RNA–Protein interactions for RNA: ENST00000309890.11

ATP2A3-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-201ENST00000309890 SPTBN5Q9NRC6 3674 aaKnown RBP10.44□□□□□ -0.74
ATP2A3-201ENST00000309890 NF1P21359 2839 aa10.43□□□□□ -0.74
ATP2A3-201ENST00000309890 KRTAP13-1Q8IUC0 172 aa10.42□□□□□ -0.74
ATP2A3-201ENST00000309890 FBN2P35556 2912 aa10.4□□□□□ -0.74
ATP2A3-201ENST00000309890 S4R3F8 94 aa10.39□□□□□ -0.75
ATP2A3-201ENST00000309890 CRYBG3Q68DQ2 2970 aa10.37□□□□□ -0.75
ATP2A3-201ENST00000309890 SPATA8Q6RVD6 105 aa10.37□□□□□ -0.75
ATP2A3-201ENST00000309890 USP34Q70CQ2 3546 aa10.35□□□□□ -0.75
ATP2A3-201ENST00000309890 H1FX-AS1Q4G0G2 97 aa10.33□□□□□ -0.76
ATP2A3-201ENST00000309890 RPL37P61927 97 aaKnown RBP10.33□□□□□ -0.76
ATP2A3-201ENST00000309890 A6NN06 94 aa10.32□□□□□ -0.76
ATP2A3-201ENST00000309890 LUZP6Q538Z0 58 aa10.27□□□□□ -0.77
ATP2A3-201ENST00000309890 CAMK2N1Q7Z7J9 78 aa10.26□□□□□ -0.77
ATP2A3-201ENST00000309890 ROMO1P60602 79 aa10.24□□□□□ -0.77
ATP2A3-201ENST00000309890 A8MU10 97 aa10.21□□□□□ -0.77
ATP2A3-201ENST00000309890 H3BS24 57 aa10.21□□□□□ -0.77
ATP2A3-201ENST00000309890 RPS29P62273 56 aaKnown RBP10.2□□□□□ -0.78
ATP2A3-201ENST00000309890 MXRA5Q9NR99 2828 aa10.2□□□□□ -0.78
ATP2A3-201ENST00000309890 KRTAP13-2Q52LG2 175 aa10.19□□□□□ -0.78
ATP2A3-201ENST00000309890 R4GN34 69 aa10.17□□□□□ -0.78
ATP2A3-201ENST00000309890 TENM3Q9P273 2699 aa10.15□□□□□ -0.78
ATP2A3-201ENST00000309890 Q5VSD8 79 aa10.15□□□□□ -0.79
ATP2A3-201ENST00000309890 MYO15AQ9UKN7 3530 aa10.14□□□□□ -0.79
ATP2A3-201ENST00000309890 SEC61BP60468 96 aaKnown RBP10.07□□□□□ -0.8
ATP2A3-201ENST00000309890 ADM2Q7Z4H4 148 aa10.01□□□□□ -0.81
ATP2A3-201ENST00000309890 M0QZ58 72 aa10□□□□□ -0.81
ATP2A3-201ENST00000309890 M0R2T5 61 aa9.99□□□□□ -0.81
ATP2A3-201ENST00000309890 KRTAP25-1Q3LHN0 102 aa9.98□□□□□ -0.81
ATP2A3-201ENST00000309890 CELSR1Q9NYQ6 3014 aa9.92□□□□□ -0.82
ATP2A3-201ENST00000309890 TENM1Q9UKZ4 2725 aa9.92□□□□□ -0.82
ATP2A3-201ENST00000309890 RELNP78509 3460 aa9.88□□□□□ -0.83
ATP2A3-201ENST00000309890 A8MUU9 505 aa9.87□□□□□ -0.83
ATP2A3-201ENST00000309890 WDFY3Q8IZQ1 3526 aa9.86□□□□□ -0.83
ATP2A3-201ENST00000309890 DCHS1Q96JQ0 3298 aa9.84□□□□□ -0.83
ATP2A3-201ENST00000309890 C20orf166-AS1Q96NR2 134 aa9.84□□□□□ -0.83
ATP2A3-201ENST00000309890 PKD1L1Q8TDX9 2849 aa9.82□□□□□ -0.84
ATP2A3-201ENST00000309890 A0A0A0MQY5 61 aa9.81□□□□□ -0.84
ATP2A3-201ENST00000309890 KRTAP1-4P0C5Y4 121 aa9.79□□□□□ -0.84
ATP2A3-201ENST00000309890 PDZD2O15018 2839 aa9.71□□□□□ -0.86
ATP2A3-201ENST00000309890 TENM2Q9NT68 2774 aa9.69□□□□□ -0.86
ATP2A3-201ENST00000309890 TGP01266 2768 aa9.67□□□□□ -0.86
ATP2A3-201ENST00000309890 KRTAP16-1A8MUX0 517 aa9.67□□□□□ -0.86
ATP2A3-201ENST00000309890 ZFHX4Q86UP3 3567 aa9.65□□□□□ -0.87
ATP2A3-201ENST00000309890 ASPMQ8IZT6 3477 aa9.6□□□□□ -0.87
ATP2A3-201ENST00000309890 LAMA5O15230 3695 aa9.6□□□□□ -0.87
ATP2A3-201ENST00000309890 VWFP04275 2813 aa9.58□□□□□ -0.88
ATP2A3-201ENST00000309890 H0YAA0 97 aa9.57□□□□□ -0.88
ATP2A3-201ENST00000309890 KRTAP13-3Q3SY46 172 aa9.56□□□□□ -0.88
ATP2A3-201ENST00000309890 PLAC4Q8WY50 150 aa9.52□□□□□ -0.88
ATP2A3-201ENST00000309890 KRTAP21-3Q3LHN1 58 aa9.51□□□□□ -0.89
ATP2A3-201ENST00000309890 NDUFAF8A1L188 74 aa9.51□□□□□ -0.89
ATP2A3-201ENST00000309890 CSMD1Q96PZ7 3565 aa9.5□□□□□ -0.89
ATP2A3-201ENST00000309890 SRRM2Q9UQ35 2752 aaKnown RBP9.46□□□□□ -0.89
ATP2A3-201ENST00000309890 FBN1P35555 2871 aaKnown RBP9.46□□□□□ -0.9
ATP2A3-201ENST00000309890 XP32Q5T750 250 aa9.45□□□□□ -0.9
ATP2A3-201ENST00000309890 MUC3AQ02505 3323 aa9.44□□□□□ -0.9
ATP2A3-201ENST00000309890 SMG1Q96Q15 3661 aaKnown RBP9.42□□□□□ -0.9
ATP2A3-201ENST00000309890 DMDP11532 3685 aa9.37□□□□□ -0.91
ATP2A3-201ENST00000309890 OTOGQ6ZRI0 2925 aa9.34□□□□□ -0.91
ATP2A3-201ENST00000309890 C10orf95Q9H7T3 257 aa9.33□□□□□ -0.92
ATP2A3-201ENST00000309890 TNP1P09430 55 aa9.29□□□□□ -0.92
ATP2A3-201ENST00000309890 PP632Q6XCG6 107 aa9.22□□□□□ -0.93
ATP2A3-201ENST00000309890 P0C880 135 aa9.22□□□□□ -0.93
ATP2A3-201ENST00000309890 TPRXLQ17RH7 258 aa9.21□□□□□ -0.94
ATP2A3-201ENST00000309890 SVEP1Q4LDE5 3571 aa9.18□□□□□ -0.94
ATP2A3-201ENST00000309890 FBN3Q75N90 2809 aa9.14□□□□□ -0.95
ATP2A3-201ENST00000309890 NBPF19A0A087WUL8 3843 aa9.09□□□□□ -0.95
ATP2A3-201ENST00000309890 KRTAP10-8P60410 259 aa9.08□□□□□ -0.96
ATP2A3-201ENST00000309890 ZFHX3Q15911 3703 aa9.08□□□□□ -0.96
ATP2A3-201ENST00000309890 CUBNO60494 3623 aa9.06□□□□□ -0.96
ATP2A3-201ENST00000309890 A0A1B0GVY2 172 aa9.02□□□□□ -0.97
ATP2A3-201ENST00000309890 KRTAP3-1Q9BYR8 98 aa8.98□□□□□ -0.97
ATP2A3-201ENST00000309890 MEGF8Q7Z7M0 2845 aa8.95□□□□□ -0.98
ATP2A3-201ENST00000309890 SPENQ96T58 3664 aaKnown RBP8.94□□□□□ -0.98
ATP2A3-201ENST00000309890 ANK3Q12955 4377 aaKnown RBP8.91□□□□□ -0.98
ATP2A3-201ENST00000309890 CSMD2Q7Z408 3487 aa8.91□□□□□ -0.98
ATP2A3-201ENST00000309890 KRTAP12-2P59991 146 aa8.89□□□□□ -0.99
ATP2A3-201ENST00000309890 COL7A1Q02388 2944 aa8.83□□□□□ -1
ATP2A3-201ENST00000309890 TRRAPQ9Y4A5 3859 aa8.83□□□□□ -1
ATP2A3-201ENST00000309890 KRTAP12-1P59990 96 aa8.81□□□□□ -1
ATP2A3-201ENST00000309890 BSNQ9UPA5 3926 aa8.76□□□□□ -1.01
ATP2A3-201ENST00000309890 KRTAP10-6P60371 365 aaPredicted RBP8.73□□□□□ -1.01
ATP2A3-201ENST00000309890 KRTAP13-4Q3LI77 160 aa8.68□□□□□ -1.02
ATP2A3-201ENST00000309890 KRTAP10-10P60014 251 aa8.66□□□□□ -1.02
ATP2A3-201ENST00000309890 PRO2289Q9P1D8 64 aa8.5□□□□□ -1.05
ATP2A3-201ENST00000309890 KRTAP3-2Q9BYR7 98 aa8.47□□□□□ -1.05
ATP2A3-201ENST00000309890 VPS13CQ709C8 3753 aa8.45□□□□□ -1.06
ATP2A3-201ENST00000309890 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
ATP2A3-201ENST00000309890 MT1HL1P0DM35 61 aa8.36□□□□□ -1.07
ATP2A3-201ENST00000309890 KRTAP10-4P60372 401 aaPredicted RBP8.36□□□□□ -1.07
ATP2A3-201ENST00000309890 HUWE1Q7Z6Z7 4374 aaKnown RBP8.36□□□□□ -1.07
ATP2A3-201ENST00000309890 KRTAP15-1Q3LI76 137 aa8.25□□□□□ -1.09
ATP2A3-201ENST00000309890 ZNF469Q96JG9 3925 aaPredicted RBP8.13□□□□□ -1.11
ATP2A3-201ENST00000309890 CSMD3Q7Z407 3707 aa8.07□□□□□ -1.12
ATP2A3-201ENST00000309890 AKAP9Q99996 3911 aa8□□□□□ -1.13
ATP2A3-201ENST00000309890 DNAH9Q9NYC9 4486 aa7.98□□□□□ -1.13
ATP2A3-201ENST00000309890 DNAH5Q8TE73 4624 aa7.87□□□□□ -1.15
ATP2A3-201ENST00000309890 KRTAP4-5Q9BYR2 181 aa7.86□□□□□ -1.15
ATP2A3-201ENST00000309890 DNAH1Q9P2D7 4330 aa7.86□□□□□ -1.15
ATP2A3-201ENST00000309890 PLECQ15149 4684 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms