RNA–Protein interactions for RNA: ENST00000311180.8

PDE12-201, Transcript of phosphodiesterase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE12, Length 8,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE12-201ENST00000311180 HTTP42858 3142 aa6.96□□□□□ -1.3
PDE12-201ENST00000311180 A8MU10 97 aa6.95□□□□□ -1.3
PDE12-201ENST00000311180 LAMA3Q16787 3333 aa6.95□□□□□ -1.3
PDE12-201ENST00000311180 C10orf95Q9H7T3 257 aa6.94□□□□□ -1.3
PDE12-201ENST00000311180 BRCA2P51587 3418 aa6.93□□□□□ -1.3
PDE12-201ENST00000311180 XIRP2A4UGR9 3374 aa6.92□□□□□ -1.3
PDE12-201ENST00000311180 TNRC18O15417 2968 aaPredicted RBP6.92□□□□□ -1.3
PDE12-201ENST00000311180 ZZEF1O43149 2961 aa6.91□□□□□ -1.3
PDE12-201ENST00000311180 DCHS2Q6V1P9 2916 aa6.88□□□□□ -1.31
PDE12-201ENST00000311180 KRTAP10-1P60331 282 aa6.87□□□□□ -1.31
PDE12-201ENST00000311180 LAMA1P25391 3075 aa6.84□□□□□ -1.31
PDE12-201ENST00000311180 SRRM2Q9UQ35 2752 aaKnown RBP6.81□□□□□ -1.32
PDE12-201ENST00000311180 P0C880 135 aa6.8□□□□□ -1.32
PDE12-201ENST00000311180 Q6ZRN7 208 aaPredicted RBP6.8□□□□□ -1.32
PDE12-201ENST00000311180 KRTAP10-2P60368 255 aa6.8□□□□□ -1.32
PDE12-201ENST00000311180 ZANQ9Y493 2812 aa6.8□□□□□ -1.32
PDE12-201ENST00000311180 UNC80Q8N2C7 3258 aa6.79□□□□□ -1.32
PDE12-201ENST00000311180 TENM4Q6N022 2769 aa6.79□□□□□ -1.32
PDE12-201ENST00000311180 CELSR3Q9NYQ7 3312 aa6.76□□□□□ -1.33
PDE12-201ENST00000311180 KRTAP13-1Q8IUC0 172 aa6.75□□□□□ -1.33
PDE12-201ENST00000311180 REV3LO60673 3130 aa6.75□□□□□ -1.33
PDE12-201ENST00000311180 CDH23Q9H251 3354 aa6.74□□□□□ -1.33
PDE12-201ENST00000311180 DNAH14Q0VDD8 3507 aa6.74□□□□□ -1.33
PDE12-201ENST00000311180 BOD1L1Q8NFC6 3051 aa6.72□□□□□ -1.33
PDE12-201ENST00000311180 FBN2P35556 2912 aa6.67□□□□□ -1.34
PDE12-201ENST00000311180 DMXL1Q9Y485 3027 aa6.66□□□□□ -1.34
PDE12-201ENST00000311180 H0YAA0 97 aa6.65□□□□□ -1.34
PDE12-201ENST00000311180 VWFP04275 2813 aa6.64□□□□□ -1.35
PDE12-201ENST00000311180 ATMQ13315 3056 aa6.64□□□□□ -1.35
PDE12-201ENST00000311180 KRTAP13-2Q52LG2 175 aa6.64□□□□□ -1.35
PDE12-201ENST00000311180 ADGRG4Q8IZF6 3080 aa6.63□□□□□ -1.35
PDE12-201ENST00000311180 PKD1L1Q8TDX9 2849 aa6.63□□□□□ -1.35
PDE12-201ENST00000311180 CELSR1Q9NYQ6 3014 aa6.63□□□□□ -1.35
PDE12-201ENST00000311180 VCANP13611 3396 aa6.61□□□□□ -1.35
PDE12-201ENST00000311180 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
PDE12-201ENST00000311180 KRTAP7-1Q8IUC3 87 aa6.56□□□□□ -1.36
PDE12-201ENST00000311180 COL6A3P12111 3177 aa6.53□□□□□ -1.36
PDE12-201ENST00000311180 USP34Q70CQ2 3546 aa6.53□□□□□ -1.36
PDE12-201ENST00000311180 MXRA5Q9NR99 2828 aa6.51□□□□□ -1.37
PDE12-201ENST00000311180 KRTAP10-8P60410 259 aa6.51□□□□□ -1.37
PDE12-201ENST00000311180 TENM2Q9NT68 2774 aa6.5□□□□□ -1.37
PDE12-201ENST00000311180 SZT2Q5T011 3432 aa6.48□□□□□ -1.37
PDE12-201ENST00000311180 COL7A1Q02388 2944 aa6.44□□□□□ -1.38
PDE12-201ENST00000311180 SPTBN5Q9NRC6 3674 aaKnown RBP6.42□□□□□ -1.38
PDE12-201ENST00000311180 CFAP47Q6ZTR5 3102 aa6.42□□□□□ -1.38
PDE12-201ENST00000311180 HRNRQ86YZ3 2850 aaPredicted RBP6.4□□□□□ -1.38
PDE12-201ENST00000311180 TPRXLQ17RH7 258 aa6.37□□□□□ -1.39
PDE12-201ENST00000311180 XP32Q5T750 250 aa6.37□□□□□ -1.39
PDE12-201ENST00000311180 EYSQ5T1H1 3165 aa6.27□□□□□ -1.41
PDE12-201ENST00000311180 SPEGQ15772 3267 aa6.26□□□□□ -1.41
PDE12-201ENST00000311180 KRTAP13-4Q3LI77 160 aa6.26□□□□□ -1.41
PDE12-201ENST00000311180 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
PDE12-201ENST00000311180 INE1O15225 51 aa6.24□□□□□ -1.41
PDE12-201ENST00000311180 MEGF8Q7Z7M0 2845 aa6.24□□□□□ -1.41
PDE12-201ENST00000311180 WDFY3Q8IZQ1 3526 aa6.2□□□□□ -1.42
PDE12-201ENST00000311180 MYO15AQ9UKN7 3530 aa6.18□□□□□ -1.42
PDE12-201ENST00000311180 KRTAP10-10P60014 251 aa6.17□□□□□ -1.42
PDE12-201ENST00000311180 KRTAP13-3Q3SY46 172 aa6.16□□□□□ -1.42
PDE12-201ENST00000311180 LOC400499M0QZD8 3231 aa6.14□□□□□ -1.43
PDE12-201ENST00000311180 KRTAP21-3Q3LHN1 58 aa6.11□□□□□ -1.43
PDE12-201ENST00000311180 KRTAP12-2P59991 146 aa6.11□□□□□ -1.43
PDE12-201ENST00000311180 FBN3Q75N90 2809 aa6.09□□□□□ -1.44
PDE12-201ENST00000311180 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
PDE12-201ENST00000311180 FBN1P35555 2871 aaKnown RBP6.04□□□□□ -1.44
PDE12-201ENST00000311180 A0A1B0GVY2 172 aa6.02□□□□□ -1.45
PDE12-201ENST00000311180 ZFHX4Q86UP3 3567 aa5.98□□□□□ -1.45
PDE12-201ENST00000311180 OTOGQ6ZRI0 2925 aa5.92□□□□□ -1.46
PDE12-201ENST00000311180 ASPMQ8IZT6 3477 aa5.92□□□□□ -1.46
PDE12-201ENST00000311180 KRTAP15-1Q3LI76 137 aa5.92□□□□□ -1.46
PDE12-201ENST00000311180 LAMA5O15230 3695 aa5.91□□□□□ -1.46
PDE12-201ENST00000311180 NBPF19A0A087WUL8 3843 aa5.89□□□□□ -1.47
PDE12-201ENST00000311180 ZFHX3Q15911 3703 aa5.88□□□□□ -1.47
PDE12-201ENST00000311180 DCHS1Q96JQ0 3298 aa5.85□□□□□ -1.47
PDE12-201ENST00000311180 RELNP78509 3460 aa5.81□□□□□ -1.48
PDE12-201ENST00000311180 CSMD1Q96PZ7 3565 aa5.79□□□□□ -1.48
PDE12-201ENST00000311180 DMDP11532 3685 aa5.78□□□□□ -1.48
PDE12-201ENST00000311180 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
PDE12-201ENST00000311180 SPENQ96T58 3664 aaKnown RBP5.76□□□□□ -1.49
PDE12-201ENST00000311180 SMG1Q96Q15 3661 aaKnown RBP5.75□□□□□ -1.49
PDE12-201ENST00000311180 KRTAP10-6P60371 365 aaPredicted RBP5.71□□□□□ -1.5
PDE12-201ENST00000311180 KRTAP3-1Q9BYR8 98 aa5.68□□□□□ -1.5
PDE12-201ENST00000311180 SVEP1Q4LDE5 3571 aa5.61□□□□□ -1.51
PDE12-201ENST00000311180 KRTAP10-12P60413 245 aa5.58□□□□□ -1.52
PDE12-201ENST00000311180 CUBNO60494 3623 aa5.53□□□□□ -1.52
PDE12-201ENST00000311180 VPS13CQ709C8 3753 aa5.51□□□□□ -1.53
PDE12-201ENST00000311180 TRRAPQ9Y4A5 3859 aa5.48□□□□□ -1.53
PDE12-201ENST00000311180 MUC3AQ02505 3323 aa5.44□□□□□ -1.54
PDE12-201ENST00000311180 KRTAP12-3P60328 96 aa5.44□□□□□ -1.54
PDE12-201ENST00000311180 KRTAP3-2Q9BYR7 98 aa5.41□□□□□ -1.54
PDE12-201ENST00000311180 BSNQ9UPA5 3926 aa5.39□□□□□ -1.55
PDE12-201ENST00000311180 KRTAP3-3Q9BYR6 98 aa5.34□□□□□ -1.55
PDE12-201ENST00000311180 AKAP9Q99996 3911 aa5.28□□□□□ -1.56
PDE12-201ENST00000311180 CSMD2Q7Z408 3487 aa5.25□□□□□ -1.57
PDE12-201ENST00000311180 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
PDE12-201ENST00000311180 CSMD3Q7Z407 3707 aa5.17□□□□□ -1.58
PDE12-201ENST00000311180 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
PDE12-201ENST00000311180 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
PDE12-201ENST00000311180 ALMS1Q8TCU4 4167 aa5.1□□□□□ -1.59
PDE12-201ENST00000311180 KRTAP19-4Q3LI73 84 aa5.06□□□□□ -1.6
PDE12-201ENST00000311180 ZNF469Q96JG9 3925 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms