RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 NDUFC1O43677 76 aa6.68□□□□□ -1.34
SCG2-201ENST00000305409 IGHV6-1A0A0B4J1U7 121 aa6.68□□□□□ -1.34
SCG2-201ENST00000305409 APOBP04114 4563 aaKnown RBP6.68□□□□□ -1.34
SCG2-201ENST00000305409 KRTAP29-1A8MX34 341 aaPredicted RBP6.67□□□□□ -1.34
SCG2-201ENST00000305409 NOTCH2NLQ7Z3S9 236 aa6.67□□□□□ -1.34
SCG2-201ENST00000305409 NDUFB1O75438 58 aa6.66□□□□□ -1.34
SCG2-201ENST00000305409 MMP24-AS1A0A0U1RRL7 71 aa6.65□□□□□ -1.34
SCG2-201ENST00000305409 KRTAP1-4P0C5Y4 121 aa6.65□□□□□ -1.34
SCG2-201ENST00000305409 A0A1B0GVY2 172 aa6.63□□□□□ -1.35
SCG2-201ENST00000305409 hDV103S1A0JD37 113 aa6.63□□□□□ -1.35
SCG2-201ENST00000305409 CDK2AP2O75956 126 aa6.63□□□□□ -1.35
SCG2-201ENST00000305409 PLA2G1BP04054 148 aaKnown RBP6.63□□□□□ -1.35
SCG2-201ENST00000305409 SSBP3-AS1Q7Z2R9 100 aa6.63□□□□□ -1.35
SCG2-201ENST00000305409 RBM12B-AS1Q9P1G2 102 aa6.63□□□□□ -1.35
SCG2-201ENST00000305409 RYR3Q15413 4870 aa6.62□□□□□ -1.35
SCG2-201ENST00000305409 MPLKIPQ8TAP9 179 aa6.62□□□□□ -1.35
SCG2-201ENST00000305409 C8orf17Q9NRJ1 99 aa6.62□□□□□ -1.35
SCG2-201ENST00000305409 A0A1B0GVX0 72 aa6.61□□□□□ -1.35
SCG2-201ENST00000305409 FAM229BQ4G0N7 80 aa6.6□□□□□ -1.35
SCG2-201ENST00000305409 NDUFS5O43920 106 aa6.6□□□□□ -1.35
SCG2-201ENST00000305409 LINC00208Q96KT6 92 aa6.6□□□□□ -1.35
SCG2-201ENST00000305409 PRR4Q16378 134 aa6.59□□□□□ -1.36
SCG2-201ENST00000305409 KTN1-AS1Q86SY8 53 aa6.59□□□□□ -1.36
SCG2-201ENST00000305409 H0Y9P7 68 aa6.58□□□□□ -1.36
SCG2-201ENST00000305409 PRR26Q8N8Z3 221 aa6.58□□□□□ -1.36
SCG2-201ENST00000305409 TYMSOSQ8TAI1 123 aa6.56□□□□□ -1.36
SCG2-201ENST00000305409 ZCCHC13Q8WW36 166 aaKnown RBP6.56□□□□□ -1.36
SCG2-201ENST00000305409 MP68P56378 58 aa6.55□□□□□ -1.36
SCG2-201ENST00000305409 Q1T7F1 81 aa6.55□□□□□ -1.36
SCG2-201ENST00000305409 H3BS24 57 aa6.53□□□□□ -1.36
SCG2-201ENST00000305409 ASB16-AS1Q495Z4 193 aa6.53□□□□□ -1.36
SCG2-201ENST00000305409 MRPL34Q9BQ48 92 aaKnown RBP6.53□□□□□ -1.36
SCG2-201ENST00000305409 C1orf64Q8NEQ6 169 aa6.52□□□□□ -1.37
SCG2-201ENST00000305409 TRAV22A0A0B4J277 110 aa6.51□□□□□ -1.37
SCG2-201ENST00000305409 RETNLBQ9BQ08 111 aa6.5□□□□□ -1.37
SCG2-201ENST00000305409 KRTAP10-4P60372 401 aaPredicted RBP6.49□□□□□ -1.37
SCG2-201ENST00000305409 PCOTHQ58A44 107 aa6.49□□□□□ -1.37
SCG2-201ENST00000305409 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
SCG2-201ENST00000305409 HSPG2P98160 4391 aa6.48□□□□□ -1.37
SCG2-201ENST00000305409 C8orf87E5RJ46 101 aa6.48□□□□□ -1.37
SCG2-201ENST00000305409 Q5W150 140 aa6.48□□□□□ -1.37
SCG2-201ENST00000305409 LINC00313P59037 77 aa6.47□□□□□ -1.37
SCG2-201ENST00000305409 PKHD1L1Q86WI1 4243 aa6.46□□□□□ -1.38
SCG2-201ENST00000305409 LINC00304Q8N9R0 145 aa6.46□□□□□ -1.38
SCG2-201ENST00000305409 TP53AIP1Q9HCN2 124 aa6.45□□□□□ -1.38
SCG2-201ENST00000305409 LIMD2Q9BT23 127 aa6.45□□□□□ -1.38
SCG2-201ENST00000305409 FLG2Q5D862 2391 aaPredicted RBP6.44□□□□□ -1.38
SCG2-201ENST00000305409 SPINK1P00995 79 aa6.43□□□□□ -1.38
SCG2-201ENST00000305409 KIAA1109Q2LD37 5005 aa6.42□□□□□ -1.38
SCG2-201ENST00000305409 H3BPC8 53 aa6.41□□□□□ -1.38
SCG2-201ENST00000305409 RYR1P21817 5038 aa6.4□□□□□ -1.38
SCG2-201ENST00000305409 KRTAP17-1Q9BYP8 105 aa6.39□□□□□ -1.39
SCG2-201ENST00000305409 EPPK1P58107 5090 aaKnown RBP6.39□□□□□ -1.39
SCG2-201ENST00000305409 KRTAP16-1A8MUX0 517 aa6.38□□□□□ -1.39
SCG2-201ENST00000305409 ATP11AUNQ6ZP68 121 aa6.38□□□□□ -1.39
SCG2-201ENST00000305409 A6NN06 94 aa6.38□□□□□ -1.39
SCG2-201ENST00000305409 PSPHP1O15172 72 aa6.38□□□□□ -1.39
SCG2-201ENST00000305409 LCA10Q71F78 164 aa6.38□□□□□ -1.39
SCG2-201ENST00000305409 DMBT1Q9UGM3 2413 aaPredicted RBP6.37□□□□□ -1.39
SCG2-201ENST00000305409 KRTAP13-3Q3SY46 172 aa6.37□□□□□ -1.39
SCG2-201ENST00000305409 C9orf92A6NGG3 77 aa6.36□□□□□ -1.39
SCG2-201ENST00000305409 FAM229AH3BQW9 127 aa6.36□□□□□ -1.39
SCG2-201ENST00000305409 Q5VSD8 79 aa6.36□□□□□ -1.39
SCG2-201ENST00000305409 C7orf65Q6ZTY9 151 aa6.36□□□□□ -1.39
SCG2-201ENST00000305409 Q8N9P0 234 aaPredicted RBP6.36□□□□□ -1.39
SCG2-201ENST00000305409 MYCBP2O75592 4640 aa6.35□□□□□ -1.39
SCG2-201ENST00000305409 TNXBP22105 4242 aa6.35□□□□□ -1.39
SCG2-201ENST00000305409 CYP4F30PQ9H0H9 118 aa6.34□□□□□ -1.39
SCG2-201ENST00000305409 Q5VV11 94 aa6.34□□□□□ -1.39
SCG2-201ENST00000305409 SPAG11AQ6PDA7 123 aa6.34□□□□□ -1.39
SCG2-201ENST00000305409 A8MU10 97 aa6.33□□□□□ -1.4
SCG2-201ENST00000305409 A8MUN3 132 aa6.33□□□□□ -1.4
SCG2-201ENST00000305409 SPANXA2-OT1Q8N9U9 137 aa6.32□□□□□ -1.4
SCG2-201ENST00000305409 IGLV7-46A0A075B6I9 117 aa6.31□□□□□ -1.4
SCG2-201ENST00000305409 Q8N1X5 172 aa6.31□□□□□ -1.4
SCG2-201ENST00000305409 FAT3Q8TDW7 4589 aa6.3□□□□□ -1.4
SCG2-201ENST00000305409 LOC101927531A0A1B0GV80 90 aa6.3□□□□□ -1.4
SCG2-201ENST00000305409 IGKV2D-30A0A075B6S6 120 aa6.29□□□□□ -1.4
SCG2-201ENST00000305409 IGKV2-30P06310 120 aa6.29□□□□□ -1.4
SCG2-201ENST00000305409 RPS29P62273 56 aaKnown RBP6.28□□□□□ -1.4
SCG2-201ENST00000305409 SPTSSBQ8NFR3 76 aa6.27□□□□□ -1.41
SCG2-201ENST00000305409 COA5Q86WW8 74 aa6.27□□□□□ -1.41
SCG2-201ENST00000305409 CHKB-CPT1BH3BT56 60 aa6.26□□□□□ -1.41
SCG2-201ENST00000305409 HRES1P13985 223 aa6.26□□□□□ -1.41
SCG2-201ENST00000305409 Q75L30 129 aa6.22□□□□□ -1.41
SCG2-201ENST00000305409 KRTAP10-8P60410 259 aa6.22□□□□□ -1.41
SCG2-201ENST00000305409 CDC42SE1Q9NRR8 79 aa6.21□□□□□ -1.41
SCG2-201ENST00000305409 LINC01554Q52M75 96 aa6.19□□□□□ -1.42
SCG2-201ENST00000305409 A6NED7 52 aa6.15□□□□□ -1.42
SCG2-201ENST00000305409 PRR15LQ9BU68 103 aa6.15□□□□□ -1.42
SCG2-201ENST00000305409 KRTAP4-5Q9BYR2 181 aa6.15□□□□□ -1.42
SCG2-201ENST00000305409 A8MUU9 505 aa6.14□□□□□ -1.43
SCG2-201ENST00000305409 C20orf166-AS1Q96NR2 134 aa6.14□□□□□ -1.43
SCG2-201ENST00000305409 MT1HL1P0DM35 61 aa6.13□□□□□ -1.43
SCG2-201ENST00000305409 ACYP2P14621 99 aa6.12□□□□□ -1.43
SCG2-201ENST00000305409 DMAC1Q96GE9 116 aa6.12□□□□□ -1.43
SCG2-201ENST00000305409 ABCA13Q86UQ4 5058 aa6.09□□□□□ -1.43
SCG2-201ENST00000305409 SPINK7P58062 85 aa6.07□□□□□ -1.44
SCG2-201ENST00000305409 LPAP08519 4548 aa6.06□□□□□ -1.44
SCG2-201ENST00000305409 LRP2P98164 4655 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms