N9P0 234 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-201ENST00000311943 FSIP2Q5CZC0 6907 aa6.11□□□□□ -1.43
SCFD1-201ENST00000311943 HRES1P13985 223 aa6.1□□□□□ -1.43
SCFD1-201ENST00000311943 GTF2H5Q6ZYL4 71 aa6.09□□□□□ -1.43
SCFD1-201ENST00000311943 ZCCHC13Q8WW36 166 aaKnown RBP6.09□□□□□ -1.43
SCFD1-201ENST00000311943 M0R2T5 61 aa6.09□□□□□ -1.43
SCFD1-201ENST00000311943 KRTAP10-6P60371 365 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-201ENST00000311943 WFDC13Q8IUB5 93 aa6.08□□□□□ -1.44
SCFD1-201ENST00000311943 F8W1H4 67 aa6.06□□□□□ -1.44
SCFD1-201ENST00000311943 SPINK7P58062 85 aa6.06□□□□□ -1.44
SCFD1-201ENST00000311943 A0A1B0GV90 55 aa6.05□□□□□ -1.44
SCFD1-201ENST00000311943 hDV103S1A0JD37 113 aa6.05□□□□□ -1.44
SCFD1-201ENST00000311943 MPLKIPQ8TAP9 179 aa6.05□□□□□ -1.44
SCFD1-201ENST00000311943 MRPL34Q9BQ48 92 aaKnown RBP6.05□□□□□ -1.44
SCFD1-201ENST00000311943 Q5W150 140 aa6.04□□□□□ -1.44
SCFD1-201ENST00000311943 NDUFS5O43920 106 aa6.03□□□□□ -1.44
SCFD1-201ENST00000311943 TMEM254Q8TBM7 123 aa6.02□□□□□ -1.45
SCFD1-201ENST00000311943 UBL5Q9BZL1 73 aa6□□□□□ -1.45
SCFD1-201ENST00000311943 CASC2Q6XLA1 102 aa5.99□□□□□ -1.45
SCFD1-201ENST00000311943 FAM236DA0A1B0GTK5 79 aa5.99□□□□□ -1.45
SCFD1-201ENST00000311943 FAM236CP0DP71 79 aa5.99□□□□□ -1.45
SCFD1-201ENST00000311943 HCG22E2RYF7 251 aa5.98□□□□□ -1.45
SCFD1-201ENST00000311943 KRTAP9-8Q9BYQ0 159 aa5.95□□□□□ -1.46
SCFD1-201ENST00000311943 IGKV2D-30A0A075B6S6 120 aa5.94□□□□□ -1.46
SCFD1-201ENST00000311943 IGKV2-30P06310 120 aa5.94□□□□□ -1.46
SCFD1-201ENST00000311943 RBM12B-AS1Q9P1G2 102 aa5.94□□□□□ -1.46
SCFD1-201ENST00000311943 LOC100996750A0A140TA64 210 aa5.91□□□□□ -1.46
SCFD1-201ENST00000311943 KRTAP4-6Q9BYQ5 205 aa5.91□□□□□ -1.46
SCFD1-201ENST00000311943 CXCL6P80162 114 aa5.87□□□□□ -1.47
SCFD1-201ENST00000311943 MT2AP02795 61 aa5.87□□□□□ -1.47
SCFD1-201ENST00000311943 C4orf26Q17RF5 130 aa5.86□□□□□ -1.47
SCFD1-201ENST00000311943 MT1FP04733 61 aa5.86□□□□□ -1.47
SCFD1-201ENST00000311943 A0A087WVE0 104 aa5.85□□□□□ -1.47
SCFD1-201ENST00000311943 USH2AO75445 5202 aa5.84□□□□□ -1.47
SCFD1-201ENST00000311943 KRTAP9-6A0A140TA67 174 aa5.84□□□□□ -1.48
SCFD1-201ENST00000311943 HIST1H4AP62805 103 aaKnown RBP5.82□□□□□ -1.48
SCFD1-201ENST00000311943 C7orf65Q6ZTY9 151 aa5.82□□□□□ -1.48
SCFD1-201ENST00000311943 FAM240AA0A1B0GVK7 77 aa5.81□□□□□ -1.48
SCFD1-201ENST00000311943 KRTAP3-1Q9BYR8 98 aa5.81□□□□□ -1.48
SCFD1-201ENST00000311943 ACYP1P07311 99 aa5.81□□□□□ -1.48
SCFD1-201ENST00000311943 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
SCFD1-201ENST00000311943 KRTAP10-10P60014 251 aa5.76□□□□□ -1.49
SCFD1-201ENST00000311943 H1FX-AS1Q4G0G2 97 aa5.76□□□□□ -1.49
SCFD1-201ENST00000311943 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
SCFD1-201ENST00000311943 SSPOA2VEC9 5147 aa5.74□□□□□ -1.49
SCFD1-201ENST00000311943 LINC00643Q86TS7 51 aa5.74□□□□□ -1.49
SCFD1-201ENST00000311943 ATP5EP2Q5VTU8 51 aa5.72□□□□□ -1.49
SCFD1-201ENST00000311943 TP53AIP1Q9HCN2 124 aa5.72□□□□□ -1.49
SCFD1-201ENST00000311943 CYP4F30PQ9H0H9 118 aa5.7□□□□□ -1.5
SCFD1-201ENST00000311943 C1orf64Q8NEQ6 169 aa5.69□□□□□ -1.5
SCFD1-201ENST00000311943 TRAV22A0A0B4J277 110 aa5.69□□□□□ -1.5
SCFD1-201ENST00000311943 C5orf47Q569G3 176 aa5.69□□□□□ -1.5
SCFD1-201ENST00000311943 H0Y9P7 68 aa5.65□□□□□ -1.5
SCFD1-201ENST00000311943 LCA10Q71F78 164 aa5.65□□□□□ -1.5
SCFD1-201ENST00000311943 OCR1Q9BZK8 76 aa5.63□□□□□ -1.51
SCFD1-201ENST00000311943 UQCRQO14949 82 aa5.62□□□□□ -1.51
SCFD1-201ENST00000311943 KLKP1Q107X0 134 aa5.62□□□□□ -1.51
SCFD1-201ENST00000311943 MT-ATP8P03928 68 aa5.62□□□□□ -1.51
SCFD1-201ENST00000311943 J3QR89 54 aa5.6□□□□□ -1.51
SCFD1-201ENST00000311943 LINC00208Q96KT6 92 aa5.6□□□□□ -1.51
SCFD1-201ENST00000311943 S4R3F8 94 aa5.6□□□□□ -1.51
SCFD1-201ENST00000311943 LOC101927531A0A1B0GV80 90 aa5.6□□□□□ -1.51
SCFD1-201ENST00000311943 KRTAP19-1Q8IUB9 90 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms