RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 DCHS1Q96JQ0 3298 aa1.94□□□□□ -2.1
CLOCK-201ENST00000309964 PDZD2O15018 2839 aa1.94□□□□□ -2.1
CLOCK-201ENST00000309964 TGP01266 2768 aa1.94□□□□□ -2.1
CLOCK-201ENST00000309964 MUC3AQ02505 3323 aa1.94□□□□□ -2.1
CLOCK-201ENST00000309964 PKD1L1Q8TDX9 2849 aa1.94□□□□□ -2.1
CLOCK-201ENST00000309964 ANAPC11Q9NYG5 84 aa1.93□□□□□ -2.1
CLOCK-201ENST00000309964 ASPMQ8IZT6 3477 aa1.93□□□□□ -2.1
CLOCK-201ENST00000309964 LAMA5O15230 3695 aa1.93□□□□□ -2.1
CLOCK-201ENST00000309964 C4orf26Q17RF5 130 aa1.92□□□□□ -2.1
CLOCK-201ENST00000309964 Q75L30 129 aa1.92□□□□□ -2.1
CLOCK-201ENST00000309964 Q8N1X5 172 aa1.92□□□□□ -2.1
CLOCK-201ENST00000309964 M0QZ58 72 aa1.92□□□□□ -2.1
CLOCK-201ENST00000309964 RELNP78509 3460 aa1.91□□□□□ -2.1
CLOCK-201ENST00000309964 MMP24-AS1A0A0U1RRL7 71 aa1.91□□□□□ -2.1
CLOCK-201ENST00000309964 RPL37P61927 97 aaKnown RBP1.91□□□□□ -2.1
CLOCK-201ENST00000309964 KRTAP26-1Q6PEX3 210 aa1.9□□□□□ -2.11
CLOCK-201ENST00000309964 LINC01558Q9Y6Z2 57 aa1.9□□□□□ -2.11
CLOCK-201ENST00000309964 H1FX-AS1Q4G0G2 97 aa1.89□□□□□ -2.11
CLOCK-201ENST00000309964 KRTAP4-16G5E9R7 235 aaPredicted RBP1.89□□□□□ -2.11
CLOCK-201ENST00000309964 A0A0D9SG42 100 aa1.89□□□□□ -2.11
CLOCK-201ENST00000309964 Q5W150 140 aa1.89□□□□□ -2.11
CLOCK-201ENST00000309964 TENM2Q9NT68 2774 aa1.89□□□□□ -2.11
CLOCK-201ENST00000309964 VWFP04275 2813 aa1.89□□□□□ -2.11
CLOCK-201ENST00000309964 ZFHX4Q86UP3 3567 aa1.89□□□□□ -2.11
CLOCK-201ENST00000309964 KRTAP10-1P60331 282 aa1.89□□□□□ -2.11
CLOCK-201ENST00000309964 HRNRQ86YZ3 2850 aaPredicted RBP1.88□□□□□ -2.11
CLOCK-201ENST00000309964 PANO1I0J062 215 aa1.88□□□□□ -2.11
CLOCK-201ENST00000309964 KRTAP1-5Q9BYS1 174 aa1.88□□□□□ -2.11
CLOCK-201ENST00000309964 KRTAP10-2P60368 255 aa1.87□□□□□ -2.11
CLOCK-201ENST00000309964 Q8N9P0 234 aaPredicted RBP1.86□□□□□ -2.11
CLOCK-201ENST00000309964 Q6ZRN7 208 aaPredicted RBP1.86□□□□□ -2.11
CLOCK-201ENST00000309964 ROMO1P60602 79 aa1.86□□□□□ -2.11
CLOCK-201ENST00000309964 COL7A1Q02388 2944 aa1.86□□□□□ -2.11
CLOCK-201ENST00000309964 A0A0G2JQZ4 141 aa1.85□□□□□ -2.11
CLOCK-201ENST00000309964 KRTAP16-1A8MUX0 517 aa1.84□□□□□ -2.11
CLOCK-201ENST00000309964 DMDP11532 3685 aa1.84□□□□□ -2.12
CLOCK-201ENST00000309964 SRRM2Q9UQ35 2752 aaKnown RBP1.84□□□□□ -2.12
CLOCK-201ENST00000309964 TPRXLQ17RH7 258 aa1.83□□□□□ -2.12
CLOCK-201ENST00000309964 PRO2289Q9P1D8 64 aa1.83□□□□□ -2.12
CLOCK-201ENST00000309964 FBN1P35555 2871 aaKnown RBP1.83□□□□□ -2.12
CLOCK-201ENST00000309964 PCLOQ9Y6V0 5065 aa1.83□□□□□ -2.12
CLOCK-201ENST00000309964 C20orf166-AS1Q96NR2 134 aa1.83□□□□□ -2.12
CLOCK-201ENST00000309964 A8MUU9 505 aa1.82□□□□□ -2.12
CLOCK-201ENST00000309964 SMG1Q96Q15 3661 aaKnown RBP1.82□□□□□ -2.12
CLOCK-201ENST00000309964 PP632Q6XCG6 107 aa1.82□□□□□ -2.12
CLOCK-201ENST00000309964 SPENQ96T58 3664 aaKnown RBP1.82□□□□□ -2.12
CLOCK-201ENST00000309964 KRTAP29-1A8MX34 341 aaPredicted RBP1.82□□□□□ -2.12
CLOCK-201ENST00000309964 TNP1P09430 55 aa1.81□□□□□ -2.12
CLOCK-201ENST00000309964 KRTAP13-1Q8IUC0 172 aa1.81□□□□□ -2.12
CLOCK-201ENST00000309964 ADM2Q7Z4H4 148 aa1.81□□□□□ -2.12
CLOCK-201ENST00000309964 Q8NDZ9 215 aa1.8□□□□□ -2.12
CLOCK-201ENST00000309964 H3BS24 57 aa1.8□□□□□ -2.12
CLOCK-201ENST00000309964 SPATA8Q6RVD6 105 aa1.79□□□□□ -2.12
CLOCK-201ENST00000309964 NDUFAF8A1L188 74 aa1.79□□□□□ -2.12
CLOCK-201ENST00000309964 Q5VV11 94 aa1.79□□□□□ -2.12
CLOCK-201ENST00000309964 OTOGQ6ZRI0 2925 aa1.78□□□□□ -2.12
CLOCK-201ENST00000309964 CUBNO60494 3623 aa1.77□□□□□ -2.13
CLOCK-201ENST00000309964 BSNQ9UPA5 3926 aa1.77□□□□□ -2.13
CLOCK-201ENST00000309964 KRTAP13-2Q52LG2 175 aa1.75□□□□□ -2.13
CLOCK-201ENST00000309964 CSMD1Q96PZ7 3565 aa1.75□□□□□ -2.13
CLOCK-201ENST00000309964 TRRAPQ9Y4A5 3859 aa1.75□□□□□ -2.13
CLOCK-201ENST00000309964 MEGF8Q7Z7M0 2845 aa1.74□□□□□ -2.13
CLOCK-201ENST00000309964 SVEP1Q4LDE5 3571 aa1.74□□□□□ -2.13
CLOCK-201ENST00000309964 XP32Q5T750 250 aa1.73□□□□□ -2.13
CLOCK-201ENST00000309964 KRTAP25-1Q3LHN0 102 aa1.72□□□□□ -2.13
CLOCK-201ENST00000309964 KRTAP1-4P0C5Y4 121 aa1.72□□□□□ -2.13
CLOCK-201ENST00000309964 CSMD2Q7Z408 3487 aa1.71□□□□□ -2.14
CLOCK-201ENST00000309964 FBN3Q75N90 2809 aa1.71□□□□□ -2.14
CLOCK-201ENST00000309964 KRTAP11-1Q8IUC1 163 aa1.7□□□□□ -2.14
CLOCK-201ENST00000309964 KRTAP7-1Q8IUC3 87 aa1.7□□□□□ -2.14
CLOCK-201ENST00000309964 KRTAP10-8P60410 259 aa1.7□□□□□ -2.14
CLOCK-201ENST00000309964 KRTAP13-3Q3SY46 172 aa1.69□□□□□ -2.14
CLOCK-201ENST00000309964 H0YAA0 97 aa1.69□□□□□ -2.14
CLOCK-201ENST00000309964 KRTAP10-10P60014 251 aa1.68□□□□□ -2.14
CLOCK-201ENST00000309964 A6NN06 94 aa1.68□□□□□ -2.14
CLOCK-201ENST00000309964 VPS13CQ709C8 3753 aa1.67□□□□□ -2.14
CLOCK-201ENST00000309964 A0A1B0GVY2 172 aa1.66□□□□□ -2.14
CLOCK-201ENST00000309964 CYSTM1Q9H1C7 97 aa1.66□□□□□ -2.14
CLOCK-201ENST00000309964 ZNF469Q96JG9 3925 aaPredicted RBP1.65□□□□□ -2.15
CLOCK-201ENST00000309964 AKAP9Q99996 3911 aa1.63□□□□□ -2.15
CLOCK-201ENST00000309964 PRAC1Q96KF2 57 aa1.63□□□□□ -2.15
CLOCK-201ENST00000309964 INE1O15225 51 aa1.62□□□□□ -2.15
CLOCK-201ENST00000309964 A8MU10 97 aa1.61□□□□□ -2.15
CLOCK-201ENST00000309964 C10orf95Q9H7T3 257 aa1.61□□□□□ -2.15
CLOCK-201ENST00000309964 P0C880 135 aa1.6□□□□□ -2.15
CLOCK-201ENST00000309964 CSMD3Q7Z407 3707 aa1.59□□□□□ -2.16
CLOCK-201ENST00000309964 KRTAP13-4Q3LI77 160 aa1.58□□□□□ -2.16
CLOCK-201ENST00000309964 HYDINQ4G0P3 5121 aa1.56□□□□□ -2.16
CLOCK-201ENST00000309964 KRTAP19-4Q3LI73 84 aa1.56□□□□□ -2.16
CLOCK-201ENST00000309964 KRTAP23-1A1A580 65 aa1.56□□□□□ -2.16
CLOCK-201ENST00000309964 UBR4Q5T4S7 5183 aa1.53□□□□□ -2.17
CLOCK-201ENST00000309964 ANK3Q12955 4377 aaKnown RBP1.52□□□□□ -2.17
CLOCK-201ENST00000309964 KRTAP12-1P59990 96 aa1.49□□□□□ -2.17
CLOCK-201ENST00000309964 DNAH1Q9P2D7 4330 aa1.48□□□□□ -2.17
CLOCK-201ENST00000309964 ANK2Q01484 3957 aa1.48□□□□□ -2.17
CLOCK-201ENST00000309964 HUWE1Q7Z6Z7 4374 aaKnown RBP1.48□□□□□ -2.17
CLOCK-201ENST00000309964 MT1HL1P0DM35 61 aa1.47□□□□□ -2.17
CLOCK-201ENST00000309964 VPS13BQ7Z7G8 4022 aa1.47□□□□□ -2.17
CLOCK-201ENST00000309964 KRTAP12-2P59991 146 aa1.47□□□□□ -2.17
CLOCK-201ENST00000309964 KRTAP15-1Q3LI76 137 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms