RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 KRTAP9-2Q9BYQ4 174 aa4.94□□□□□ -1.62
PDE4D-201ENST00000309641 KRTAP9-6A0A140TA67 174 aa4.93□□□□□ -1.62
PDE4D-201ENST00000309641 PDE6GP18545 87 aa4.93□□□□□ -1.62
PDE4D-201ENST00000309641 SIGMAR1Q99720 223 aa4.93□□□□□ -1.62
PDE4D-201ENST00000309641 NOTCH2NLQ7Z3S9 236 aa4.91□□□□□ -1.62
PDE4D-201ENST00000309641 A0A1B0GV90 55 aa4.9□□□□□ -1.62
PDE4D-201ENST00000309641 F8W1H4 67 aa4.9□□□□□ -1.62
PDE4D-201ENST00000309641 ETDBQ3ZM63 59 aa4.9□□□□□ -1.62
PDE4D-201ENST00000309641 MUC17Q685J3 4493 aa4.9□□□□□ -1.63
PDE4D-201ENST00000309641 DSCR10P59022 87 aa4.9□□□□□ -1.63
PDE4D-201ENST00000309641 KRTAP4-1Q9BYQ7 146 aa4.9□□□□□ -1.63
PDE4D-201ENST00000309641 A0A1B0GW54 56 aa4.89□□□□□ -1.63
PDE4D-201ENST00000309641 PCOTHQ58A44 107 aa4.88□□□□□ -1.63
PDE4D-201ENST00000309641 IGHV6-1A0A0B4J1U7 121 aa4.87□□□□□ -1.63
PDE4D-201ENST00000309641 SEC61BP60468 96 aaKnown RBP4.87□□□□□ -1.63
PDE4D-201ENST00000309641 RPL37P61927 97 aaKnown RBP4.87□□□□□ -1.63
PDE4D-201ENST00000309641 NREPQ16612 68 aa4.87□□□□□ -1.63
PDE4D-201ENST00000309641 SEC61GP60059 68 aa4.86□□□□□ -1.63
PDE4D-201ENST00000309641 A0A1B0GVX0 72 aa4.85□□□□□ -1.63
PDE4D-201ENST00000309641 KRTAP16-1A8MUX0 517 aa4.85□□□□□ -1.63
PDE4D-201ENST00000309641 LINC00313P59037 77 aa4.85□□□□□ -1.63
PDE4D-201ENST00000309641 LCE2CQ5TA81 110 aa4.85□□□□□ -1.63
PDE4D-201ENST00000309641 LINC00846Q9NV44 126 aa4.85□□□□□ -1.63
PDE4D-201ENST00000309641 IGKV3D-7A0A0C4DH55 119 aa4.84□□□□□ -1.63
PDE4D-201ENST00000309641 J3KT08 172 aa4.84□□□□□ -1.63
PDE4D-201ENST00000309641 Q6ZVQ6 151 aa4.84□□□□□ -1.64
PDE4D-201ENST00000309641 A8MWP4 228 aa4.83□□□□□ -1.64
PDE4D-201ENST00000309641 C5orf47Q569G3 176 aa4.83□□□□□ -1.64
PDE4D-201ENST00000309641 Q75L30 129 aa4.83□□□□□ -1.64
PDE4D-201ENST00000309641 C20orf166-AS1Q96NR2 134 aa4.83□□□□□ -1.64
PDE4D-201ENST00000309641 A8MUU9 505 aa4.82□□□□□ -1.64
PDE4D-201ENST00000309641 K7EQZ3 153 aa4.81□□□□□ -1.64
PDE4D-201ENST00000309641 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
PDE4D-201ENST00000309641 Q8N9L7 120 aa4.8□□□□□ -1.64
PDE4D-201ENST00000309641 BPY2O14599 106 aa4.8□□□□□ -1.64
PDE4D-201ENST00000309641 NDUFB1O75438 58 aa4.8□□□□□ -1.64
PDE4D-201ENST00000309641 PRR15Q8IV56 129 aa4.8□□□□□ -1.64
PDE4D-201ENST00000309641 C8orf87E5RJ46 101 aa4.79□□□□□ -1.64
PDE4D-201ENST00000309641 C8orf17Q9NRJ1 99 aa4.79□□□□□ -1.64
PDE4D-201ENST00000309641 ATP11AUNQ6ZP68 121 aa4.78□□□□□ -1.64
PDE4D-201ENST00000309641 UBL5Q9BZL1 73 aa4.78□□□□□ -1.64
PDE4D-201ENST00000309641 FAT4Q6V0I7 4981 aa4.78□□□□□ -1.64
PDE4D-201ENST00000309641 MMP24-AS1A0A0U1RRL7 71 aa4.77□□□□□ -1.65
PDE4D-201ENST00000309641 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
PDE4D-201ENST00000309641 KRTAP19-2Q3LHN2 52 aa4.74□□□□□ -1.65
PDE4D-201ENST00000309641 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
PDE4D-201ENST00000309641 Q8N9P0 234 aaPredicted RBP4.74□□□□□ -1.65
PDE4D-201ENST00000309641 hDV103S1A0JD37 113 aa4.72□□□□□ -1.65
PDE4D-201ENST00000309641 WFDC13Q8IUB5 93 aa4.72□□□□□ -1.65
PDE4D-201ENST00000309641 FAM240AA0A1B0GVK7 77 aa4.72□□□□□ -1.65
PDE4D-201ENST00000309641 MRPL34Q9BQ48 92 aaKnown RBP4.72□□□□□ -1.65
PDE4D-201ENST00000309641 ACYP1P07311 99 aa4.71□□□□□ -1.66
PDE4D-201ENST00000309641 TMEM254Q8TBM7 123 aa4.71□□□□□ -1.66
PDE4D-201ENST00000309641 ZCCHC13Q8WW36 166 aaKnown RBP4.7□□□□□ -1.66
PDE4D-201ENST00000309641 CXCL6P80162 114 aa4.69□□□□□ -1.66
PDE4D-201ENST00000309641 CASC2Q6XLA1 102 aa4.69□□□□□ -1.66
PDE4D-201ENST00000309641 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
PDE4D-201ENST00000309641 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
PDE4D-201ENST00000309641 A0A0U1RQV1 116 aa4.68□□□□□ -1.66
PDE4D-201ENST00000309641 NDUFS5O43920 106 aa4.67□□□□□ -1.66
PDE4D-201ENST00000309641 HCG22E2RYF7 251 aa4.67□□□□□ -1.66
PDE4D-201ENST00000309641 SCGB1A1P11684 91 aa4.67□□□□□ -1.66
PDE4D-201ENST00000309641 Q5W150 140 aa4.66□□□□□ -1.66
PDE4D-201ENST00000309641 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
PDE4D-201ENST00000309641 HRES1P13985 223 aa4.63□□□□□ -1.67
PDE4D-201ENST00000309641 SPINK7P58062 85 aa4.63□□□□□ -1.67
PDE4D-201ENST00000309641 LINC00643Q86TS7 51 aa4.63□□□□□ -1.67
PDE4D-201ENST00000309641 MT1HP80294 61 aa4.62□□□□□ -1.67
PDE4D-201ENST00000309641 COX6B2Q6YFQ2 88 aa4.62□□□□□ -1.67
PDE4D-201ENST00000309641 A0A087WVE0 104 aa4.62□□□□□ -1.67
PDE4D-201ENST00000309641 J3QR89 54 aa4.62□□□□□ -1.67
PDE4D-201ENST00000309641 HIST1H4AP62805 103 aaKnown RBP4.62□□□□□ -1.67
PDE4D-201ENST00000309641 ATP5EP2Q5VTU8 51 aa4.62□□□□□ -1.67
PDE4D-201ENST00000309641 MPLKIPQ8TAP9 179 aa4.61□□□□□ -1.67
PDE4D-201ENST00000309641 V9GYY9 64 aa4.61□□□□□ -1.67
PDE4D-201ENST00000309641 FLGP20930 4061 aaPredicted RBP4.6□□□□□ -1.67
PDE4D-201ENST00000309641 IGKV2D-30A0A075B6S6 120 aa4.57□□□□□ -1.68
PDE4D-201ENST00000309641 IGKV2-30P06310 120 aa4.57□□□□□ -1.68
PDE4D-201ENST00000309641 FAM236DA0A1B0GTK5 79 aa4.55□□□□□ -1.68
PDE4D-201ENST00000309641 K7ERU9 68 aa4.55□□□□□ -1.68
PDE4D-201ENST00000309641 FAM236CP0DP71 79 aa4.55□□□□□ -1.68
PDE4D-201ENST00000309641 SMIM20Q8N5G0 67 aa4.55□□□□□ -1.68
PDE4D-201ENST00000309641 RBM12B-AS1Q9P1G2 102 aa4.55□□□□□ -1.68
PDE4D-201ENST00000309641 C7orf65Q6ZTY9 151 aa4.53□□□□□ -1.68
PDE4D-201ENST00000309641 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
PDE4D-201ENST00000309641 TP53AIP1Q9HCN2 124 aa4.53□□□□□ -1.68
PDE4D-201ENST00000309641 MT-ATP8P03928 68 aa4.53□□□□□ -1.68
PDE4D-201ENST00000309641 M0R2T5 61 aa4.52□□□□□ -1.69
PDE4D-201ENST00000309641 KRTAP10-6P60371 365 aaPredicted RBP4.5□□□□□ -1.69
PDE4D-201ENST00000309641 C4orf26Q17RF5 130 aa4.5□□□□□ -1.69
PDE4D-201ENST00000309641 TRAV22A0A0B4J277 110 aa4.49□□□□□ -1.69
PDE4D-201ENST00000309641 H3BS24 57 aa4.49□□□□□ -1.69
PDE4D-201ENST00000309641 OCR1Q9BZK8 76 aa4.48□□□□□ -1.69
PDE4D-201ENST00000309641 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
PDE4D-201ENST00000309641 UQCRQO14949 82 aa4.47□□□□□ -1.69
PDE4D-201ENST00000309641 H0Y9P7 68 aa4.46□□□□□ -1.69
PDE4D-201ENST00000309641 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.69
PDE4D-201ENST00000309641 CYP4F30PQ9H0H9 118 aa4.46□□□□□ -1.69
PDE4D-201ENST00000309641 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
PDE4D-201ENST00000309641 KRTAP3-1Q9BYR8 98 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms