RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 ASB16-AS1Q495Z4 193 aa6.91□□□□□ -1.3
TRIM40-205ENST00000307859 FAM229AH3BQW9 127 aa6.9□□□□□ -1.3
TRIM40-205ENST00000307859 Q5XG85 94 aa6.9□□□□□ -1.31
TRIM40-205ENST00000307859 OCR1Q9BZK8 76 aa6.9□□□□□ -1.31
TRIM40-205ENST00000307859 PKHD1L1Q86WI1 4243 aa6.89□□□□□ -1.31
TRIM40-205ENST00000307859 NDUFB1O75438 58 aa6.88□□□□□ -1.31
TRIM40-205ENST00000307859 TYMSOSQ8TAI1 123 aa6.87□□□□□ -1.31
TRIM40-205ENST00000307859 MMP24-AS1A0A0U1RRL7 71 aa6.86□□□□□ -1.31
TRIM40-205ENST00000307859 WFDC13Q8IUB5 93 aa6.86□□□□□ -1.31
TRIM40-205ENST00000307859 A0A1B0GVX0 72 aa6.85□□□□□ -1.31
TRIM40-205ENST00000307859 CASC2Q6XLA1 102 aa6.84□□□□□ -1.31
TRIM40-205ENST00000307859 PRR26Q8N8Z3 221 aa6.84□□□□□ -1.31
TRIM40-205ENST00000307859 LIMD2Q9BT23 127 aa6.83□□□□□ -1.32
TRIM40-205ENST00000307859 C20orf197Q8N268 126 aa6.83□□□□□ -1.32
TRIM40-205ENST00000307859 CYSTM1Q9H1C7 97 aa6.83□□□□□ -1.32
TRIM40-205ENST00000307859 SPINK1P00995 79 aa6.82□□□□□ -1.32
TRIM40-205ENST00000307859 C8orf17Q9NRJ1 99 aa6.82□□□□□ -1.32
TRIM40-205ENST00000307859 C4orf48Q5BLP8 95 aa6.81□□□□□ -1.32
TRIM40-205ENST00000307859 C1orf195Q5TG92 126 aa6.81□□□□□ -1.32
TRIM40-205ENST00000307859 IGHV6-1A0A0B4J1U7 121 aa6.8□□□□□ -1.32
TRIM40-205ENST00000307859 hDV103S1A0JD37 113 aa6.8□□□□□ -1.32
TRIM40-205ENST00000307859 RPS29P62273 56 aaKnown RBP6.8□□□□□ -1.32
TRIM40-205ENST00000307859 KLKP1Q107X0 134 aa6.8□□□□□ -1.32
TRIM40-205ENST00000307859 SPAG11AQ6PDA7 123 aa6.79□□□□□ -1.32
TRIM40-205ENST00000307859 LINC00304Q8N9R0 145 aa6.79□□□□□ -1.32
TRIM40-205ENST00000307859 TMEM254Q8TBM7 123 aa6.79□□□□□ -1.32
TRIM40-205ENST00000307859 OXTP01178 125 aa6.78□□□□□ -1.32
TRIM40-205ENST00000307859 NOTCH2NLQ7Z3S9 236 aa6.77□□□□□ -1.33
TRIM40-205ENST00000307859 A0A0U1RQV1 116 aa6.76□□□□□ -1.33
TRIM40-205ENST00000307859 C8orf87E5RJ46 101 aa6.76□□□□□ -1.33
TRIM40-205ENST00000307859 C5orf47Q569G3 176 aa6.76□□□□□ -1.33
TRIM40-205ENST00000307859 SNURFQ9Y675 71 aa6.76□□□□□ -1.33
TRIM40-205ENST00000307859 TMEM258P61165 79 aa6.74□□□□□ -1.33
TRIM40-205ENST00000307859 MRPL34Q9BQ48 92 aaKnown RBP6.74□□□□□ -1.33
TRIM40-205ENST00000307859 H7BZZ5 65 aa6.73□□□□□ -1.33
TRIM40-205ENST00000307859 RPS28P62857 69 aaKnown RBP6.73□□□□□ -1.33
TRIM40-205ENST00000307859 NDUFC1O43677 76 aa6.72□□□□□ -1.33
TRIM40-205ENST00000307859 ZCCHC13Q8WW36 166 aaKnown RBP6.72□□□□□ -1.33
TRIM40-205ENST00000307859 TP53AIP1Q9HCN2 124 aa6.72□□□□□ -1.33
TRIM40-205ENST00000307859 RNF213Q63HN8 5207 aa6.7□□□□□ -1.34
TRIM40-205ENST00000307859 LINC00313P59037 77 aa6.69□□□□□ -1.34
TRIM40-205ENST00000307859 KRTAP9-2Q9BYQ4 174 aa6.69□□□□□ -1.34
TRIM40-205ENST00000307859 MP68P56378 58 aa6.68□□□□□ -1.34
TRIM40-205ENST00000307859 TRAV22A0A0B4J277 110 aa6.68□□□□□ -1.34
TRIM40-205ENST00000307859 H0Y9P7 68 aa6.68□□□□□ -1.34
TRIM40-205ENST00000307859 H3BPC8 53 aa6.68□□□□□ -1.34
TRIM40-205ENST00000307859 KRTAP9-6A0A140TA67 174 aa6.67□□□□□ -1.34
TRIM40-205ENST00000307859 LRP1Q07954 4544 aaKnown RBP6.67□□□□□ -1.34
TRIM40-205ENST00000307859 KRTAP16-1A8MUX0 517 aa6.66□□□□□ -1.34
TRIM40-205ENST00000307859 NDUFS5O43920 106 aa6.66□□□□□ -1.34
TRIM40-205ENST00000307859 KRTAP10-8P60410 259 aa6.66□□□□□ -1.34
TRIM40-205ENST00000307859 FAT3Q8TDW7 4589 aa6.66□□□□□ -1.34
TRIM40-205ENST00000307859 Q8N9P0 234 aaPredicted RBP6.65□□□□□ -1.34
TRIM40-205ENST00000307859 TNXBP22105 4242 aa6.65□□□□□ -1.34
TRIM40-205ENST00000307859 LINC00208Q96KT6 92 aa6.64□□□□□ -1.35
TRIM40-205ENST00000307859 FAM236DA0A1B0GTK5 79 aa6.63□□□□□ -1.35
TRIM40-205ENST00000307859 FAM236CP0DP71 79 aa6.63□□□□□ -1.35
TRIM40-205ENST00000307859 LRP2P98164 4655 aa6.62□□□□□ -1.35
TRIM40-205ENST00000307859 KRTAP13-3Q3SY46 172 aa6.61□□□□□ -1.35
TRIM40-205ENST00000307859 C1orf64Q8NEQ6 169 aa6.61□□□□□ -1.35
TRIM40-205ENST00000307859 ATP5EP56381 51 aaPredicted RBP6.6□□□□□ -1.35
TRIM40-205ENST00000307859 Q5W150 140 aa6.58□□□□□ -1.36
TRIM40-205ENST00000307859 MT1HL1P0DM35 61 aa6.56□□□□□ -1.36
TRIM40-205ENST00000307859 RETNLBQ9BQ08 111 aa6.56□□□□□ -1.36
TRIM40-205ENST00000307859 LOC101927531A0A1B0GV80 90 aa6.54□□□□□ -1.36
TRIM40-205ENST00000307859 SERP1Q9Y6X1 66 aa6.53□□□□□ -1.36
TRIM40-205ENST00000307859 SPANXA2-OT1Q8N9U9 137 aa6.52□□□□□ -1.37
TRIM40-205ENST00000307859 FP248Q71RG6 208 aaPredicted RBP6.5□□□□□ -1.37
TRIM40-205ENST00000307859 CYP4F30PQ9H0H9 118 aa6.5□□□□□ -1.37
TRIM40-205ENST00000307859 C9orf92A6NGG3 77 aa6.5□□□□□ -1.37
TRIM40-205ENST00000307859 C20orf166-AS1Q96NR2 134 aa6.5□□□□□ -1.37
TRIM40-205ENST00000307859 A8MUU9 505 aa6.49□□□□□ -1.37
TRIM40-205ENST00000307859 PCOTHQ58A44 107 aa6.48□□□□□ -1.37
TRIM40-205ENST00000307859 IGKV2-30P06310 120 aa6.47□□□□□ -1.37
TRIM40-205ENST00000307859 IGLV7-46A0A075B6I9 117 aa6.46□□□□□ -1.38
TRIM40-205ENST00000307859 PRR4Q16378 134 aa6.45□□□□□ -1.38
TRIM40-205ENST00000307859 SMIM26A0A096LP01 95 aa6.42□□□□□ -1.38
TRIM40-205ENST00000307859 Q75L30 129 aa6.42□□□□□ -1.38
TRIM40-205ENST00000307859 FAT4Q6V0I7 4981 aa6.42□□□□□ -1.38
TRIM40-205ENST00000307859 C4orf26Q17RF5 130 aa6.4□□□□□ -1.38
TRIM40-205ENST00000307859 IGKV2D-30A0A075B6S6 120 aa6.39□□□□□ -1.39
TRIM40-205ENST00000307859 HRES1P13985 223 aa6.38□□□□□ -1.39
TRIM40-205ENST00000307859 C7orf65Q6ZTY9 151 aa6.37□□□□□ -1.39
TRIM40-205ENST00000307859 XP32Q5T750 250 aa6.34□□□□□ -1.39
TRIM40-205ENST00000307859 RPL37P61927 97 aaKnown RBP6.33□□□□□ -1.4
TRIM40-205ENST00000307859 LCE2AQ5TA79 106 aaPredicted RBP6.33□□□□□ -1.4
TRIM40-205ENST00000307859 COA5Q86WW8 74 aa6.32□□□□□ -1.4
TRIM40-205ENST00000307859 DMAC1Q96GE9 116 aa6.32□□□□□ -1.4
TRIM40-205ENST00000307859 TPRXLQ17RH7 258 aa6.3□□□□□ -1.4
TRIM40-205ENST00000307859 PRO0628Q9UI54 55 aa6.29□□□□□ -1.4
TRIM40-205ENST00000307859 ATP11AUNQ6ZP68 121 aa6.28□□□□□ -1.4
TRIM40-205ENST00000307859 ACYP2P14621 99 aa6.28□□□□□ -1.4
TRIM40-205ENST00000307859 SPINK7P58062 85 aa6.28□□□□□ -1.4
TRIM40-205ENST00000307859 MUC2Q02817 5179 aa6.25□□□□□ -1.41
TRIM40-205ENST00000307859 CRCT1Q9UGL9 99 aa6.24□□□□□ -1.41
TRIM40-205ENST00000307859 A8MUN3 132 aa6.21□□□□□ -1.41
TRIM40-205ENST00000307859 Q1T7F1 81 aa6.21□□□□□ -1.41
TRIM40-205ENST00000307859 MPLKIPQ8TAP9 179 aa6.21□□□□□ -1.42
TRIM40-205ENST00000307859 LPAP08519 4548 aa6.2□□□□□ -1.42
TRIM40-205ENST00000307859 LCE2DQ5TA82 110 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms