RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 MP68P56378 58 aa13.96□□□□□ -0.17
RFWD2-201ENST00000308769 SMR3BP02814 79 aaPredicted RBP13.95□□□□□ -0.18
RFWD2-201ENST00000308769 H0Y9P7 68 aa13.94□□□□□ -0.18
RFWD2-201ENST00000308769 PLA2G1BP04054 148 aaKnown RBP13.94□□□□□ -0.18
RFWD2-201ENST00000308769 LINC00208Q96KT6 92 aa13.93□□□□□ -0.18
RFWD2-201ENST00000308769 ATP5EP56381 51 aaPredicted RBP13.91□□□□□ -0.18
RFWD2-201ENST00000308769 SERP1Q9Y6X1 66 aa13.9□□□□□ -0.18
RFWD2-201ENST00000308769 MRPL34Q9BQ48 92 aaKnown RBP13.88□□□□□ -0.19
RFWD2-201ENST00000308769 TRAV22A0A0B4J277 110 aa13.87□□□□□ -0.19
RFWD2-201ENST00000308769 APOBP04114 4563 aaKnown RBP13.87□□□□□ -0.19
RFWD2-201ENST00000308769 NDUFS5O43920 106 aa13.86□□□□□ -0.19
RFWD2-201ENST00000308769 Q5XG85 94 aa13.85□□□□□ -0.19
RFWD2-201ENST00000308769 TYMSOSQ8TAI1 123 aa13.85□□□□□ -0.19
RFWD2-201ENST00000308769 C1orf195Q5TG92 126 aa13.84□□□□□ -0.19
RFWD2-201ENST00000308769 TP53AIP1Q9HCN2 124 aa13.84□□□□□ -0.19
RFWD2-201ENST00000308769 H3BPC8 53 aa13.82□□□□□ -0.2
RFWD2-201ENST00000308769 C1orf64Q8NEQ6 169 aa13.81□□□□□ -0.2
RFWD2-201ENST00000308769 FAT1Q14517 4588 aa13.79□□□□□ -0.2
RFWD2-201ENST00000308769 PRR26Q8N8Z3 221 aa13.79□□□□□ -0.2
RFWD2-201ENST00000308769 LIMD2Q9BT23 127 aa13.78□□□□□ -0.2
RFWD2-201ENST00000308769 KRTAP10-4P60372 401 aaPredicted RBP13.77□□□□□ -0.21
RFWD2-201ENST00000308769 C4orf48Q5BLP8 95 aa13.76□□□□□ -0.21
RFWD2-201ENST00000308769 C8orf87E5RJ46 101 aa13.74□□□□□ -0.21
RFWD2-201ENST00000308769 PRR4Q16378 134 aa13.74□□□□□ -0.21
RFWD2-201ENST00000308769 SPINK1P00995 79 aa13.71□□□□□ -0.21
RFWD2-201ENST00000308769 LINC00313P59037 77 aa13.7□□□□□ -0.22
RFWD2-201ENST00000308769 LINC00304Q8N9R0 145 aa13.67□□□□□ -0.22
RFWD2-201ENST00000308769 Q5W150 140 aa13.64□□□□□ -0.23
RFWD2-201ENST00000308769 CYP4F30PQ9H0H9 118 aa13.64□□□□□ -0.23
RFWD2-201ENST00000308769 PCOTHQ58A44 107 aa13.62□□□□□ -0.23
RFWD2-201ENST00000308769 SPANXA2-OT1Q8N9U9 137 aa13.6□□□□□ -0.23
RFWD2-201ENST00000308769 RYR3Q15413 4870 aa13.6□□□□□ -0.23
RFWD2-201ENST00000308769 KRTAP13-3Q3SY46 172 aa13.59□□□□□ -0.23
RFWD2-201ENST00000308769 SMIM26A0A096LP01 95 aa13.58□□□□□ -0.23
RFWD2-201ENST00000308769 FP248Q71RG6 208 aaPredicted RBP13.58□□□□□ -0.23
RFWD2-201ENST00000308769 KRTAP16-1A8MUX0 517 aa13.58□□□□□ -0.24
RFWD2-201ENST00000308769 Q8N9P0 234 aaPredicted RBP13.57□□□□□ -0.24
RFWD2-201ENST00000308769 RPS29P62273 56 aaKnown RBP13.56□□□□□ -0.24
RFWD2-201ENST00000308769 SPAG11AQ6PDA7 123 aa13.56□□□□□ -0.24
RFWD2-201ENST00000308769 C4orf26Q17RF5 130 aa13.53□□□□□ -0.24
RFWD2-201ENST00000308769 PKHD1L1Q86WI1 4243 aa13.52□□□□□ -0.24
RFWD2-201ENST00000308769 RETNLBQ9BQ08 111 aa13.49□□□□□ -0.25
RFWD2-201ENST00000308769 IGLV7-46A0A075B6I9 117 aa13.49□□□□□ -0.25
RFWD2-201ENST00000308769 LOC101927531A0A1B0GV80 90 aa13.49□□□□□ -0.25
RFWD2-201ENST00000308769 FAM229AH3BQW9 127 aa13.46□□□□□ -0.26
RFWD2-201ENST00000308769 HSPG2P98160 4391 aa13.42□□□□□ -0.26
RFWD2-201ENST00000308769 MPLKIPQ8TAP9 179 aa13.42□□□□□ -0.26
RFWD2-201ENST00000308769 Q5VSD8 79 aa13.39□□□□□ -0.27
RFWD2-201ENST00000308769 RYR1P21817 5038 aa13.31□□□□□ -0.28
RFWD2-201ENST00000308769 LRP1Q07954 4544 aaKnown RBP13.31□□□□□ -0.28
RFWD2-201ENST00000308769 IGKV2-30P06310 120 aa13.31□□□□□ -0.28
RFWD2-201ENST00000308769 COA5Q86WW8 74 aa13.31□□□□□ -0.28
RFWD2-201ENST00000308769 FLG2Q5D862 2391 aaPredicted RBP13.29□□□□□ -0.28
RFWD2-201ENST00000308769 C9orf92A6NGG3 77 aa13.27□□□□□ -0.28
RFWD2-201ENST00000308769 KRTAP17-1Q9BYP8 105 aa13.27□□□□□ -0.28
RFWD2-201ENST00000308769 HRES1P13985 223 aa13.25□□□□□ -0.29
RFWD2-201ENST00000308769 Q8N1X5 172 aa13.25□□□□□ -0.29
RFWD2-201ENST00000308769 TNXBP22105 4242 aa13.23□□□□□ -0.29
RFWD2-201ENST00000308769 Q1T7F1 81 aa13.22□□□□□ -0.29
RFWD2-201ENST00000308769 IGKV2D-30A0A075B6S6 120 aa13.22□□□□□ -0.29
RFWD2-201ENST00000308769 KIAA1109Q2LD37 5005 aa13.19□□□□□ -0.3
RFWD2-201ENST00000308769 KRTAP10-8P60410 259 aa13.19□□□□□ -0.3
RFWD2-201ENST00000308769 C20orf166-AS1Q96NR2 134 aa13.12□□□□□ -0.31
RFWD2-201ENST00000308769 A8MUU9 505 aa13.11□□□□□ -0.31
RFWD2-201ENST00000308769 EPPK1P58107 5090 aaKnown RBP13.11□□□□□ -0.31
RFWD2-201ENST00000308769 DMAC1Q96GE9 116 aa13.1□□□□□ -0.31
RFWD2-201ENST00000308769 FAT3Q8TDW7 4589 aa13.09□□□□□ -0.31
RFWD2-201ENST00000308769 PSPHP1O15172 72 aa13.09□□□□□ -0.31
RFWD2-201ENST00000308769 ACYP2P14621 99 aa13.06□□□□□ -0.32
RFWD2-201ENST00000308769 V9GYY9 64 aa13.06□□□□□ -0.32
RFWD2-201ENST00000308769 C7orf65Q6ZTY9 151 aa13.04□□□□□ -0.32
RFWD2-201ENST00000308769 DMBT1Q9UGM3 2413 aaPredicted RBP13.02□□□□□ -0.33
RFWD2-201ENST00000308769 A8MUN3 132 aa13.01□□□□□ -0.33
RFWD2-201ENST00000308769 MYCBP2O75592 4640 aa13.01□□□□□ -0.33
RFWD2-201ENST00000308769 MT1HL1P0DM35 61 aa12.94□□□□□ -0.34
RFWD2-201ENST00000308769 PRR15LQ9BU68 103 aa12.92□□□□□ -0.34
RFWD2-201ENST00000308769 Q5VV11 94 aa12.92□□□□□ -0.34
RFWD2-201ENST00000308769 CHKB-CPT1BH3BT56 60 aa12.91□□□□□ -0.34
RFWD2-201ENST00000308769 Q75L30 129 aa12.91□□□□□ -0.34
RFWD2-201ENST00000308769 BRK1Q8WUW1 75 aa12.9□□□□□ -0.34
RFWD2-201ENST00000308769 LINC01558Q9Y6Z2 57 aa12.87□□□□□ -0.35
RFWD2-201ENST00000308769 SVIPQ8NHG7 77 aa12.86□□□□□ -0.35
RFWD2-201ENST00000308769 SPINK7P58062 85 aa12.82□□□□□ -0.36
RFWD2-201ENST00000308769 PRO0628Q9UI54 55 aa12.79□□□□□ -0.36
RFWD2-201ENST00000308769 KRTAP4-5Q9BYR2 181 aa12.75□□□□□ -0.37
RFWD2-201ENST00000308769 XP32Q5T750 250 aa12.74□□□□□ -0.37
RFWD2-201ENST00000308769 ATP11AUNQ6ZP68 121 aa12.72□□□□□ -0.37
RFWD2-201ENST00000308769 RPL37P61927 97 aaKnown RBP12.71□□□□□ -0.38
RFWD2-201ENST00000308769 KRTAP3-1Q9BYR8 98 aa12.67□□□□□ -0.38
RFWD2-201ENST00000308769 A8MU10 97 aa12.62□□□□□ -0.39
RFWD2-201ENST00000308769 A6NED7 52 aa12.62□□□□□ -0.39
RFWD2-201ENST00000308769 A0A1B0GU69 56 aa12.55□□□□□ -0.4
RFWD2-201ENST00000308769 COX6B2Q6YFQ2 88 aa12.53□□□□□ -0.4
RFWD2-201ENST00000308769 ABCA13Q86UQ4 5058 aa12.52□□□□□ -0.4
RFWD2-201ENST00000308769 LCA10Q71F78 164 aa12.51□□□□□ -0.41
RFWD2-201ENST00000308769 TPRXLQ17RH7 258 aa12.47□□□□□ -0.41
RFWD2-201ENST00000308769 LRP2P98164 4655 aa12.42□□□□□ -0.42
RFWD2-201ENST00000308769 SPTSSBQ8NFR3 76 aa12.42□□□□□ -0.42
RFWD2-201ENST00000308769 CDC42SE1Q9NRR8 79 aa12.42□□□□□ -0.42
RFWD2-201ENST00000308769 LPAP08519 4548 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms