RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 TP53AIP1Q9HCN2 124 aa13.34□□□□□ -0.27
CTSF-201ENST00000310325 VPS13BQ7Z7G8 4022 aa13.32□□□□□ -0.28
CTSF-201ENST00000310325 NOTCH2NLQ7Z3S9 236 aa13.3□□□□□ -0.28
CTSF-201ENST00000310325 MRPL34Q9BQ48 92 aaKnown RBP13.3□□□□□ -0.28
CTSF-201ENST00000310325 C1orf64Q8NEQ6 169 aa13.28□□□□□ -0.28
CTSF-201ENST00000310325 PKHD1P08F94 4074 aa13.28□□□□□ -0.28
CTSF-201ENST00000310325 NDUFS5O43920 106 aa13.27□□□□□ -0.29
CTSF-201ENST00000310325 Q5XG85 94 aa13.27□□□□□ -0.29
CTSF-201ENST00000310325 A0A1B0GVY2 172 aa13.23□□□□□ -0.29
CTSF-201ENST00000310325 SMIM26A0A096LP01 95 aa13.22□□□□□ -0.29
CTSF-201ENST00000310325 PLA2G1BP04054 148 aaKnown RBP13.22□□□□□ -0.29
CTSF-201ENST00000310325 CYP4F30PQ9H0H9 118 aa13.21□□□□□ -0.29
CTSF-201ENST00000310325 C8orf87E5RJ46 101 aa13.2□□□□□ -0.3
CTSF-201ENST00000310325 C1orf195Q5TG92 126 aa13.2□□□□□ -0.3
CTSF-201ENST00000310325 LIMD2Q9BT23 127 aa13.18□□□□□ -0.3
CTSF-201ENST00000310325 DYNC1H1Q14204 4646 aaKnown RBP13.18□□□□□ -0.3
CTSF-201ENST00000310325 PRR4Q16378 134 aa13.17□□□□□ -0.3
CTSF-201ENST00000310325 SPANXA2-OT1Q8N9U9 137 aa13.17□□□□□ -0.3
CTSF-201ENST00000310325 TYMSOSQ8TAI1 123 aa13.17□□□□□ -0.3
CTSF-201ENST00000310325 FP248Q71RG6 208 aaPredicted RBP13.15□□□□□ -0.3
CTSF-201ENST00000310325 SMR3BP02814 79 aaPredicted RBP13.12□□□□□ -0.31
CTSF-201ENST00000310325 C4orf48Q5BLP8 95 aa13.12□□□□□ -0.31
CTSF-201ENST00000310325 C4orf26Q17RF5 130 aa13.12□□□□□ -0.31
CTSF-201ENST00000310325 LINC00313P59037 77 aa13.1□□□□□ -0.31
CTSF-201ENST00000310325 RYR2Q92736 4967 aa13.09□□□□□ -0.31
CTSF-201ENST00000310325 SPINK1P00995 79 aa13.08□□□□□ -0.32
CTSF-201ENST00000310325 KMT2CQ8NEZ4 4911 aaKnown RBP13.05□□□□□ -0.32
CTSF-201ENST00000310325 PRR26Q8N8Z3 221 aa13.05□□□□□ -0.32
CTSF-201ENST00000310325 PCOTHQ58A44 107 aa13.04□□□□□ -0.32
CTSF-201ENST00000310325 APOBP04114 4563 aaKnown RBP13.04□□□□□ -0.32
CTSF-201ENST00000310325 KRTAP13-3Q3SY46 172 aa13.02□□□□□ -0.33
CTSF-201ENST00000310325 Q5W150 140 aa13.02□□□□□ -0.33
CTSF-201ENST00000310325 IGLV7-46A0A075B6I9 117 aa13.01□□□□□ -0.33
CTSF-201ENST00000310325 KRTAP10-4P60372 401 aaPredicted RBP13□□□□□ -0.33
CTSF-201ENST00000310325 Q8N9P0 234 aaPredicted RBP13□□□□□ -0.33
CTSF-201ENST00000310325 LINC00304Q8N9R0 145 aa13□□□□□ -0.33
CTSF-201ENST00000310325 LOC101927531A0A1B0GV80 90 aa12.99□□□□□ -0.33
CTSF-201ENST00000310325 RPS29P62273 56 aaKnown RBP12.96□□□□□ -0.33
CTSF-201ENST00000310325 KRTAP16-1A8MUX0 517 aa12.96□□□□□ -0.34
CTSF-201ENST00000310325 SPAG11AQ6PDA7 123 aa12.95□□□□□ -0.34
CTSF-201ENST00000310325 MPLKIPQ8TAP9 179 aa12.95□□□□□ -0.34
CTSF-201ENST00000310325 FAM229AH3BQW9 127 aa12.92□□□□□ -0.34
CTSF-201ENST00000310325 FAT1Q14517 4588 aa12.92□□□□□ -0.34
CTSF-201ENST00000310325 Q1T7F1 81 aa12.84□□□□□ -0.35
CTSF-201ENST00000310325 COA5Q86WW8 74 aa12.83□□□□□ -0.36
CTSF-201ENST00000310325 RETNLBQ9BQ08 111 aa12.83□□□□□ -0.36
CTSF-201ENST00000310325 PKHD1L1Q86WI1 4243 aa12.81□□□□□ -0.36
CTSF-201ENST00000310325 SVIPQ8NHG7 77 aa12.78□□□□□ -0.36
CTSF-201ENST00000310325 RYR3Q15413 4870 aa12.77□□□□□ -0.37
CTSF-201ENST00000310325 IGKV2-30P06310 120 aa12.76□□□□□ -0.37
CTSF-201ENST00000310325 V9GYY9 64 aa12.72□□□□□ -0.37
CTSF-201ENST00000310325 HRES1P13985 223 aa12.71□□□□□ -0.38
CTSF-201ENST00000310325 PSPHP1O15172 72 aa12.62□□□□□ -0.39
CTSF-201ENST00000310325 IGKV2D-30A0A075B6S6 120 aa12.62□□□□□ -0.39
CTSF-201ENST00000310325 DMAC1Q96GE9 116 aa12.61□□□□□ -0.39
CTSF-201ENST00000310325 Q5VSD8 79 aa12.6□□□□□ -0.39
CTSF-201ENST00000310325 ACYP2P14621 99 aa12.59□□□□□ -0.39
CTSF-201ENST00000310325 C9orf92A6NGG3 77 aa12.57□□□□□ -0.4
CTSF-201ENST00000310325 A8MUN3 132 aa12.57□□□□□ -0.4
CTSF-201ENST00000310325 HSPG2P98160 4391 aa12.57□□□□□ -0.4
CTSF-201ENST00000310325 BRK1Q8WUW1 75 aa12.53□□□□□ -0.4
CTSF-201ENST00000310325 C20orf166-AS1Q96NR2 134 aa12.53□□□□□ -0.4
CTSF-201ENST00000310325 A8MUU9 505 aa12.52□□□□□ -0.4
CTSF-201ENST00000310325 FLG2Q5D862 2391 aaPredicted RBP12.51□□□□□ -0.41
CTSF-201ENST00000310325 Q8N1X5 172 aa12.5□□□□□ -0.41
CTSF-201ENST00000310325 PRO0628Q9UI54 55 aa12.5□□□□□ -0.41
CTSF-201ENST00000310325 Q5VV11 94 aa12.5□□□□□ -0.41
CTSF-201ENST00000310325 C7orf65Q6ZTY9 151 aa12.5□□□□□ -0.41
CTSF-201ENST00000310325 PRR15LQ9BU68 103 aa12.5□□□□□ -0.41
CTSF-201ENST00000310325 KRTAP10-8P60410 259 aa12.49□□□□□ -0.41
CTSF-201ENST00000310325 LINC01558Q9Y6Z2 57 aa12.46□□□□□ -0.41
CTSF-201ENST00000310325 RYR1P21817 5038 aa12.46□□□□□ -0.41
CTSF-201ENST00000310325 TNXBP22105 4242 aa12.46□□□□□ -0.42
CTSF-201ENST00000310325 CHKB-CPT1BH3BT56 60 aa12.44□□□□□ -0.42
CTSF-201ENST00000310325 LRP1Q07954 4544 aaKnown RBP12.43□□□□□ -0.42
CTSF-201ENST00000310325 FAT3Q8TDW7 4589 aa12.38□□□□□ -0.43
CTSF-201ENST00000310325 Q75L30 129 aa12.38□□□□□ -0.43
CTSF-201ENST00000310325 KRTAP17-1Q9BYP8 105 aa12.37□□□□□ -0.43
CTSF-201ENST00000310325 EPPK1P58107 5090 aaKnown RBP12.32□□□□□ -0.44
CTSF-201ENST00000310325 KIAA1109Q2LD37 5005 aa12.26□□□□□ -0.45
CTSF-201ENST00000310325 A6NED7 52 aa12.21□□□□□ -0.45
CTSF-201ENST00000310325 SPINK7P58062 85 aa12.21□□□□□ -0.45
CTSF-201ENST00000310325 MT1HL1P0DM35 61 aa12.19□□□□□ -0.46
CTSF-201ENST00000310325 DMBT1Q9UGM3 2413 aaPredicted RBP12.16□□□□□ -0.46
CTSF-201ENST00000310325 A8MU10 97 aa12.15□□□□□ -0.47
CTSF-201ENST00000310325 ATP11AUNQ6ZP68 121 aa12.12□□□□□ -0.47
CTSF-201ENST00000310325 A0A1B0GU69 56 aa12.1□□□□□ -0.47
CTSF-201ENST00000310325 RPL37P61927 97 aaKnown RBP12.1□□□□□ -0.47
CTSF-201ENST00000310325 LCA10Q71F78 164 aa12.1□□□□□ -0.47
CTSF-201ENST00000310325 MYCBP2O75592 4640 aa12.08□□□□□ -0.47
CTSF-201ENST00000310325 XP32Q5T750 250 aa12.08□□□□□ -0.48
CTSF-201ENST00000310325 KRTAP3-1Q9BYR8 98 aa12.08□□□□□ -0.48
CTSF-201ENST00000310325 CDC42SE1Q9NRR8 79 aa12.07□□□□□ -0.48
CTSF-201ENST00000310325 SPTSSBQ8NFR3 76 aa12.01□□□□□ -0.49
CTSF-201ENST00000310325 COX6B2Q6YFQ2 88 aa11.99□□□□□ -0.49
CTSF-201ENST00000310325 KRTAP4-5Q9BYR2 181 aa11.88□□□□□ -0.51
CTSF-201ENST00000310325 SEC61GP60059 68 aa11.86□□□□□ -0.51
CTSF-201ENST00000310325 UQCR11O14957 56 aa11.84□□□□□ -0.51
CTSF-201ENST00000310325 PMAIP1Q13794 54 aa11.84□□□□□ -0.51
CTSF-201ENST00000310325 TPRXLQ17RH7 258 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms