RNA–Protein interactions for RNA: ENST00000305354.4

TM4SF4-201, Transcript of transmembrane 4 L six family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF4, Length 2,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4-201ENST00000305354 KRTAP10-1P60331 282 aa9.02□□□□□ -0.97
TM4SF4-201ENST00000305354 MPLKIPQ8TAP9 179 aa9.02□□□□□ -0.97
TM4SF4-201ENST00000305354 NDUFS5O43920 106 aa9□□□□□ -0.97
TM4SF4-201ENST00000305354 C8orf87E5RJ46 101 aa8.98□□□□□ -0.97
TM4SF4-201ENST00000305354 Q1T7F1 81 aa8.98□□□□□ -0.97
TM4SF4-201ENST00000305354 SPINK6Q6UWN8 80 aa8.98□□□□□ -0.97
TM4SF4-201ENST00000305354 PKD1P98161 4303 aa8.97□□□□□ -0.97
TM4SF4-201ENST00000305354 FAT2Q9NYQ8 4349 aa8.97□□□□□ -0.97
TM4SF4-201ENST00000305354 IGLV7-46A0A075B6I9 117 aa8.97□□□□□ -0.97
TM4SF4-201ENST00000305354 A0A087X002 238 aa8.96□□□□□ -0.97
TM4SF4-201ENST00000305354 NOTCH2NLQ7Z3S9 236 aa8.96□□□□□ -0.97
TM4SF4-201ENST00000305354 KRTAP13-2Q52LG2 175 aa8.94□□□□□ -0.98
TM4SF4-201ENST00000305354 LINC00336Q6ZUF6 198 aa8.94□□□□□ -0.98
TM4SF4-201ENST00000305354 V9GYY9 64 aa8.92□□□□□ -0.98
TM4SF4-201ENST00000305354 LOC101927531A0A1B0GV80 90 aa8.9□□□□□ -0.98
TM4SF4-201ENST00000305354 LRP1BQ9NZR2 4599 aa8.9□□□□□ -0.98
TM4SF4-201ENST00000305354 PCOTHQ58A44 107 aa8.9□□□□□ -0.99
TM4SF4-201ENST00000305354 PRO0628Q9UI54 55 aa8.9□□□□□ -0.99
TM4SF4-201ENST00000305354 KRTAP1-4P0C5Y4 121 aa8.89□□□□□ -0.99
TM4SF4-201ENST00000305354 LIMD2Q9BT23 127 aa8.88□□□□□ -0.99
TM4SF4-201ENST00000305354 KRTAP13-3Q3SY46 172 aa8.87□□□□□ -0.99
TM4SF4-201ENST00000305354 HYDINQ4G0P3 5121 aa8.87□□□□□ -0.99
TM4SF4-201ENST00000305354 C1orf195Q5TG92 126 aa8.87□□□□□ -0.99
TM4SF4-201ENST00000305354 LINC00313P59037 77 aa8.86□□□□□ -0.99
TM4SF4-201ENST00000305354 COA5Q86WW8 74 aa8.86□□□□□ -0.99
TM4SF4-201ENST00000305354 Q5W150 140 aa8.83□□□□□ -1
TM4SF4-201ENST00000305354 BRK1Q8WUW1 75 aa8.82□□□□□ -1
TM4SF4-201ENST00000305354 Q8N9P0 234 aaPredicted RBP8.81□□□□□ -1
TM4SF4-201ENST00000305354 FAM229AH3BQW9 127 aa8.8□□□□□ -1
TM4SF4-201ENST00000305354 PLA2G1BP04054 148 aaKnown RBP8.79□□□□□ -1
TM4SF4-201ENST00000305354 C4orf48Q5BLP8 95 aa8.79□□□□□ -1
TM4SF4-201ENST00000305354 TYMSOSQ8TAI1 123 aa8.78□□□□□ -1
TM4SF4-201ENST00000305354 VPS13BQ7Z7G8 4022 aa8.77□□□□□ -1
TM4SF4-201ENST00000305354 PSPHP1O15172 72 aa8.77□□□□□ -1.01
TM4SF4-201ENST00000305354 SPINK1P00995 79 aa8.77□□□□□ -1.01
TM4SF4-201ENST00000305354 KRTAP16-1A8MUX0 517 aa8.75□□□□□ -1.01
TM4SF4-201ENST00000305354 SACSQ9NZJ4 4579 aa8.74□□□□□ -1.01
TM4SF4-201ENST00000305354 A8MUN3 132 aa8.74□□□□□ -1.01
TM4SF4-201ENST00000305354 HRES1P13985 223 aa8.73□□□□□ -1.01
TM4SF4-201ENST00000305354 RPS29P62273 56 aaKnown RBP8.72□□□□□ -1.01
TM4SF4-201ENST00000305354 Q5VV11 94 aa8.71□□□□□ -1.01
TM4SF4-201ENST00000305354 IGKV2-30P06310 120 aa8.69□□□□□ -1.02
TM4SF4-201ENST00000305354 SPAG11AQ6PDA7 123 aa8.69□□□□□ -1.02
TM4SF4-201ENST00000305354 PRR15LQ9BU68 103 aa8.68□□□□□ -1.02
TM4SF4-201ENST00000305354 LINC00304Q8N9R0 145 aa8.67□□□□□ -1.02
TM4SF4-201ENST00000305354 PKHD1P08F94 4074 aa8.66□□□□□ -1.02
TM4SF4-201ENST00000305354 A0A1B0GVY2 172 aa8.66□□□□□ -1.02
TM4SF4-201ENST00000305354 ACYP2P14621 99 aa8.66□□□□□ -1.02
TM4SF4-201ENST00000305354 LINC01558Q9Y6Z2 57 aa8.66□□□□□ -1.02
TM4SF4-201ENST00000305354 Q75L30 129 aa8.65□□□□□ -1.03
TM4SF4-201ENST00000305354 DMAC1Q96GE9 116 aa8.65□□□□□ -1.03
TM4SF4-201ENST00000305354 PRR26Q8N8Z3 221 aa8.64□□□□□ -1.03
TM4SF4-201ENST00000305354 DYNC1H1Q14204 4646 aaKnown RBP8.64□□□□□ -1.03
TM4SF4-201ENST00000305354 RETNLBQ9BQ08 111 aa8.63□□□□□ -1.03
TM4SF4-201ENST00000305354 CHKB-CPT1BH3BT56 60 aa8.62□□□□□ -1.03
TM4SF4-201ENST00000305354 SMR3BP02814 79 aaPredicted RBP8.58□□□□□ -1.04
TM4SF4-201ENST00000305354 KRTAP10-4P60372 401 aaPredicted RBP8.56□□□□□ -1.04
TM4SF4-201ENST00000305354 APOBP04114 4563 aaKnown RBP8.55□□□□□ -1.04
TM4SF4-201ENST00000305354 IGKV2D-30A0A075B6S6 120 aa8.54□□□□□ -1.04
TM4SF4-201ENST00000305354 PKHD1L1Q86WI1 4243 aa8.52□□□□□ -1.04
TM4SF4-201ENST00000305354 A6NED7 52 aa8.51□□□□□ -1.05
TM4SF4-201ENST00000305354 C7orf65Q6ZTY9 151 aa8.48□□□□□ -1.05
TM4SF4-201ENST00000305354 RYR2Q92736 4967 aa8.47□□□□□ -1.05
TM4SF4-201ENST00000305354 FAT1Q14517 4588 aa8.45□□□□□ -1.06
TM4SF4-201ENST00000305354 CDC42SE1Q9NRR8 79 aa8.45□□□□□ -1.06
TM4SF4-201ENST00000305354 A8MUU9 505 aa8.44□□□□□ -1.06
TM4SF4-201ENST00000305354 LCA10Q71F78 164 aa8.44□□□□□ -1.06
TM4SF4-201ENST00000305354 C20orf166-AS1Q96NR2 134 aa8.44□□□□□ -1.06
TM4SF4-201ENST00000305354 A8MU10 97 aa8.42□□□□□ -1.06
TM4SF4-201ENST00000305354 ATP11AUNQ6ZP68 121 aa8.41□□□□□ -1.06
TM4SF4-201ENST00000305354 SPINK7P58062 85 aa8.39□□□□□ -1.07
TM4SF4-201ENST00000305354 C9orf92A6NGG3 77 aa8.38□□□□□ -1.07
TM4SF4-201ENST00000305354 A0A1B0GU69 56 aa8.36□□□□□ -1.07
TM4SF4-201ENST00000305354 PMAIP1Q13794 54 aa8.34□□□□□ -1.07
TM4SF4-201ENST00000305354 SPTSSBQ8NFR3 76 aa8.33□□□□□ -1.08
TM4SF4-201ENST00000305354 Q8N1X5 172 aa8.3□□□□□ -1.08
TM4SF4-201ENST00000305354 KMT2CQ8NEZ4 4911 aaKnown RBP8.29□□□□□ -1.08
TM4SF4-201ENST00000305354 KRTAP10-8P60410 259 aa8.25□□□□□ -1.09
TM4SF4-201ENST00000305354 FLG2Q5D862 2391 aaPredicted RBP8.25□□□□□ -1.09
TM4SF4-201ENST00000305354 A6NN06 94 aa8.23□□□□□ -1.09
TM4SF4-201ENST00000305354 Q5VSD8 79 aa8.23□□□□□ -1.09
TM4SF4-201ENST00000305354 UQCR11O14957 56 aa8.2□□□□□ -1.1
TM4SF4-201ENST00000305354 SPATA8Q6RVD6 105 aa8.2□□□□□ -1.1
TM4SF4-201ENST00000305354 TNXBP22105 4242 aa8.2□□□□□ -1.1
TM4SF4-201ENST00000305354 FAT3Q8TDW7 4589 aa8.19□□□□□ -1.1
TM4SF4-201ENST00000305354 HSPG2P98160 4391 aa8.19□□□□□ -1.1
TM4SF4-201ENST00000305354 KTN1-AS1Q86SY8 53 aa8.17□□□□□ -1.1
TM4SF4-201ENST00000305354 SEC61GP60059 68 aa8.17□□□□□ -1.1
TM4SF4-201ENST00000305354 KRTAP3-1Q9BYR8 98 aa8.16□□□□□ -1.1
TM4SF4-201ENST00000305354 MIR22HGQ0VDD5 57 aa8.15□□□□□ -1.1
TM4SF4-201ENST00000305354 COX6B2Q6YFQ2 88 aa8.12□□□□□ -1.11
TM4SF4-201ENST00000305354 LRP1Q07954 4544 aaKnown RBP8.1□□□□□ -1.11
TM4SF4-201ENST00000305354 RYR1P21817 5038 aa8.1□□□□□ -1.11
TM4SF4-201ENST00000305354 RPL37P61927 97 aaKnown RBP8.09□□□□□ -1.11
TM4SF4-201ENST00000305354 RYR3Q15413 4870 aa8.05□□□□□ -1.12
TM4SF4-201ENST00000305354 XP32Q5T750 250 aa8.03□□□□□ -1.12
TM4SF4-201ENST00000305354 MT1HL1P0DM35 61 aa7.99□□□□□ -1.13
TM4SF4-201ENST00000305354 KRTAP17-1Q9BYP8 105 aa7.98□□□□□ -1.13
TM4SF4-201ENST00000305354 DMBT1Q9UGM3 2413 aaPredicted RBP7.94□□□□□ -1.14
TM4SF4-201ENST00000305354 A0A1B0GU33 70 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms