RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ASB16-AS1Q495Z4 193 aa7.04□□□□□ -1.28
TPM3-202ENST00000302206 KRTAP13-2Q52LG2 175 aa7.04□□□□□ -1.28
TPM3-202ENST00000302206 HRCT1Q6UXD1 115 aa7.04□□□□□ -1.28
TPM3-202ENST00000302206 PRR15Q8IV56 129 aa7.04□□□□□ -1.28
TPM3-202ENST00000302206 HMCN2Q8NDA2 5059 aa7.04□□□□□ -1.28
TPM3-202ENST00000302206 DEFB116Q30KQ4 102 aa7.03□□□□□ -1.28
TPM3-202ENST00000302206 HCG22E2RYF7 251 aa7.02□□□□□ -1.29
TPM3-202ENST00000302206 Q5XG85 94 aa7.02□□□□□ -1.29
TPM3-202ENST00000302206 VPS13BQ7Z7G8 4022 aa7.02□□□□□ -1.29
TPM3-202ENST00000302206 NDUFB1O75438 58 aa7.01□□□□□ -1.29
TPM3-202ENST00000302206 KRTAP10-4P60372 401 aaPredicted RBP7.01□□□□□ -1.29
TPM3-202ENST00000302206 SMR3BP02814 79 aaPredicted RBP7□□□□□ -1.29
TPM3-202ENST00000302206 OCR1Q9BZK8 76 aa6.99□□□□□ -1.29
TPM3-202ENST00000302206 KRTAP29-1A8MX34 341 aaPredicted RBP6.97□□□□□ -1.29
TPM3-202ENST00000302206 TYMSOSQ8TAI1 123 aa6.96□□□□□ -1.3
TPM3-202ENST00000302206 LIMD2Q9BT23 127 aa6.96□□□□□ -1.3
TPM3-202ENST00000302206 A0A1B0GVX0 72 aa6.95□□□□□ -1.3
TPM3-202ENST00000302206 MMP24-AS1A0A0U1RRL7 71 aa6.94□□□□□ -1.3
TPM3-202ENST00000302206 RPS29P62273 56 aaKnown RBP6.94□□□□□ -1.3
TPM3-202ENST00000302206 CASC2Q6XLA1 102 aa6.94□□□□□ -1.3
TPM3-202ENST00000302206 SPINK1P00995 79 aa6.93□□□□□ -1.3
TPM3-202ENST00000302206 SPAG11AQ6PDA7 123 aa6.93□□□□□ -1.3
TPM3-202ENST00000302206 WFDC13Q8IUB5 93 aa6.92□□□□□ -1.3
TPM3-202ENST00000302206 C8orf17Q9NRJ1 99 aa6.92□□□□□ -1.3
TPM3-202ENST00000302206 KLKP1Q107X0 134 aa6.91□□□□□ -1.3
TPM3-202ENST00000302206 hDV103S1A0JD37 113 aa6.9□□□□□ -1.3
TPM3-202ENST00000302206 C20orf197Q8N268 126 aa6.9□□□□□ -1.3
TPM3-202ENST00000302206 PRR26Q8N8Z3 221 aa6.9□□□□□ -1.3
TPM3-202ENST00000302206 LRP1Q07954 4544 aaKnown RBP6.89□□□□□ -1.31
TPM3-202ENST00000302206 C8orf87E5RJ46 101 aa6.89□□□□□ -1.31
TPM3-202ENST00000302206 C1orf195Q5TG92 126 aa6.89□□□□□ -1.31
TPM3-202ENST00000302206 LINC00304Q8N9R0 145 aa6.89□□□□□ -1.31
TPM3-202ENST00000302206 IGHV6-1A0A0B4J1U7 121 aa6.88□□□□□ -1.31
TPM3-202ENST00000302206 C5orf47Q569G3 176 aa6.88□□□□□ -1.31
TPM3-202ENST00000302206 TMEM254Q8TBM7 123 aa6.88□□□□□ -1.31
TPM3-202ENST00000302206 A0A0U1RQV1 116 aa6.86□□□□□ -1.31
TPM3-202ENST00000302206 NDUFC1O43677 76 aa6.86□□□□□ -1.31
TPM3-202ENST00000302206 CYSTM1Q9H1C7 97 aa6.85□□□□□ -1.31
TPM3-202ENST00000302206 TP53AIP1Q9HCN2 124 aa6.85□□□□□ -1.31
TPM3-202ENST00000302206 TMEM258P61165 79 aa6.84□□□□□ -1.31
TPM3-202ENST00000302206 MRPL34Q9BQ48 92 aaKnown RBP6.84□□□□□ -1.31
TPM3-202ENST00000302206 FAT3Q8TDW7 4589 aa6.84□□□□□ -1.32
TPM3-202ENST00000302206 H3BPC8 53 aa6.83□□□□□ -1.32
TPM3-202ENST00000302206 PKHD1L1Q86WI1 4243 aa6.82□□□□□ -1.32
TPM3-202ENST00000302206 SNURFQ9Y675 71 aa6.82□□□□□ -1.32
TPM3-202ENST00000302206 H7BZZ5 65 aa6.81□□□□□ -1.32
TPM3-202ENST00000302206 MP68P56378 58 aa6.81□□□□□ -1.32
TPM3-202ENST00000302206 NOTCH2NLQ7Z3S9 236 aa6.81□□□□□ -1.32
TPM3-202ENST00000302206 ZCCHC13Q8WW36 166 aaKnown RBP6.81□□□□□ -1.32
TPM3-202ENST00000302206 RNF213Q63HN8 5207 aa6.81□□□□□ -1.32
TPM3-202ENST00000302206 LINC00313P59037 77 aa6.79□□□□□ -1.32
TPM3-202ENST00000302206 TRAV22A0A0B4J277 110 aa6.77□□□□□ -1.33
TPM3-202ENST00000302206 H0Y9P7 68 aa6.77□□□□□ -1.33
TPM3-202ENST00000302206 OXTP01178 125 aa6.76□□□□□ -1.33
TPM3-202ENST00000302206 KRTAP10-8P60410 259 aa6.76□□□□□ -1.33
TPM3-202ENST00000302206 Q8N9P0 234 aaPredicted RBP6.75□□□□□ -1.33
TPM3-202ENST00000302206 NDUFS5O43920 106 aa6.74□□□□□ -1.33
TPM3-202ENST00000302206 ATP5EP56381 51 aaPredicted RBP6.74□□□□□ -1.33
TPM3-202ENST00000302206 LRP2P98164 4655 aa6.73□□□□□ -1.33
TPM3-202ENST00000302206 KRTAP16-1A8MUX0 517 aa6.73□□□□□ -1.33
TPM3-202ENST00000302206 LINC00208Q96KT6 92 aa6.73□□□□□ -1.33
TPM3-202ENST00000302206 FAM236DA0A1B0GTK5 79 aa6.72□□□□□ -1.33
TPM3-202ENST00000302206 FAM236CP0DP71 79 aa6.72□□□□□ -1.33
TPM3-202ENST00000302206 C1orf64Q8NEQ6 169 aa6.71□□□□□ -1.34
TPM3-202ENST00000302206 RPS28P62857 69 aaKnown RBP6.69□□□□□ -1.34
TPM3-202ENST00000302206 KRTAP13-3Q3SY46 172 aa6.69□□□□□ -1.34
TPM3-202ENST00000302206 KRTAP23-1A1A580 65 aa6.67□□□□□ -1.34
TPM3-202ENST00000302206 LOC101927531A0A1B0GV80 90 aa6.65□□□□□ -1.34
TPM3-202ENST00000302206 Q5W150 140 aa6.65□□□□□ -1.34
TPM3-202ENST00000302206 SPANXA2-OT1Q8N9U9 137 aa6.65□□□□□ -1.34
TPM3-202ENST00000302206 SERP1Q9Y6X1 66 aa6.64□□□□□ -1.35
TPM3-202ENST00000302206 FP248Q71RG6 208 aaPredicted RBP6.63□□□□□ -1.35
TPM3-202ENST00000302206 CYP4F30PQ9H0H9 118 aa6.62□□□□□ -1.35
TPM3-202ENST00000302206 MT1HL1P0DM35 61 aa6.61□□□□□ -1.35
TPM3-202ENST00000302206 A8MUU9 505 aa6.59□□□□□ -1.35
TPM3-202ENST00000302206 C20orf166-AS1Q96NR2 134 aa6.59□□□□□ -1.35
TPM3-202ENST00000302206 RETNLBQ9BQ08 111 aa6.58□□□□□ -1.36
TPM3-202ENST00000302206 IGLV7-46A0A075B6I9 117 aa6.57□□□□□ -1.36
TPM3-202ENST00000302206 IGKV2-30P06310 120 aa6.57□□□□□ -1.36
TPM3-202ENST00000302206 TNXBP22105 4242 aa6.57□□□□□ -1.36
TPM3-202ENST00000302206 C9orf92A6NGG3 77 aa6.55□□□□□ -1.36
TPM3-202ENST00000302206 A0A0A0MQY5 61 aa6.54□□□□□ -1.36
TPM3-202ENST00000302206 PCOTHQ58A44 107 aa6.54□□□□□ -1.36
TPM3-202ENST00000302206 Q75L30 129 aa6.52□□□□□ -1.37
TPM3-202ENST00000302206 KRTAP9-2Q9BYQ4 174 aa6.51□□□□□ -1.37
TPM3-202ENST00000302206 PRR4Q16378 134 aa6.49□□□□□ -1.37
TPM3-202ENST00000302206 SMIM26A0A096LP01 95 aa6.48□□□□□ -1.37
TPM3-202ENST00000302206 C7orf65Q6ZTY9 151 aa6.47□□□□□ -1.37
TPM3-202ENST00000302206 HRES1P13985 223 aa6.46□□□□□ -1.38
TPM3-202ENST00000302206 IGKV2D-30A0A075B6S6 120 aa6.45□□□□□ -1.38
TPM3-202ENST00000302206 LPAP08519 4548 aa6.44□□□□□ -1.38
TPM3-202ENST00000302206 KRTAP9-6A0A140TA67 174 aa6.44□□□□□ -1.38
TPM3-202ENST00000302206 RPL37P61927 97 aaKnown RBP6.42□□□□□ -1.38
TPM3-202ENST00000302206 DMAC1Q96GE9 116 aa6.42□□□□□ -1.38
TPM3-202ENST00000302206 XP32Q5T750 250 aa6.41□□□□□ -1.38
TPM3-202ENST00000302206 TPRXLQ17RH7 258 aa6.4□□□□□ -1.38
TPM3-202ENST00000302206 COA5Q86WW8 74 aa6.4□□□□□ -1.38
TPM3-202ENST00000302206 ACYP2P14621 99 aa6.39□□□□□ -1.39
TPM3-202ENST00000302206 ATP11AUNQ6ZP68 121 aa6.39□□□□□ -1.39
TPM3-202ENST00000302206 MUC2Q02817 5179 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms